EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000013865 (Gene tree)
Gene ID: 100068692
Gene Symbol: SRBD1
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 239077 bases
Position: chr15:54191514-54430590
Accession: 23570
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000011651	S1	PF00575.23	4.4e-09	1	1
ENSECAP00000026000	S1	PF00575.23	4.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000014562	-	3042	-	ENSECAP00000011651	1013 (aa)	XP_023475466	F6ZSQ8
ENSECAT00000039615	-	3057	-	ENSECAP00000026000	1018 (aa)	-	-

Gene Model

Click here to download ENSECAG00000013865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000013865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000013865	SRBD1	98	91.365	ENSG00000068784	SRBD1	100	91.365	Homo_sapiens
ENSECAG00000013865	SRBD1	98	51.582	ENSAPOG00000005103	si:ch211-117n7.8	94	53.611	Acanthochromis_polyacanthus
ENSECAG00000013865	SRBD1	98	93.876	ENSAMEG00000005993	SRBD1	100	93.876	Ailuropoda_melanoleuca
ENSECAG00000013865	SRBD1	81	57.770	ENSACIG00000009875	si:ch211-117n7.8	85	57.796	Amphilophus_citrinellus
ENSECAG00000013865	SRBD1	98	52.275	ENSAOCG00000024718	si:ch211-117n7.8	94	54.082	Amphiprion_ocellaris
ENSECAG00000013865	SRBD1	94	54.090	ENSAPEG00000002645	si:ch211-117n7.8	97	54.090	Amphiprion_percula
ENSECAG00000013865	SRBD1	82	58.284	ENSATEG00000010844	si:ch211-117n7.8	84	58.284	Anabas_testudineus
ENSECAG00000013865	SRBD1	98	71.557	ENSAPLG00000006313	SRBD1	100	71.414	Anas_platyrhynchos
ENSECAG00000013865	SRBD1	98	91.064	ENSANAG00000025573	SRBD1	100	91.064	Aotus_nancymaae
ENSECAG00000013865	SRBD1	98	50.288	ENSACLG00000024219	si:ch211-117n7.8	94	52.147	Astatotilapia_calliptera
ENSECAG00000013865	SRBD1	89	58.142	ENSAMXG00000004294	SRBD1	93	56.889	Astyanax_mexicanus
ENSECAG00000013865	SRBD1	98	91.365	ENSBTAG00000007508	SRBD1	99	94.304	Bos_taurus
ENSECAG00000013865	SRBD1	72	30.658	WBGene00022830	ZK973.1	91	30.921	Caenorhabditis_elegans
ENSECAG00000013865	SRBD1	98	90.462	ENSCJAG00000000727	SRBD1	100	90.462	Callithrix_jacchus
ENSECAG00000013865	SRBD1	98	93.280	ENSCAFG00000002554	SRBD1	100	93.280	Canis_familiaris
ENSECAG00000013865	SRBD1	99	89.240	ENSCAFG00020026284	SRBD1	99	92.343	Canis_lupus_dingo
ENSECAG00000013865	SRBD1	100	91.115	ENSCHIG00000016535	SRBD1	100	91.807	Capra_hircus
ENSECAG00000013865	SRBD1	98	92.685	ENSTSYG00000012797	SRBD1	100	92.685	Carlito_syrichta
ENSECAG00000013865	SRBD1	98	89.859	ENSCPOG00000004773	SRBD1	100	89.859	Cavia_porcellus
ENSECAG00000013865	SRBD1	98	91.365	ENSCCAG00000025589	SRBD1	100	91.365	Cebus_capucinus
