EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000013847 (Gene tree)
Gene ID: 100064523
Gene Symbol: NCBP1
Alias: -
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 47949 bases
Position: chr25:4683977-4731925
Accession: 20581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000012090	MIF4G_like	PF09088.11	2.3e-36	1	1
ENSECAP00000023765	MIF4G_like	PF09088.11	2.4e-36	1	1
ENSECAP00000012090	MIF4G_like_2	PF09090.11	1.3e-84	1	1
ENSECAP00000023765	MIF4G_like_2	PF09090.11	1.4e-84	1	1
ENSECAP00000012090	MIF4G	PF02854.19	1.9e-30	1	1
ENSECAP00000023765	MIF4G	PF02854.19	1.9e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000015079	-	2373	-	ENSECAP00000012090	790 (aa)	XP_023485471	F7DG19
ENSECAT00000047971	-	2468	-	ENSECAP00000023765	793 (aa)	XP_005605698	UPI0003ACA4D9

Gene Model

Click here to download ENSECAG00000013847's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03013	RNA transport	KEGG
ecb03015	mRNA surveillance pathway	KEGG
ecb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000013847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000013847	NCBP1	100	99.241	ENSG00000136937	NCBP1	100	99.241	Homo_sapiens
ENSECAG00000013847	NCBP1	99	83.501	ENSAPOG00000008002	NCBP1	99	82.872	Acanthochromis_polyacanthus
ENSECAG00000013847	NCBP1	100	99.242	ENSAMEG00000004763	NCBP1	100	99.242	Ailuropoda_melanoleuca
ENSECAG00000013847	NCBP1	99	83.859	ENSACIG00000000274	NCBP1	99	83.228	Amphilophus_citrinellus
ENSECAG00000013847	NCBP1	99	83.627	ENSAOCG00000021148	NCBP1	99	82.997	Amphiprion_ocellaris
ENSECAG00000013847	NCBP1	99	83.627	ENSAPEG00000001701	NCBP1	99	82.997	Amphiprion_percula
ENSECAG00000013847	NCBP1	99	82.997	ENSATEG00000006929	NCBP1	99	82.620	Anabas_testudineus
ENSECAG00000013847	NCBP1	95	90.225	ENSAPLG00000016318	NCBP1	100	90.357	Anas_platyrhynchos
ENSECAG00000013847	NCBP1	100	86.891	ENSACAG00000004409	NCBP1	87	86.767	Anolis_carolinensis
ENSECAG00000013847	NCBP1	100	96.329	ENSANAG00000025744	NCBP1	99	99.301	Aotus_nancymaae
ENSECAG00000013847	NCBP1	99	82.746	ENSACLG00000014812	NCBP1	99	82.542	Astatotilapia_calliptera
ENSECAG00000013847	NCBP1	99	81.658	ENSAMXG00000016364	NCBP1	99	81.156	Astyanax_mexicanus
ENSECAG00000013847	NCBP1	100	99.114	ENSBTAG00000009732	NCBP1	100	99.114	Bos_taurus
ENSECAG00000013847	NCBP1	99	34.649	WBGene00018156	ncbp-1	99	34.155	Caenorhabditis_elegans
ENSECAG00000013847	NCBP1	100	99.241	ENSCJAG00000010840	NCBP1	100	99.559	Callithrix_jacchus
ENSECAG00000013847	NCBP1	100	99.620	ENSCAFG00000002445	NCBP1	100	99.620	Canis_familiaris
ENSECAG00000013847	NCBP1	99	98.733	ENSCAFG00020017997	NCBP1	100	99.561	Canis_lupus_dingo
ENSECAG00000013847	NCBP1	100	98.861	ENSCHIG00000020139	NCBP1	100	98.861	Capra_hircus
ENSECAG00000013847	NCBP1	51	99.252	ENSTSYG00000011914	NCBP1	99	99.688	Carlito_syrichta
