EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000013777 (Gene tree)
Gene ID: 100065107
Gene Symbol: YBX3
Alias: -
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 21801 bases
Position: chr6:39723570-39745370
Accession: 56618
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000011703	CSD	PF00313.22	7.6e-14	1	1
ENSECAP00000031020	CSD	PF00313.22	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000014627	-	1083	-	ENSECAP00000011703	360 (aa)	-	F7BN37
ENSECAT00000056467	-	879	-	ENSECAP00000031020	292 (aa)	-	-

Gene Model

Click here to download ENSECAG00000013777's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000013777's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000013777	YBX3	68	49.327	ENSECAG00000014432	-	72	38.768

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000013777	YBX3	100	89.516	ENSG00000060138	YBX3	100	88.978	Homo_sapiens
ENSECAG00000013777	YBX3	96	90.368	ENSAMEG00000009393	YBX3	95	92.582	Ailuropoda_melanoleuca
ENSECAG00000013777	YBX3	71	88.462	ENSAPLG00000003147	YBX3	100	66.667	Anas_platyrhynchos
ENSECAG00000013777	YBX3	100	87.601	ENSANAG00000024492	-	100	87.871	Aotus_nancymaae
ENSECAG00000013777	YBX3	100	66.124	ENSANAG00000033366	-	93	81.538	Aotus_nancymaae
ENSECAG00000013777	YBX3	100	86.316	ENSBTAG00000009663	YBX3	84	90.476	Bos_taurus
ENSECAG00000013777	YBX3	100	88.949	ENSCJAG00000021660	-	100	88.410	Callithrix_jacchus
ENSECAG00000013777	YBX3	75	89.873	ENSCJAG00000033824	-	97	89.041	Callithrix_jacchus
ENSECAG00000013777	YBX3	77	94.056	ENSCAFG00000013401	YBX3	100	93.088	Canis_familiaris
ENSECAG00000013777	YBX3	100	95.604	ENSCAFG00020006412	YBX3	100	95.604	Canis_lupus_dingo
ENSECAG00000013777	YBX3	100	84.896	ENSCHIG00000010863	YBX3	89	88.715	Capra_hircus
ENSECAG00000013777	YBX3	77	93.728	ENSTSYG00000004204	-	88	92.334	Carlito_syrichta
ENSECAG00000013777	YBX3	100	74.086	ENSTSYG00000035821	-	100	71.761	Carlito_syrichta
ENSECAG00000013777	YBX3	77	87.063	ENSCAPG00000015039	YBX3	93	87.063	Cavia_aperea
ENSECAG00000013777	YBX3	79	88.014	ENSCPOG00000011329	YBX3	86	88.014	Cavia_porcellus
ENSECAG00000013777	YBX3	100	89.109	ENSCCAG00000016469	YBX3	100	88.449	Cebus_capucinus
ENSECAG00000013777	YBX3	100	88.472	ENSCATG00000034411	YBX3	100	88.204	Cercocebus_atys
ENSECAG00000013777	YBX3	77	88.112	ENSCLAG00000016030	YBX3	94	88.112	Chinchilla_lanigera
ENSECAG00000013777	YBX3	100	89.008	ENSCSAG00000008744	YBX3	100	88.472	Chlorocebus_sabaeus
ENSECAG00000013777	YBX3	98	77.049	ENSCHOG00000011988	YBX3	56	96.000	Choloepus_hoffmanni
ENSECAG00000013777	YBX3	78	77.855	ENSCPBG00000014147	YBX3	81	77.663	Chrysemys_picta_bellii
ENSECAG00000013777	YBX3	55	53.488	ENSCING00000010654	yb1/2/3	50	58.394	Ciona_intestinalis
ENSECAG00000013777	YBX3	79	89.492	ENSCANG00000036801	YBX3	94	89.831	Colobus_angolensis_palliatus
ENSECAG00000013777	YBX3	100	87.534	ENSCGRG00001016148	Ybx3	100	84.282	Cricetulus_griseus_chok1gshd
ENSECAG00000013777	YBX3	77	90.378	ENSCGRG00000004563	Ybx3	98	90.378	Cricetulus_griseus_crigri
