EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000013983 (Gene tree)
Gene ID: 100061164
Gene Symbol: PRPF6
Alias: -
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 45505 bases
Position: chr22:50662775-50708279
Accession: 21890
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000012194	PRP1_N	PF06424.12	2.3e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000015195	-	2706	-	ENSECAP00000012194	901 (aa)	-	F7C1V1

Gene Model

Click here to download ENSECAG00000013983's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000013983's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000013983	PRPF6	100	93.305	ENSG00000101161	PRPF6	100	93.305	Homo_sapiens
ENSECAG00000013983	PRPF6	100	88.629	ENSAPOG00000010395	prpf6	96	89.054	Acanthochromis_polyacanthus
ENSECAG00000013983	PRPF6	100	93.843	ENSAMEG00000001916	PRPF6	99	93.843	Ailuropoda_melanoleuca
ENSECAG00000013983	PRPF6	100	88.310	ENSACIG00000019862	prpf6	96	88.735	Amphilophus_citrinellus
ENSECAG00000013983	PRPF6	100	88.523	ENSAOCG00000012988	prpf6	96	88.948	Amphiprion_ocellaris
ENSECAG00000013983	PRPF6	100	82.040	ENSAPEG00000008301	prpf6	100	80.234	Amphiprion_percula
ENSECAG00000013983	PRPF6	100	88.204	ENSATEG00000005581	prpf6	96	88.629	Anabas_testudineus
ENSECAG00000013983	PRPF6	100	93.411	ENSACAG00000006464	PRPF6	95	93.411	Anolis_carolinensis
ENSECAG00000013983	PRPF6	100	93.411	ENSANAG00000012661	PRPF6	100	93.757	Aotus_nancymaae
ENSECAG00000013983	PRPF6	100	87.991	ENSACLG00000025875	prpf6	96	88.417	Astatotilapia_calliptera
ENSECAG00000013983	PRPF6	99	88.617	ENSAMXG00000001929	prpf6	96	89.043	Astyanax_mexicanus
ENSECAG00000013983	PRPF6	100	94.793	ENSBTAG00000011656	PRPF6	100	94.793	Bos_taurus
ENSECAG00000013983	PRPF6	100	93.411	ENSCJAG00000010616	PRPF6	100	93.411	Callithrix_jacchus
ENSECAG00000013983	PRPF6	100	94.899	ENSCAFG00000013165	PRPF6	100	94.899	Canis_familiaris
ENSECAG00000013983	PRPF6	100	94.899	ENSCAFG00020002050	PRPF6	100	94.899	Canis_lupus_dingo
ENSECAG00000013983	PRPF6	100	94.793	ENSCHIG00000018187	PRPF6	100	94.793	Capra_hircus
ENSECAG00000013983	PRPF6	100	94.049	ENSTSYG00000007814	PRPF6	100	94.049	Carlito_syrichta
ENSECAG00000013983	PRPF6	97	92.912	ENSCAPG00000015077	PRPF6	100	92.475	Cavia_aperea
ENSECAG00000013983	PRPF6	100	94.368	ENSCPOG00000007518	PRPF6	100	94.368	Cavia_porcellus
ENSECAG00000013983	PRPF6	100	90.117	ENSCCAG00000024564	PRPF6	100	90.223	Cebus_capucinus
ENSECAG00000013983	PRPF6	100	93.199	ENSCATG00000037473	PRPF6	100	93.199	Cercocebus_atys
ENSECAG00000013983	PRPF6	100	90.436	ENSCLAG00000003854	PRPF6	100	88.098	Chinchilla_lanigera
ENSECAG00000013983	PRPF6	100	88.173	ENSCSAG00000016742	PRPF6	100	88.173	Chlorocebus_sabaeus
ENSECAG00000013983	PRPF6	84	74.959	ENSCHOG00000003315	-	98	74.545	Choloepus_hoffmanni
ENSECAG00000013983	PRPF6	100	93.624	ENSCPBG00000013964	PRPF6	96	93.624	Chrysemys_picta_bellii
ENSECAG00000013983	PRPF6	99	70.402	ENSCING00000008817	-	99	70.402	Ciona_intestinalis