ENSECAG00000013847	NCBP1	81	89.219	ENSCAPG00000014252	NCBP1	90	89.062	Cavia_aperea
ENSECAG00000013847	NCBP1	97	97.262	ENSCPOG00000012573	NCBP1	99	97.262	Cavia_porcellus
ENSECAG00000013847	NCBP1	100	99.367	ENSCCAG00000032297	NCBP1	100	99.367	Cebus_capucinus
ENSECAG00000013847	NCBP1	100	99.241	ENSCATG00000010052	NCBP1	100	99.241	Cercocebus_atys
ENSECAG00000013847	NCBP1	100	99.241	ENSCLAG00000014339	NCBP1	100	99.241	Chinchilla_lanigera
ENSECAG00000013847	NCBP1	100	99.241	ENSCSAG00000010929	NCBP1	100	99.241	Chlorocebus_sabaeus
ENSECAG00000013847	NCBP1	91	95.763	ENSCHOG00000010332	NCBP1	91	95.763	Choloepus_hoffmanni
ENSECAG00000013847	NCBP1	100	85.786	ENSCPBG00000024344	NCBP1	99	90.278	Chrysemys_picta_bellii
ENSECAG00000013847	NCBP1	99	54.235	ENSCING00000008990	-	99	54.109	Ciona_intestinalis
ENSECAG00000013847	NCBP1	99	53.074	ENSCSAVG00000005300	-	99	53.403	Ciona_savignyi
ENSECAG00000013847	NCBP1	100	99.241	ENSCANG00000036913	NCBP1	100	99.241	Colobus_angolensis_palliatus
ENSECAG00000013847	NCBP1	100	98.101	ENSCGRG00001015771	Ncbp1	100	98.101	Cricetulus_griseus_chok1gshd
ENSECAG00000013847	NCBP1	99	98.205	ENSCGRG00000010311	Ncbp1	100	98.205	Cricetulus_griseus_crigri
ENSECAG00000013847	NCBP1	99	82.872	ENSCSEG00000012377	NCBP1	99	83.217	Cynoglossus_semilaevis
ENSECAG00000013847	NCBP1	99	80.755	ENSCVAG00000008795	NCBP1	99	81.384	Cyprinodon_variegatus
ENSECAG00000013847	NCBP1	100	98.101	ENSDNOG00000006885	NCBP1	100	98.101	Dasypus_novemcinctus
ENSECAG00000013847	NCBP1	100	93.829	ENSDORG00000013652	Ncbp1	100	93.829	Dipodomys_ordii
ENSECAG00000013847	NCBP1	100	57.143	FBgn0022942	Cbp80	100	57.625	Drosophila_melanogaster
ENSECAG00000013847	NCBP1	84	33.871	FBgn0038887	CG7907	87	33.871	Drosophila_melanogaster
ENSECAG00000013847	NCBP1	89	93.450	ENSETEG00000009705	NCBP1	89	93.450	Echinops_telfairi
ENSECAG00000013847	NCBP1	100	73.333	ENSEBUG00000008386	NCBP1	100	73.082	Eptatretus_burgeri
ENSECAG00000013847	NCBP1	100	99.873	ENSEASG00005022795	NCBP1	100	99.873	Equus_asinus_asinus
ENSECAG00000013847	NCBP1	95	93.758	ENSEEUG00000015973	NCBP1	99	93.360	Erinaceus_europaeus
ENSECAG00000013847	NCBP1	99	80.629	ENSELUG00000022519	NCBP1	99	81.384	Esox_lucius
ENSECAG00000013847	NCBP1	100	99.494	ENSFCAG00000001206	NCBP1	100	99.494	Felis_catus
ENSECAG00000013847	NCBP1	98	89.059	ENSFALG00000001193	NCBP1	100	89.186	Ficedula_albicollis
ENSECAG00000013847	NCBP1	100	98.987	ENSFDAG00000010864	NCBP1	100	98.987	Fukomys_damarensis
ENSECAG00000013847	NCBP1	99	82.264	ENSFHEG00000000655	NCBP1	99	81.761	Fundulus_heteroclitus
ENSECAG00000013847	NCBP1	99	79.623	ENSGMOG00000008653	NCBP1	99	79.623	Gadus_morhua
ENSECAG00000013847	NCBP1	98	90.244	ENSGALG00000002087	NCBP1	100	89.912	Gallus_gallus
ENSECAG00000013847	NCBP1	99	82.763	ENSGAFG00000017787	NCBP1	99	82.636	Gambusia_affinis
ENSECAG00000013847	NCBP1	99	82.058	ENSGACG00000016772	NCBP1	98	81.681	Gasterosteus_aculeatus