ENSECAG00000013777	YBX3	90	82.596	ENSDORG00000009103	Ybx3	81	91.608	Dipodomys_ordii
ENSECAG00000013777	YBX3	76	81.818	ENSETEG00000002557	YBX3	99	79.930	Echinops_telfairi
ENSECAG00000013777	YBX3	100	96.944	ENSEASG00005014726	YBX3	100	96.944	Equus_asinus_asinus
ENSECAG00000013777	YBX3	76	88.732	ENSEEUG00000010415	YBX3	100	89.085	Erinaceus_europaeus
ENSECAG00000013777	YBX3	100	93.817	ENSFCAG00000027748	YBX3	100	93.817	Felis_catus
ENSECAG00000013777	YBX3	71	85.185	ENSFALG00000003661	YBX3	75	87.629	Ficedula_albicollis
ENSECAG00000013777	YBX3	77	84.615	ENSFDAG00000021192	YBX3	92	84.615	Fukomys_damarensis
ENSECAG00000013777	YBX3	72	79.452	ENSGALG00000031890	YBX3	76	78.378	Gallus_gallus
ENSECAG00000013777	YBX3	73	81.818	ENSGAGG00000017780	YBX3	77	81.532	Gopherus_agassizii
ENSECAG00000013777	YBX3	100	89.276	ENSGGOG00000001352	YBX3	100	88.740	Gorilla_gorilla
ENSECAG00000013777	YBX3	81	74.837	ENSHGLG00000014798	-	86	76.351	Heterocephalus_glaber_female
ENSECAG00000013777	YBX3	73	77.737	ENSHGLG00000015495	-	88	74.497	Heterocephalus_glaber_female
ENSECAG00000013777	YBX3	72	89.908	ENSHGLG00100003589	YBX3	87	86.697	Heterocephalus_glaber_male
ENSECAG00000013777	YBX3	93	85.174	ENSSTOG00000032577	-	94	84.320	Ictidomys_tridecemlineatus
ENSECAG00000013777	YBX3	77	85.315	ENSSTOG00000002108	-	88	85.315	Ictidomys_tridecemlineatus
ENSECAG00000013777	YBX3	79	66.554	ENSJJAG00000014239	Ybx3	96	73.864	Jaculus_jaculus
ENSECAG00000013777	YBX3	100	92.683	ENSLAFG00000017247	YBX3	100	92.683	Loxodonta_africana
ENSECAG00000013777	YBX3	100	90.489	ENSMFAG00000039369	YBX3	100	90.217	Macaca_fascicularis
ENSECAG00000013777	YBX3	87	88.615	ENSMMUG00000022469	YBX3	99	88.785	Macaca_mulatta
ENSECAG00000013777	YBX3	100	90.217	ENSMNEG00000045109	YBX3	100	89.946	Macaca_nemestrina
ENSECAG00000013777	YBX3	92	81.341	ENSMLEG00000033618	YBX3	81	90.909	Mandrillus_leucophaeus
ENSECAG00000013777	YBX3	70	87.619	ENSMGAG00000014224	YBX3	100	78.704	Meleagris_gallopavo
ENSECAG00000013777	YBX3	88	88.923	ENSMAUG00000012185	Ybx3	98	86.562	Mesocricetus_auratus
ENSECAG00000013777	YBX3	100	73.000	ENSMICG00000031459	-	86	81.429	Microcebus_murinus
ENSECAG00000013777	YBX3	100	92.703	ENSMICG00000038002	-	100	92.973	Microcebus_murinus
ENSECAG00000013777	YBX3	81	91.722	ENSMOCG00000016291	Ybx3	96	91.497	Microtus_ochrogaster
ENSECAG00000013777	YBX3	77	82.927	ENSMODG00000018248	YBX3	91	82.927	Monodelphis_domestica
ENSECAG00000013777	YBX3	100	86.992	MGP_CAROLIEiJ_G0028947	Ybx3	100	84.553	Mus_caroli
ENSECAG00000013777	YBX3	100	86.992	ENSMUSG00000030189	Ybx3	100	84.553	Mus_musculus
ENSECAG00000013777	YBX3	100	87.534	MGP_PahariEiJ_G0022709	Ybx3	100	85.095	Mus_pahari
ENSECAG00000013777	YBX3	100	87.263	MGP_SPRETEiJ_G0029994	Ybx3	100	84.824	Mus_spretus
ENSECAG00000013777	YBX3	100	78.892	ENSMPUG00000011810	YBX3	100	78.892	Mustela_putorius_furo
ENSECAG00000013777	YBX3	69	95.294	ENSMLUG00000007476	YBX3	95	95.294	Myotis_lucifugus