ENSECAG00000013865	SRBD1	98	92.269	ENSCATG00000039530	SRBD1	100	92.269	Cercocebus_atys
ENSECAG00000013865	SRBD1	98	91.191	ENSCLAG00000008623	SRBD1	100	91.191	Chinchilla_lanigera
ENSECAG00000013865	SRBD1	98	92.470	ENSCSAG00000013350	SRBD1	100	92.470	Chlorocebus_sabaeus
ENSECAG00000013865	SRBD1	85	94.268	ENSCHOG00000003805	SRBD1	87	94.268	Choloepus_hoffmanni
ENSECAG00000013865	SRBD1	98	74.975	ENSCPBG00000005677	SRBD1	100	74.750	Chrysemys_picta_bellii
ENSECAG00000013865	SRBD1	77	42.366	ENSCING00000005950	-	99	42.366	Ciona_intestinalis
ENSECAG00000013865	SRBD1	78	42.893	ENSCSAVG00000000861	-	99	42.893	Ciona_savignyi
ENSECAG00000013865	SRBD1	98	91.751	ENSCANG00000016307	SRBD1	99	91.751	Colobus_angolensis_palliatus
ENSECAG00000013865	SRBD1	98	86.747	ENSCGRG00001000513	Srbd1	100	86.774	Cricetulus_griseus_chok1gshd
ENSECAG00000013865	SRBD1	98	86.747	ENSCGRG00000002283	Srbd1	100	86.774	Cricetulus_griseus_crigri
ENSECAG00000013865	SRBD1	95	51.357	ENSCSEG00000000856	si:ch211-117n7.8	94	52.277	Cynoglossus_semilaevis
ENSECAG00000013865	SRBD1	82	57.479	ENSCVAG00000020212	si:ch211-117n7.8	89	57.479	Cyprinodon_variegatus
ENSECAG00000013865	SRBD1	98	92.492	ENSDNOG00000018686	SRBD1	100	92.492	Dasypus_novemcinctus
ENSECAG00000013865	SRBD1	98	87.751	ENSDORG00000010468	Srbd1	100	87.751	Dipodomys_ordii
ENSECAG00000013865	SRBD1	92	34.905	FBgn0051156	CG31156	98	35.105	Drosophila_melanogaster
ENSECAG00000013865	SRBD1	88	82.709	ENSETEG00000000739	SRBD1	91	82.709	Echinops_telfairi
ENSECAG00000013865	SRBD1	72	48.777	ENSEBUG00000008902	si:ch211-117n7.8	96	48.777	Eptatretus_burgeri
ENSECAG00000013865	SRBD1	98	96.185	ENSEASG00005003132	SRBD1	97	99.363	Equus_asinus_asinus
ENSECAG00000013865	SRBD1	95	55.250	ENSELUG00000012592	si:ch211-117n7.8	92	55.250	Esox_lucius
ENSECAG00000013865	SRBD1	98	94.779	ENSFCAG00000005101	SRBD1	100	94.779	Felis_catus
ENSECAG00000013865	SRBD1	98	68.969	ENSFALG00000012966	SRBD1	100	68.395	Ficedula_albicollis
ENSECAG00000013865	SRBD1	96	88.706	ENSFDAG00000016670	SRBD1	98	88.993	Fukomys_damarensis
ENSECAG00000013865	SRBD1	82	58.304	ENSFHEG00000019480	si:ch211-117n7.8	82	58.304	Fundulus_heteroclitus
ENSECAG00000013865	SRBD1	50	52.360	ENSGMOG00000018010	-	100	52.360	Gadus_morhua
ENSECAG00000013865	SRBD1	98	69.920	ENSGALG00000009990	SRBD1	100	69.712	Gallus_gallus
ENSECAG00000013865	SRBD1	98	50.971	ENSGAFG00000019664	si:ch211-117n7.8	97	51.610	Gambusia_affinis
ENSECAG00000013865	SRBD1	61	61.920	ENSGACG00000010794	si:ch211-117n7.8	100	61.760	Gasterosteus_aculeatus
