EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000013624 (Gene tree)
Gene ID: 100064344
Gene Symbol: GAR1
Alias: -
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 8574 bases
Position: chr2:116414838-116423411
Accession: 18245
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000031958	Gar1	PF04410.14	1.2e-38	1	1
ENSECAP00000011412	Gar1	PF04410.14	1.5e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000014291	-	651	-	ENSECAP00000011412	216 (aa)	-	F7BNM9
ENSECAT00000057737	-	776	-	ENSECAP00000031958	197 (aa)	-	-

Gene Model

Click here to download ENSECAG00000013624's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000013624's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000013624	GAR1	55	99.083	ENSG00000109534	GAR1	51	99.091	Homo_sapiens
ENSECAG00000013624	GAR1	54	94.393	ENSAPOG00000019754	gar1	52	92.727	Acanthochromis_polyacanthus
ENSECAG00000013624	GAR1	97	96.190	ENSAMEG00000004605	GAR1	54	99.091	Ailuropoda_melanoleuca
ENSECAG00000013624	GAR1	54	94.393	ENSAOCG00000020947	gar1	51	92.727	Amphiprion_ocellaris
ENSECAG00000013624	GAR1	54	94.393	ENSAPEG00000001676	gar1	51	92.727	Amphiprion_percula
ENSECAG00000013624	GAR1	54	94.393	ENSATEG00000003733	gar1	51	92.727	Anabas_testudineus
ENSECAG00000013624	GAR1	54	89.623	ENSAPLG00000010926	GAR1	60	88.889	Anas_platyrhynchos
ENSECAG00000013624	GAR1	54	91.509	ENSACAG00000010031	GAR1	51	90.741	Anolis_carolinensis
ENSECAG00000013624	GAR1	55	99.083	ENSANAG00000021608	GAR1	50	99.091	Aotus_nancymaae
ENSECAG00000013624	GAR1	97	95.714	ENSBTAG00000000748	GAR1	99	95.714	Bos_taurus
ENSECAG00000013624	GAR1	55	99.083	ENSCJAG00000004041	GAR1	50	99.091	Callithrix_jacchus
ENSECAG00000013624	GAR1	87	96.809	ENSCAFG00020015566	GAR1	96	96.809	Canis_lupus_dingo
ENSECAG00000013624	GAR1	100	95.370	ENSCHIG00000016026	-	100	95.370	Capra_hircus
ENSECAG00000013624	GAR1	72	81.690	ENSCHIG00000011049	-	52	90.196	Capra_hircus
ENSECAG00000013624	GAR1	55	99.083	ENSTSYG00000013668	-	52	99.091	Carlito_syrichta
ENSECAG00000013624	GAR1	75	78.528	ENSTSYG00000026632	-	56	90.909	Carlito_syrichta
ENSECAG00000013624	GAR1	56	99.091	ENSCPOG00000004216	GAR1	51	99.091	Cavia_porcellus
ENSECAG00000013624	GAR1	55	99.083	ENSCCAG00000029372	GAR1	50	99.091	Cebus_capucinus
ENSECAG00000013624	GAR1	56	99.091	ENSCATG00000021854	GAR1	56	99.091	Cercocebus_atys
ENSECAG00000013624	GAR1	56	97.273	ENSCLAG00000005335	GAR1	96	96.104	Chinchilla_lanigera
ENSECAG00000013624	GAR1	54	99.065	ENSCSAG00000003922	GAR1	56	99.091	Chlorocebus_sabaeus
ENSECAG00000013624	GAR1	54	99.065	ENSCHOG00000007484	-	51	98.276	Choloepus_hoffmanni
ENSECAG00000013624	GAR1	81	87.903	ENSCPBG00000004310	GAR1	62	90.164	Chrysemys_picta_bellii
ENSECAG00000013624	GAR1	56	98.182	ENSCANG00000039262	GAR1	51	98.182	Colobus_angolensis_palliatus
ENSECAG00000013624	GAR1	55	95.413	ENSCGRG00001003919	Gar1	50	95.455	Cricetulus_griseus_chok1gshd
ENSECAG00000013624	GAR1	54	93.458	ENSCSEG00000003525	gar1	50	91.818	Cynoglossus_semilaevis
ENSECAG00000013624	GAR1	54	93.458	ENSCVAG00000002103	gar1	53	91.818	Cyprinodon_variegatus
ENSECAG00000013624	GAR1	54	91.589	ENSDARG00000076526	gar1	52	88.793	Danio_rerio
ENSECAG00000013624	GAR1	71	88.652	ENSDNOG00000037632	GAR1	56	98.182	Dasypus_novemcinctus
ENSECAG00000013624	GAR1	66	88.889	ENSDORG00000000482	Gar1	51	97.273	Dipodomys_ordii