ENSECAG00000013777	YBX3	85	83.281	ENSNGAG00000000710	Ybx3	100	81.452	Nannospalax_galili
ENSECAG00000013777	YBX3	89	87.048	ENSNLEG00000034844	YBX3	91	85.358	Nomascus_leucogenys
ENSECAG00000013777	YBX3	54	67.943	ENSMEUG00000002507	-	81	78.488	Notamacropus_eugenii
ENSECAG00000013777	YBX3	86	83.699	ENSODEG00000017957	YBX3	94	83.699	Octodon_degus
ENSECAG00000013777	YBX3	79	87.415	ENSOCUG00000001889	YBX3	85	87.415	Oryctolagus_cuniculus
ENSECAG00000013777	YBX3	100	89.390	ENSOGAG00000013245	YBX3	100	89.390	Otolemur_garnettii
ENSECAG00000013777	YBX3	79	82.770	ENSOARG00000020919	YBX3	99	83.051	Ovis_aries
ENSECAG00000013777	YBX3	100	81.941	ENSPPAG00000039068	YBX3	82	91.186	Pan_paniscus
ENSECAG00000013777	YBX3	100	94.086	ENSPPRG00000005859	YBX3	100	94.086	Panthera_pardus
ENSECAG00000013777	YBX3	77	94.386	ENSPTIG00000005322	YBX3	81	94.386	Panthera_tigris_altaica
ENSECAG00000013777	YBX3	100	89.037	ENSPTRG00000004681	YBX3	100	88.503	Pan_troglodytes
ENSECAG00000013777	YBX3	100	88.710	ENSPANG00000010280	YBX3	100	88.441	Papio_anubis
ENSECAG00000013777	YBX3	71	82.326	ENSPSIG00000009247	YBX3	100	82.326	Pelodiscus_sinensis
ENSECAG00000013777	YBX3	82	89.024	ENSPEMG00000010391	-	85	90.667	Peromyscus_maniculatus_bairdii
ENSECAG00000013777	YBX3	87	90.031	ENSPEMG00000012132	-	99	87.500	Peromyscus_maniculatus_bairdii
ENSECAG00000013777	YBX3	69	82.869	ENSPCIG00000029949	YBX3	97	82.869	Phascolarctos_cinereus
ENSECAG00000013777	YBX3	100	89.488	ENSPPYG00000004279	YBX3	100	88.949	Pongo_abelii
ENSECAG00000013777	YBX3	78	89.965	ENSPCAG00000001397	YBX3	98	89.753	Procavia_capensis
ENSECAG00000013777	YBX3	53	70.414	ENSPCOG00000011663	YBX3	81	94.000	Propithecus_coquereli
ENSECAG00000013777	YBX3	100	79.357	ENSPVAG00000006740	YBX3	77	91.638	Pteropus_vampyrus
ENSECAG00000013777	YBX3	100	87.805	ENSRNOG00000005480	Ybx3	100	85.366	Rattus_norvegicus
ENSECAG00000013777	YBX3	100	88.140	ENSRBIG00000039208	YBX3	100	88.140	Rhinopithecus_bieti
ENSECAG00000013777	YBX3	100	90.604	ENSRROG00000029638	YBX3	100	89.933	Rhinopithecus_roxellana
ENSECAG00000013777	YBX3	82	94.595	ENSSBOG00000030573	YBX3	86	89.003	Saimiri_boliviensis_boliviensis
ENSECAG00000013777	YBX3	68	88.660	ENSSHAG00000003262	YBX3	98	79.725	Sarcophilus_harrisii
ENSECAG00000013777	YBX3	100	91.842	ENSSSCG00000000633	YBX3	100	91.842	Sus_scrofa
ENSECAG00000013777	YBX3	70	88.462	ENSTGUG00000012047	YBX3	100	64.211	Taeniopygia_guttata
ENSECAG00000013777	YBX3	100	81.892	ENSTBEG00000012570	YBX3	88	85.000	Tupaia_belangeri
ENSECAG00000013777	YBX3	71	83.969	ENSTTRG00000008045	YBX3	96	86.667	Tursiops_truncatus
ENSECAG00000013777	YBX3	74	95.604	ENSUAMG00000016662	YBX3	100	95.604	Ursus_americanus
ENSECAG00000013777	YBX3	77	94.386	ENSUMAG00000016118	YBX3	94	94.386	Ursus_maritimus
ENSECAG00000013777	YBX3	76	65.972	ENSVPAG00000000876	YBX3	100	69.258	Vicugna_pacos
ENSECAG00000013777	YBX3	74	97.761	ENSVVUG00000004956	YBX3	100	97.761	Vulpes_vulpes
ENSECAG00000013777	YBX3	72	68.326	ENSXETG00000016239	ybx3	90	66.814	Xenopus_tropicalis