ENSECAG00000013865	SRBD1	82	82.036	ENSGAGG00000006166	SRBD1	99	82.036	Gopherus_agassizii
ENSECAG00000013865	SRBD1	96	91.959	ENSGGOG00000005910	SRBD1	99	91.900	Gorilla_gorilla
ENSECAG00000013865	SRBD1	83	50.414	ENSHBUG00000013207	si:ch211-117n7.8	96	47.126	Haplochromis_burtoni
ENSECAG00000013865	SRBD1	98	90.141	ENSHGLG00000018153	-	99	90.141	Heterocephalus_glaber_female
ENSECAG00000013865	SRBD1	98	89.940	ENSHGLG00100015183	-	99	89.940	Heterocephalus_glaber_male
ENSECAG00000013865	SRBD1	94	55.728	ENSIPUG00000009661	srbd1	95	56.037	Ictalurus_punctatus
ENSECAG00000013865	SRBD1	98	91.867	ENSSTOG00000005898	SRBD1	100	91.867	Ictidomys_tridecemlineatus
ENSECAG00000013865	SRBD1	98	81.162	ENSJJAG00000022244	Srbd1	100	81.162	Jaculus_jaculus
ENSECAG00000013865	SRBD1	96	51.232	ENSKMAG00000003473	si:ch211-117n7.8	94	52.577	Kryptolebias_marmoratus
ENSECAG00000013865	SRBD1	98	51.341	ENSLBEG00000027518	si:ch211-117n7.8	97	51.626	Labrus_bergylta
ENSECAG00000013865	SRBD1	83	70.602	ENSLACG00000009790	SRBD1	100	70.602	Latimeria_chalumnae
ENSECAG00000013865	SRBD1	98	57.620	ENSLOCG00000016360	si:ch211-117n7.8	97	58.800	Lepisosteus_oculatus
ENSECAG00000013865	SRBD1	98	92.570	ENSMFAG00000042026	SRBD1	100	92.570	Macaca_fascicularis
ENSECAG00000013865	SRBD1	98	92.269	ENSMMUG00000003490	SRBD1	100	92.269	Macaca_mulatta
ENSECAG00000013865	SRBD1	98	89.859	ENSMNEG00000034701	SRBD1	100	89.859	Macaca_nemestrina
ENSECAG00000013865	SRBD1	98	92.169	ENSMLEG00000000745	SRBD1	100	92.169	Mandrillus_leucophaeus
ENSECAG00000013865	SRBD1	81	56.287	ENSMAMG00000021921	si:ch211-117n7.8	85	55.776	Mastacembelus_armatus
ENSECAG00000013865	SRBD1	98	50.288	ENSMZEG00005027369	si:ch211-117n7.8	94	52.147	Maylandia_zebra
ENSECAG00000013865	SRBD1	78	75.750	ENSMGAG00000010273	SRBD1	99	75.750	Meleagris_gallopavo
ENSECAG00000013865	SRBD1	77	87.961	ENSMAUG00000013916	Srbd1	99	85.444	Mesocricetus_auratus
ENSECAG00000013865	SRBD1	98	93.775	ENSMICG00000007835	SRBD1	100	93.775	Microcebus_murinus
ENSECAG00000013865	SRBD1	98	84.639	ENSMOCG00000018716	Srbd1	100	84.639	Microtus_ochrogaster
ENSECAG00000013865	SRBD1	84	55.390	ENSMMOG00000007507	si:ch211-117n7.8	89	55.390	Mola_mola
ENSECAG00000013865	SRBD1	98	51.009	ENSMALG00000001562	si:ch211-117n7.8	93	52.664	Monopterus_albus
ENSECAG00000013865	SRBD1	98	82.831	MGP_CAROLIEiJ_G0021934	Srbd1	99	84.345	Mus_caroli
ENSECAG00000013865	SRBD1	98	82.932	ENSMUSG00000024135	Srbd1	100	82.932	Mus_musculus
ENSECAG00000013865	SRBD1	98	81.928	MGP_PahariEiJ_G0020924	Srbd1	100	81.928	Mus_pahari
ENSECAG00000013865	SRBD1	98	83.233	MGP_SPRETEiJ_G0022850	Srbd1	100	83.233	Mus_spretus