ENSECAG00000013983	PRPF6	100	93.199	ENSCANG00000038230	PRPF6	100	93.199	Colobus_angolensis_palliatus
ENSECAG00000013983	PRPF6	100	94.155	ENSCGRG00001022666	Prpf6	100	94.155	Cricetulus_griseus_chok1gshd
ENSECAG00000013983	PRPF6	100	82.678	ENSCSEG00000018561	prpf6	100	80.234	Cynoglossus_semilaevis
ENSECAG00000013983	PRPF6	100	88.629	ENSCVAG00000010550	prpf6	96	89.054	Cyprinodon_variegatus
ENSECAG00000013983	PRPF6	100	88.204	ENSDARG00000091367	prpf6	99	88.629	Danio_rerio
ENSECAG00000013983	PRPF6	100	93.730	ENSDNOG00000040544	PRPF6	100	93.730	Dasypus_novemcinctus
ENSECAG00000013983	PRPF6	91	92.991	ENSDORG00000005406	Prpf6	100	92.991	Dipodomys_ordii
ENSECAG00000013983	PRPF6	99	68.133	FBgn0036828	CG6841	98	68.562	Drosophila_melanogaster
ENSECAG00000013983	PRPF6	85	89.916	ENSETEG00000004447	PRPF6	85	89.474	Echinops_telfairi
ENSECAG00000013983	PRPF6	99	82.927	ENSEBUG00000008835	prpf6	99	82.927	Eptatretus_burgeri
ENSECAG00000013983	PRPF6	100	95.749	ENSEASG00005023115	PRPF6	100	95.749	Equus_asinus_asinus
ENSECAG00000013983	PRPF6	89	100.000	ENSEEUG00000000180	PRPF6	81	100.000	Erinaceus_europaeus
ENSECAG00000013983	PRPF6	100	87.141	ENSELUG00000001945	prpf6	93	87.141	Esox_lucius
ENSECAG00000013983	PRPF6	100	95.005	ENSFCAG00000001183	PRPF6	100	95.005	Felis_catus
ENSECAG00000013983	PRPF6	100	93.518	ENSFALG00000010326	-	97	93.518	Ficedula_albicollis
ENSECAG00000013983	PRPF6	100	86.079	ENSFALG00000006046	-	97	86.079	Ficedula_albicollis
ENSECAG00000013983	PRPF6	100	92.880	ENSFDAG00000006451	PRPF6	100	93.991	Fukomys_damarensis
ENSECAG00000013983	PRPF6	100	89.160	ENSFHEG00000000560	prpf6	96	89.160	Fundulus_heteroclitus
ENSECAG00000013983	PRPF6	100	85.201	ENSGMOG00000015622	prpf6	99	85.201	Gadus_morhua
ENSECAG00000013983	PRPF6	100	93.305	ENSGALG00000006001	PRPF6	100	93.305	Gallus_gallus
ENSECAG00000013983	PRPF6	100	83.847	ENSGAFG00000021109	prpf6	96	73.835	Gambusia_affinis
ENSECAG00000013983	PRPF6	100	87.035	ENSGACG00000002576	prpf6	99	87.035	Gasterosteus_aculeatus
ENSECAG00000013983	PRPF6	100	93.518	ENSGAGG00000008653	PRPF6	96	93.518	Gopherus_agassizii
ENSECAG00000013983	PRPF6	100	97.447	ENSGGOG00000016876	PRPF6	100	97.447	Gorilla_gorilla
ENSECAG00000013983	PRPF6	100	87.991	ENSHBUG00000004496	prpf6	96	88.417	Haplochromis_burtoni
ENSECAG00000013983	PRPF6	100	94.155	ENSHGLG00000009222	PRPF6	100	94.155	Heterocephalus_glaber_female
ENSECAG00000013983	PRPF6	97	94.002	ENSHGLG00100016600	PRPF6	100	94.002	Heterocephalus_glaber_male
ENSECAG00000013983	PRPF6	100	87.035	ENSHCOG00000011513	prpf6	96	87.460	Hippocampus_comes
ENSECAG00000013983	PRPF6	100	89.054	ENSIPUG00000004912	prpf6	96	89.054	Ictalurus_punctatus
ENSECAG00000013983	PRPF6	100	91.826	ENSSTOG00000002922	PRPF6	100	91.614	Ictidomys_tridecemlineatus
ENSECAG00000013983	PRPF6	100	94.368	ENSJJAG00000000836	Prpf6	100	94.368	Jaculus_jaculus
ENSECAG00000013983	PRPF6	100	88.310	ENSKMAG00000017800	prpf6	96	88.735	Kryptolebias_marmoratus
ENSECAG00000013983	PRPF6	100	87.779	ENSLBEG00000012582	prpf6	96	87.779	Labrus_bergylta