ENSECAG00000013624	GAR1	53	59.615	FBgn0011824	CG4038	63	58.772	Drosophila_melanogaster
ENSECAG00000013624	GAR1	100	99.537	ENSEASG00005004658	GAR1	100	99.537	Equus_asinus_asinus
ENSECAG00000013624	GAR1	97	97.143	ENSFCAG00000040791	-	99	97.143	Felis_catus
ENSECAG00000013624	GAR1	82	57.857	ENSFCAG00000025841	-	57	64.706	Felis_catus
ENSECAG00000013624	GAR1	54	92.453	ENSFALG00000006445	GAR1	66	80.556	Ficedula_albicollis
ENSECAG00000013624	GAR1	56	90.991	ENSFHEG00000008068	gar1	51	90.909	Fundulus_heteroclitus
ENSECAG00000013624	GAR1	53	93.269	ENSGAGG00000004393	GAR1	62	89.344	Gopherus_agassizii
ENSECAG00000013624	GAR1	56	80.180	ENSGGOG00000036205	-	54	80.734	Gorilla_gorilla
ENSECAG00000013624	GAR1	55	98.165	ENSGGOG00000008681	GAR1	51	98.182	Gorilla_gorilla
ENSECAG00000013624	GAR1	54	99.065	ENSHGLG00000000493	GAR1	96	98.630	Heterocephalus_glaber_female
ENSECAG00000013624	GAR1	69	84.444	ENSIPUG00000003194	gar1	64	83.824	Ictalurus_punctatus
ENSECAG00000013624	GAR1	55	96.330	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSECAG00000013624	GAR1	56	90.090	ENSKMAG00000010402	gar1	69	84.138	Kryptolebias_marmoratus
ENSECAG00000013624	GAR1	62	86.607	ENSLACG00000003306	GAR1	65	87.037	Latimeria_chalumnae
ENSECAG00000013624	GAR1	55	83.333	ENSMFAG00000003572	-	54	81.818	Macaca_fascicularis
ENSECAG00000013624	GAR1	56	99.091	ENSMFAG00000024592	GAR1	51	99.091	Macaca_fascicularis
ENSECAG00000013624	GAR1	56	99.091	ENSMMUG00000021225	GAR1	51	99.091	Macaca_mulatta
ENSECAG00000013624	GAR1	56	99.091	ENSMNEG00000042594	GAR1	51	99.091	Macaca_nemestrina
ENSECAG00000013624	GAR1	56	99.091	ENSMLEG00000002496	GAR1	50	99.091	Mandrillus_leucophaeus
ENSECAG00000013624	GAR1	55	95.413	ENSMAUG00000016788	Gar1	70	98.182	Mesocricetus_auratus
ENSECAG00000013624	GAR1	57	97.321	ENSMICG00000003326	GAR1	51	98.182	Microcebus_murinus
ENSECAG00000013624	GAR1	55	96.330	ENSMOCG00000001340	Gar1	70	100.000	Microtus_ochrogaster
ENSECAG00000013624	GAR1	54	96.262	ENSMMOG00000004156	gar1	52	96.262	Mola_mola
ENSECAG00000013624	GAR1	62	82.787	ENSMALG00000009672	gar1	50	92.523	Monopterus_albus
ENSECAG00000013624	GAR1	55	95.413	MGP_CAROLIEiJ_G0025627	Gar1	70	100.000	Mus_caroli
ENSECAG00000013624	GAR1	56	95.455	ENSMUSG00000028010	Gar1	90	82.123	Mus_musculus
ENSECAG00000013624	GAR1	56	97.273	MGP_PahariEiJ_G0027076	Gar1	70	100.000	Mus_pahari
ENSECAG00000013624	GAR1	56	95.455	MGP_SPRETEiJ_G0026580	Gar1	90	82.682	Mus_spretus
ENSECAG00000013624	GAR1	97	97.619	ENSMPUG00000008615	GAR1	99	97.619	Mustela_putorius_furo
ENSECAG00000013624	GAR1	56	97.273	ENSNGAG00000008268	Gar1	99	96.053	Nannospalax_galili
ENSECAG00000013624	GAR1	70	74.453	ENSNLEG00000034282	-	56	82.727	Nomascus_leucogenys
ENSECAG00000013624	GAR1	56	99.091	ENSNLEG00000016578	GAR1	51	99.091	Nomascus_leucogenys
ENSECAG00000013624	GAR1	55	85.321	ENSOPRG00000012089	GAR1	53	80.769	Ochotona_princeps
ENSECAG00000013624	GAR1	54	98.131	ENSODEG00000011083	GAR1	57	97.273	Octodon_degus
ENSECAG00000013624	GAR1	54	94.393	ENSONIG00000001085	gar1	50	92.727	Oreochromis_niloticus
ENSECAG00000013624	GAR1	54	95.283	ENSOANG00000003665	GAR1	72	75.000	Ornithorhynchus_anatinus
ENSECAG00000013624	GAR1	55	98.165	ENSOCUG00000003901	GAR1	51	98.182	Oryctolagus_cuniculus
ENSECAG00000013624	GAR1	54	95.327	ENSORLG00000020583	gar1	50	93.636	Oryzias_latipes