ENSECAG00000013847	NCBP1	100	88.428	ENSGAGG00000019483	NCBP1	99	90.000	Gopherus_agassizii
ENSECAG00000013847	NCBP1	100	99.241	ENSGGOG00000001376	NCBP1	100	99.241	Gorilla_gorilla
ENSECAG00000013847	NCBP1	99	82.746	ENSHBUG00000020843	NCBP1	99	82.368	Haplochromis_burtoni
ENSECAG00000013847	NCBP1	100	86.490	ENSHGLG00000018112	-	100	86.490	Heterocephalus_glaber_female
ENSECAG00000013847	NCBP1	100	99.114	ENSHGLG00000001882	NCBP1	100	99.114	Heterocephalus_glaber_female
ENSECAG00000013847	NCBP1	100	86.237	ENSHGLG00100017373	-	100	86.237	Heterocephalus_glaber_male
ENSECAG00000013847	NCBP1	100	99.114	ENSHGLG00100013014	NCBP1	100	99.114	Heterocephalus_glaber_male
ENSECAG00000013847	NCBP1	79	72.381	ENSHCOG00000000204	NCBP1	92	72.381	Hippocampus_comes
ENSECAG00000013847	NCBP1	99	82.138	ENSIPUG00000007275	ncbp1	99	81.761	Ictalurus_punctatus
ENSECAG00000013847	NCBP1	100	99.114	ENSSTOG00000002695	NCBP1	100	99.114	Ictidomys_tridecemlineatus
ENSECAG00000013847	NCBP1	99	82.116	ENSKMAG00000003594	NCBP1	99	86.585	Kryptolebias_marmoratus
ENSECAG00000013847	NCBP1	99	80.994	ENSLBEG00000011661	NCBP1	99	80.497	Labrus_bergylta
ENSECAG00000013847	NCBP1	100	80.224	ENSLACG00000013955	NCBP1	100	79.726	Latimeria_chalumnae
ENSECAG00000013847	NCBP1	99	72.195	ENSLOCG00000009579	NCBP1	99	72.195	Lepisosteus_oculatus
ENSECAG00000013847	NCBP1	100	98.608	ENSLAFG00000005999	NCBP1	100	98.608	Loxodonta_africana
ENSECAG00000013847	NCBP1	100	99.241	ENSMFAG00000030994	NCBP1	100	99.241	Macaca_fascicularis
ENSECAG00000013847	NCBP1	99	99.230	ENSMMUG00000012281	NCBP1	99	99.230	Macaca_mulatta
ENSECAG00000013847	NCBP1	100	99.241	ENSMNEG00000042790	NCBP1	100	99.241	Macaca_nemestrina
ENSECAG00000013847	NCBP1	100	99.241	ENSMLEG00000030374	NCBP1	100	99.241	Mandrillus_leucophaeus
ENSECAG00000013847	NCBP1	99	83.249	ENSMAMG00000014806	NCBP1	99	82.494	Mastacembelus_armatus
ENSECAG00000013847	NCBP1	97	82.422	ENSMZEG00005009290	-	99	82.292	Maylandia_zebra
ENSECAG00000013847	NCBP1	99	82.746	ENSMZEG00005003469	NCBP1	99	82.368	Maylandia_zebra
ENSECAG00000013847	NCBP1	99	97.455	ENSMAUG00000020583	Ncbp1	99	98.072	Mesocricetus_auratus
ENSECAG00000013847	NCBP1	100	98.861	ENSMICG00000012682	NCBP1	100	98.861	Microcebus_murinus
ENSECAG00000013847	NCBP1	100	97.722	ENSMOCG00000015818	Ncbp1	100	97.722	Microtus_ochrogaster
ENSECAG00000013847	NCBP1	91	82.098	ENSMMOG00000002610	NCBP1	99	81.958	Mola_mola
ENSECAG00000013847	NCBP1	100	93.544	ENSMODG00000003202	NCBP1	99	93.291	Monodelphis_domestica
ENSECAG00000013847	NCBP1	99	82.368	ENSMALG00000003547	NCBP1	99	81.864	Monopterus_albus
ENSECAG00000013847	NCBP1	100	97.722	MGP_CAROLIEiJ_G0025982	Ncbp1	100	97.722	Mus_caroli
ENSECAG00000013847	NCBP1	100	97.722	ENSMUSG00000028330	Ncbp1	100	97.722	Mus_musculus
ENSECAG00000013847	NCBP1	100	97.975	MGP_PahariEiJ_G0028318	Ncbp1	100	97.975	Mus_pahari