ENSECAG00000013865	SRBD1	98	90.261	ENSMLUG00000007039	SRBD1	100	90.261	Myotis_lucifugus
ENSECAG00000013865	SRBD1	98	85.044	ENSNGAG00000011893	Srbd1	100	84.653	Nannospalax_galili
ENSECAG00000013865	SRBD1	82	55.924	ENSNBRG00000012873	si:ch211-117n7.8	96	51.455	Neolamprologus_brichardi
ENSECAG00000013865	SRBD1	98	91.566	ENSNLEG00000016877	SRBD1	100	91.566	Nomascus_leucogenys
ENSECAG00000013865	SRBD1	98	87.048	ENSODEG00000012095	SRBD1	100	87.048	Octodon_degus
ENSECAG00000013865	SRBD1	94	52.405	ENSONIG00000000945	si:ch211-117n7.8	99	57.706	Oreochromis_niloticus
ENSECAG00000013865	SRBD1	98	92.570	ENSOCUG00000015385	SRBD1	100	92.570	Oryctolagus_cuniculus
ENSECAG00000013865	SRBD1	83	53.670	ENSORLG00000004427	si:ch211-117n7.8	84	53.670	Oryzias_latipes
ENSECAG00000013865	SRBD1	98	50.668	ENSORLG00020012792	si:ch211-117n7.8	84	56.357	Oryzias_latipes_hni
ENSECAG00000013865	SRBD1	83	56.372	ENSORLG00015018598	si:ch211-117n7.8	84	56.372	Oryzias_latipes_hsok
ENSECAG00000013865	SRBD1	98	48.788	ENSOMEG00000012229	si:ch211-117n7.8	93	51.393	Oryzias_melastigma
ENSECAG00000013865	SRBD1	98	86.647	ENSOGAG00000001076	SRBD1	100	86.647	Otolemur_garnettii
ENSECAG00000013865	SRBD1	98	87.003	ENSOARG00000005958	SRBD1	100	87.682	Ovis_aries
ENSECAG00000013865	SRBD1	98	91.667	ENSPPAG00000038442	SRBD1	100	91.667	Pan_paniscus
ENSECAG00000013865	SRBD1	98	94.679	ENSPPRG00000003449	SRBD1	100	94.679	Panthera_pardus
ENSECAG00000013865	SRBD1	98	94.679	ENSPTIG00000012495	SRBD1	100	94.679	Panthera_tigris_altaica
ENSECAG00000013865	SRBD1	98	91.667	ENSPTRG00000011889	SRBD1	100	91.667	Pan_troglodytes
ENSECAG00000013865	SRBD1	98	92.169	ENSPANG00000008063	SRBD1	100	92.169	Papio_anubis
ENSECAG00000013865	SRBD1	98	54.000	ENSPKIG00000021973	si:ch211-117n7.8	97	54.799	Paramormyrops_kingsleyae
ENSECAG00000013865	SRBD1	98	73.852	ENSPSIG00000008992	SRBD1	100	74.551	Pelodiscus_sinensis
ENSECAG00000013865	SRBD1	87	53.769	ENSPMGG00000013348	si:ch211-117n7.8	98	51.429	Periophthalmus_magnuspinnatus
ENSECAG00000013865	SRBD1	98	83.513	ENSPEMG00000020684	Srbd1	100	83.513	Peromyscus_maniculatus_bairdii
ENSECAG00000013865	SRBD1	97	52.204	ENSPFOG00000010650	si:ch211-117n7.8	93	53.292	Poecilia_formosa
ENSECAG00000013865	SRBD1	97	51.632	ENSPLAG00000002141	si:ch211-117n7.8	93	53.141	Poecilia_latipinna
ENSECAG00000013865	SRBD1	97	52.400	ENSPMEG00000018537	si:ch211-117n7.8	93	53.601	Poecilia_mexicana
ENSECAG00000013865	SRBD1	82	57.362	ENSPREG00000003258	si:ch211-117n7.8	85	57.362	Poecilia_reticulata
ENSECAG00000013865	SRBD1	99	83.708	ENSPPYG00000012444	SRBD1	100	83.708	Pongo_abelii