ENSECAG00000013624	GAR1	54	95.327	ENSORLG00020008602	gar1	50	93.636	Oryzias_latipes_hni
ENSECAG00000013624	GAR1	54	95.327	ENSORLG00015017643	gar1	50	93.636	Oryzias_latipes_hsok
ENSECAG00000013624	GAR1	55	98.165	ENSOGAG00000004693	GAR1	52	98.182	Otolemur_garnettii
ENSECAG00000013624	GAR1	97	96.667	ENSOARG00000004910	GAR1	99	96.667	Ovis_aries
ENSECAG00000013624	GAR1	55	99.083	ENSPPAG00000014081	GAR1	55	99.091	Pan_paniscus
ENSECAG00000013624	GAR1	97	97.619	ENSPPRG00000023697	GAR1	99	97.619	Panthera_pardus
ENSECAG00000013624	GAR1	97	97.619	ENSPTIG00000021565	GAR1	99	97.619	Panthera_tigris_altaica
ENSECAG00000013624	GAR1	56	99.091	ENSPTRG00000016364	GAR1	56	99.091	Pan_troglodytes
ENSECAG00000013624	GAR1	87	81.651	ENSPTRG00000049340	-	51	80.556	Pan_troglodytes
ENSECAG00000013624	GAR1	56	99.091	ENSPANG00000000639	GAR1	51	99.091	Papio_anubis
ENSECAG00000013624	GAR1	54	93.396	ENSPKIG00000018991	gar1	63	86.429	Paramormyrops_kingsleyae
ENSECAG00000013624	GAR1	54	92.453	ENSPSIG00000002970	GAR1	62	83.824	Pelodiscus_sinensis
ENSECAG00000013624	GAR1	55	95.413	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSECAG00000013624	GAR1	54	92.523	ENSPFOG00000024155	gar1	52	90.909	Poecilia_formosa
ENSECAG00000013624	GAR1	54	92.523	ENSPLAG00000015056	gar1	52	90.909	Poecilia_latipinna
ENSECAG00000013624	GAR1	54	93.458	ENSPMEG00000009320	gar1	53	91.818	Poecilia_mexicana
ENSECAG00000013624	GAR1	65	85.816	ENSPREG00000010377	gar1	67	79.487	Poecilia_reticulata
ENSECAG00000013624	GAR1	55	99.083	ENSPPYG00000014996	GAR1	51	99.091	Pongo_abelii
ENSECAG00000013624	GAR1	94	98.387	ENSPCOG00000027049	GAR1	97	96.859	Propithecus_coquereli
ENSECAG00000013624	GAR1	97	93.839	ENSPVAG00000005992	GAR1	87	93.839	Pteropus_vampyrus
ENSECAG00000013624	GAR1	56	96.364	ENSRNOG00000061146	Gar1	64	96.364	Rattus_norvegicus
ENSECAG00000013624	GAR1	54	99.065	ENSRBIG00000019547	GAR1	56	99.091	Rhinopithecus_bieti
ENSECAG00000013624	GAR1	57	81.250	ENSRBIG00000042411	-	63	71.318	Rhinopithecus_bieti
ENSECAG00000013624	GAR1	56	99.091	ENSRROG00000028454	GAR1	56	99.091	Rhinopithecus_roxellana
ENSECAG00000013624	GAR1	57	81.250	ENSRROG00000044348	-	53	80.909	Rhinopithecus_roxellana
ENSECAG00000013624	GAR1	55	99.083	ENSSBOG00000024785	GAR1	51	99.091	Saimiri_boliviensis_boliviensis
ENSECAG00000013624	GAR1	54	91.589	ENSSMAG00000009976	gar1	50	90.000	Scophthalmus_maximus
ENSECAG00000013624	GAR1	54	93.458	ENSSLDG00000023264	gar1	52	91.818	Seriola_lalandi_dorsalis
ENSECAG00000013624	GAR1	54	93.396	ENSSPUG00000008707	GAR1	61	91.818	Sphenodon_punctatus
ENSECAG00000013624	GAR1	98	96.209	ENSSSCG00000009137	GAR1	100	96.209	Sus_scrofa
ENSECAG00000013624	GAR1	50	89.899	ENSTGUG00000004185	GAR1	67	89.899	Taeniopygia_guttata
ENSECAG00000013624	GAR1	59	89.744	ENSTRUG00000020580	gar1	65	83.088	Takifugu_rubripes
ENSECAG00000013624	GAR1	59	88.889	ENSTNIG00000013023	gar1	66	90.517	Tetraodon_nigroviridis
ENSECAG00000013624	GAR1	71	97.842	ENSUAMG00000005652	GAR1	73	97.857	Ursus_americanus
ENSECAG00000013624	GAR1	97	96.190	ENSUMAG00000000776	GAR1	53	100.000	Ursus_maritimus
ENSECAG00000013624	GAR1	97	96.667	ENSVPAG00000009844	GAR1	87	96.667	Vicugna_pacos
ENSECAG00000013624	GAR1	97	95.312	ENSVVUG00000017612	GAR1	96	96.859	Vulpes_vulpes
ENSECAG00000013624	GAR1	62	86.885	ENSXETG00000024114	gar1	67	74.830	Xenopus_tropicalis