ENSECAG00000013847	NCBP1	100	97.722	MGP_SPRETEiJ_G0026945	Ncbp1	100	97.722	Mus_spretus
ENSECAG00000013847	NCBP1	100	99.494	ENSMPUG00000006399	NCBP1	100	99.494	Mustela_putorius_furo
ENSECAG00000013847	NCBP1	99	97.818	ENSMLUG00000015201	NCBP1	100	97.818	Myotis_lucifugus
ENSECAG00000013847	NCBP1	100	97.975	ENSNGAG00000014101	Ncbp1	100	97.975	Nannospalax_galili
ENSECAG00000013847	NCBP1	76	86.344	ENSNBRG00000014674	NCBP1	97	86.344	Neolamprologus_brichardi
ENSECAG00000013847	NCBP1	100	99.241	ENSNLEG00000016909	NCBP1	100	99.241	Nomascus_leucogenys
ENSECAG00000013847	NCBP1	89	93.694	ENSMEUG00000010672	NCBP1	90	91.441	Notamacropus_eugenii
ENSECAG00000013847	NCBP1	79	100.000	ENSOPRG00000002144	-	83	100.000	Ochotona_princeps
ENSECAG00000013847	NCBP1	100	98.987	ENSODEG00000003232	NCBP1	100	98.987	Octodon_degus
ENSECAG00000013847	NCBP1	99	82.746	ENSONIG00000001502	NCBP1	99	82.368	Oreochromis_niloticus
ENSECAG00000013847	NCBP1	79	95.345	ENSOANG00000001918	NCBP1	100	95.345	Ornithorhynchus_anatinus
ENSECAG00000013847	NCBP1	98	98.329	ENSOCUG00000013853	NCBP1	97	98.329	Oryctolagus_cuniculus
ENSECAG00000013847	NCBP1	99	81.078	ENSORLG00000011008	NCBP1	99	80.702	Oryzias_latipes
ENSECAG00000013847	NCBP1	99	81.078	ENSORLG00020017455	NCBP1	99	80.702	Oryzias_latipes_hni
ENSECAG00000013847	NCBP1	99	81.203	ENSORLG00015012127	NCBP1	99	80.827	Oryzias_latipes_hsok
ENSECAG00000013847	NCBP1	99	81.704	ENSOMEG00000020698	NCBP1	99	81.579	Oryzias_melastigma
ENSECAG00000013847	NCBP1	100	99.242	ENSOGAG00000013888	NCBP1	100	99.242	Otolemur_garnettii
ENSECAG00000013847	NCBP1	100	98.861	ENSOARG00000011233	NCBP1	100	98.861	Ovis_aries
ENSECAG00000013847	NCBP1	100	99.241	ENSPPAG00000026462	NCBP1	100	99.241	Pan_paniscus
ENSECAG00000013847	NCBP1	100	99.620	ENSPPRG00000022574	NCBP1	100	99.620	Panthera_pardus
ENSECAG00000013847	NCBP1	100	99.620	ENSPTIG00000018507	NCBP1	100	99.620	Panthera_tigris_altaica
ENSECAG00000013847	NCBP1	100	99.241	ENSPTRG00000021167	NCBP1	100	99.241	Pan_troglodytes
ENSECAG00000013847	NCBP1	100	99.241	ENSPANG00000025591	NCBP1	100	99.241	Papio_anubis
ENSECAG00000013847	NCBP1	100	80.881	ENSPKIG00000015861	NCBP1	100	80.755	Paramormyrops_kingsleyae
ENSECAG00000013847	NCBP1	64	88.867	ENSPSIG00000009558	NCBP1	100	89.062	Pelodiscus_sinensis
ENSECAG00000013847	NCBP1	99	79.597	ENSPMGG00000020476	NCBP1	99	79.093	Periophthalmus_magnuspinnatus
ENSECAG00000013847	NCBP1	100	97.595	ENSPEMG00000020105	Ncbp1	100	97.595	Peromyscus_maniculatus_bairdii
ENSECAG00000013847	NCBP1	100	67.372	ENSPMAG00000005533	NCBP1	100	67.372	Petromyzon_marinus
ENSECAG00000013847	NCBP1	100	93.291	ENSPCIG00000015800	NCBP1	99	94.309	Phascolarctos_cinereus
ENSECAG00000013847	NCBP1	99	81.955	ENSPFOG00000004158	NCBP1	99	81.579	Poecilia_formosa
ENSECAG00000013847	NCBP1	99	82.390	ENSPLAG00000020002	NCBP1	99	82.013	Poecilia_latipinna