ENSECAG00000013865	SRBD1	80	82.252	ENSPCAG00000005629	SRBD1	85	82.252	Procavia_capensis
ENSECAG00000013865	SRBD1	98	80.700	ENSPCOG00000017669	SRBD1	100	80.700	Propithecus_coquereli
ENSECAG00000013865	SRBD1	98	83.635	ENSPVAG00000001782	SRBD1	100	83.635	Pteropus_vampyrus
ENSECAG00000013865	SRBD1	83	54.064	ENSPNYG00000000508	si:ch211-117n7.8	86	53.946	Pundamilia_nyererei
ENSECAG00000013865	SRBD1	95	57.010	ENSPNAG00000013492	SRBD1	95	56.804	Pygocentrus_nattereri
ENSECAG00000013865	SRBD1	98	81.526	ENSRNOG00000014720	Srbd1	99	82.229	Rattus_norvegicus
ENSECAG00000013865	SRBD1	98	91.751	ENSRBIG00000033486	SRBD1	99	91.751	Rhinopithecus_bieti
ENSECAG00000013865	SRBD1	98	91.751	ENSRROG00000041599	SRBD1	99	91.751	Rhinopithecus_roxellana
ENSECAG00000013865	SRBD1	98	90.964	ENSSBOG00000024982	SRBD1	100	90.964	Saimiri_boliviensis_boliviensis
ENSECAG00000013865	SRBD1	88	55.688	ENSSFOG00015001128	si:ch211-117n7.8	98	55.688	Scleropages_formosus
ENSECAG00000013865	SRBD1	82	57.647	ENSSMAG00000018256	si:ch211-117n7.8	82	57.697	Scophthalmus_maximus
ENSECAG00000013865	SRBD1	84	56.322	ENSSLDG00000023189	si:ch211-117n7.8	84	56.322	Seriola_lalandi_dorsalis
ENSECAG00000013865	SRBD1	98	80.020	ENSSARG00000009740	SRBD1	100	80.020	Sorex_araneus
ENSECAG00000013865	SRBD1	84	78.892	ENSSPUG00000010475	SRBD1	99	75.862	Sphenodon_punctatus
ENSECAG00000013865	SRBD1	84	53.934	ENSSPAG00000008092	-	93	51.537	Stegastes_partitus
ENSECAG00000013865	SRBD1	100	93.287	ENSSSCG00000008445	SRBD1	100	93.880	Sus_scrofa
ENSECAG00000013865	SRBD1	82	77.497	ENSTGUG00000003878	SRBD1	100	77.497	Taeniopygia_guttata
ENSECAG00000013865	SRBD1	98	50.820	ENSTRUG00000007080	si:ch211-117n7.8	98	55.286	Takifugu_rubripes
ENSECAG00000013865	SRBD1	98	50.781	ENSTNIG00000007464	si:ch211-117n7.8	97	51.259	Tetraodon_nigroviridis
ENSECAG00000013865	SRBD1	75	98.947	ENSTBEG00000004556	SRBD1	76	98.947	Tupaia_belangeri
ENSECAG00000013865	SRBD1	92	94.009	ENSTTRG00000011871	SRBD1	94	94.009	Tursiops_truncatus
ENSECAG00000013865	SRBD1	98	93.976	ENSUAMG00000008126	SRBD1	97	96.029	Ursus_americanus
ENSECAG00000013865	SRBD1	100	93.781	ENSUMAG00000012902	SRBD1	100	93.781	Ursus_maritimus
ENSECAG00000013865	SRBD1	90	94.493	ENSVPAG00000006825	SRBD1	100	94.493	Vicugna_pacos
ENSECAG00000013865	SRBD1	100	92.695	ENSVVUG00000005389	SRBD1	100	93.373	Vulpes_vulpes
ENSECAG00000013865	SRBD1	98	52.004	ENSXETG00000002760	srbd1	100	52.390	Xenopus_tropicalis
ENSECAG00000013865	SRBD1	97	51.131	ENSXMAG00000016861	si:ch211-117n7.8	93	52.778	Xiphophorus_maculatus