ENSECAG00000013847	NCBP1	99	82.390	ENSPMEG00000019821	NCBP1	99	82.013	Poecilia_mexicana
ENSECAG00000013847	NCBP1	99	82.286	ENSPREG00000006035	NCBP1	99	81.910	Poecilia_reticulata
ENSECAG00000013847	NCBP1	100	99.241	ENSPPYG00000019426	NCBP1	100	99.241	Pongo_abelii
ENSECAG00000013847	NCBP1	84	98.966	ENSPCAG00000009943	NCBP1	85	98.966	Procavia_capensis
ENSECAG00000013847	NCBP1	82	98.984	ENSPCOG00000020024	NCBP1	98	98.984	Propithecus_coquereli
ENSECAG00000013847	NCBP1	100	98.987	ENSPVAG00000005924	NCBP1	100	98.987	Pteropus_vampyrus
ENSECAG00000013847	NCBP1	91	82.682	ENSPNYG00000002140	NCBP1	99	82.542	Pundamilia_nyererei
ENSECAG00000013847	NCBP1	99	82.286	ENSPNAG00000027753	NCBP1	99	81.910	Pygocentrus_nattereri
ENSECAG00000013847	NCBP1	100	97.848	ENSRNOG00000023605	Ncbp1	100	97.848	Rattus_norvegicus
ENSECAG00000013847	NCBP1	100	99.241	ENSRBIG00000043175	NCBP1	100	99.241	Rhinopithecus_bieti
ENSECAG00000013847	NCBP1	100	99.241	ENSRROG00000029767	NCBP1	100	99.241	Rhinopithecus_roxellana
ENSECAG00000013847	NCBP1	100	99.367	ENSSBOG00000019378	NCBP1	100	99.367	Saimiri_boliviensis_boliviensis
ENSECAG00000013847	NCBP1	69	93.798	ENSSHAG00000015882	NCBP1	73	93.359	Sarcophilus_harrisii
ENSECAG00000013847	NCBP1	99	81.258	ENSSFOG00015001872	NCBP1	100	80.506	Scleropages_formosus
ENSECAG00000013847	NCBP1	99	81.612	ENSSMAG00000007463	NCBP1	99	81.360	Scophthalmus_maximus
ENSECAG00000013847	NCBP1	99	83.143	ENSSDUG00000007019	NCBP1	100	82.990	Seriola_dumerili
ENSECAG00000013847	NCBP1	99	82.872	ENSSLDG00000021924	NCBP1	99	82.494	Seriola_lalandi_dorsalis
ENSECAG00000013847	NCBP1	85	90.175	ENSSARG00000007274	NCBP1	87	90.175	Sorex_araneus
ENSECAG00000013847	NCBP1	100	81.772	ENSSPUG00000008609	NCBP1	100	81.772	Sphenodon_punctatus
ENSECAG00000013847	NCBP1	99	83.375	ENSSPAG00000012550	NCBP1	99	82.997	Stegastes_partitus
ENSECAG00000013847	NCBP1	100	99.367	ENSSSCG00000005366	NCBP1	100	99.367	Sus_scrofa
ENSECAG00000013847	NCBP1	100	83.522	ENSTGUG00000001472	NCBP1	100	83.648	Taeniopygia_guttata
ENSECAG00000013847	NCBP1	99	81.738	ENSTRUG00000005287	NCBP1	99	81.360	Takifugu_rubripes
ENSECAG00000013847	NCBP1	100	95.570	ENSTBEG00000004035	NCBP1	100	95.570	Tupaia_belangeri
ENSECAG00000013847	NCBP1	88	99.507	ENSTTRG00000000507	NCBP1	88	99.507	Tursiops_truncatus
ENSECAG00000013847	NCBP1	100	99.494	ENSUAMG00000005471	NCBP1	100	99.494	Ursus_americanus
ENSECAG00000013847	NCBP1	97	97.139	ENSUMAG00000011865	NCBP1	100	99.561	Ursus_maritimus
ENSECAG00000013847	NCBP1	100	95.190	ENSVPAG00000010537	NCBP1	100	95.190	Vicugna_pacos
ENSECAG00000013847	NCBP1	100	99.620	ENSVVUG00000019725	NCBP1	100	99.620	Vulpes_vulpes
ENSECAG00000013847	NCBP1	100	81.163	ENSXETG00000010179	ncbp1	100	81.163	Xenopus_tropicalis
ENSECAG00000013847	NCBP1	99	82.516	ENSXMAG00000018253	NCBP1	99	82.138	Xiphophorus_maculatus