ENSECAG00000013983	PRPF6	100	90.648	ENSLOCG00000004827	prpf6	94	91.073	Lepisosteus_oculatus
ENSECAG00000013983	PRPF6	100	93.305	ENSLAFG00000005272	PRPF6	100	93.305	Loxodonta_africana
ENSECAG00000013983	PRPF6	100	93.199	ENSMFAG00000037542	PRPF6	96	99.646	Macaca_fascicularis
ENSECAG00000013983	PRPF6	91	99.308	ENSMMUG00000015558	PRPF6	98	99.308	Macaca_mulatta
ENSECAG00000013983	PRPF6	100	78.919	ENSMNEG00000045555	PRPF6	100	78.919	Macaca_nemestrina
ENSECAG00000013983	PRPF6	100	88.310	ENSMAMG00000010718	prpf6	96	88.735	Mastacembelus_armatus
ENSECAG00000013983	PRPF6	100	87.686	ENSMZEG00005015261	-	99	88.110	Maylandia_zebra
ENSECAG00000013983	PRPF6	92	87.760	ENSMZEG00005026539	prpf6	98	87.760	Maylandia_zebra
ENSECAG00000013983	PRPF6	97	93.348	ENSMGAG00000006634	PRPF6	100	93.348	Meleagris_gallopavo
ENSECAG00000013983	PRPF6	100	94.261	ENSMAUG00000013969	Prpf6	100	94.261	Mesocricetus_auratus
ENSECAG00000013983	PRPF6	87	92.944	ENSMICG00000017793	PRPF6	98	92.848	Microcebus_murinus
ENSECAG00000013983	PRPF6	100	94.368	ENSMOCG00000001701	Prpf6	100	94.368	Microtus_ochrogaster
ENSECAG00000013983	PRPF6	100	87.460	ENSMMOG00000020419	prpf6	100	87.885	Mola_mola
ENSECAG00000013983	PRPF6	97	94.328	ENSMODG00000017051	PRPF6	99	93.415	Monodelphis_domestica
ENSECAG00000013983	PRPF6	99	88.400	ENSMALG00000000089	prpf6	100	88.400	Monopterus_albus
ENSECAG00000013983	PRPF6	100	87.566	MGP_CAROLIEiJ_G0024814	Prpf6	100	98.148	Mus_caroli
ENSECAG00000013983	PRPF6	100	94.261	ENSMUSG00000002455	Prpf6	100	98.148	Mus_musculus
ENSECAG00000013983	PRPF6	100	94.261	MGP_PahariEiJ_G0026262	Prpf6	100	98.148	Mus_pahari
ENSECAG00000013983	PRPF6	100	94.261	MGP_SPRETEiJ_G0025741	Prpf6	100	98.148	Mus_spretus
ENSECAG00000013983	PRPF6	91	93.921	ENSMPUG00000008673	PRPF6	99	93.983	Mustela_putorius_furo
ENSECAG00000013983	PRPF6	100	94.474	ENSNGAG00000003365	Prpf6	100	94.474	Nannospalax_galili
ENSECAG00000013983	PRPF6	100	88.098	ENSNBRG00000015025	prpf6	96	88.523	Neolamprologus_brichardi
ENSECAG00000013983	PRPF6	100	93.199	ENSNLEG00000010208	PRPF6	96	97.699	Nomascus_leucogenys
ENSECAG00000013983	PRPF6	100	87.977	ENSMEUG00000009824	-	90	87.977	Notamacropus_eugenii
ENSECAG00000013983	PRPF6	100	94.450	ENSODEG00000004841	PRPF6	100	94.450	Octodon_degus
ENSECAG00000013983	PRPF6	100	87.991	ENSONIG00000017406	prpf6	96	88.417	Oreochromis_niloticus
ENSECAG00000013983	PRPF6	100	93.943	ENSOANG00000004920	PRPF6	100	93.943	Ornithorhynchus_anatinus
ENSECAG00000013983	PRPF6	99	92.597	ENSOCUG00000014151	PRPF6	100	92.597	Oryctolagus_cuniculus
ENSECAG00000013983	PRPF6	100	87.991	ENSORLG00000009592	prpf6	96	87.991	Oryzias_latipes
ENSECAG00000013983	PRPF6	100	88.098	ENSORLG00020001458	prpf6	96	88.098	Oryzias_latipes_hni
ENSECAG00000013983	PRPF6	100	88.098	ENSORLG00015018762	prpf6	96	88.098	Oryzias_latipes_hsok
ENSECAG00000013983	PRPF6	100	87.991	ENSOMEG00000012174	prpf6	96	88.417	Oryzias_melastigma
ENSECAG00000013983	PRPF6	100	86.306	ENSOGAG00000007573	PRPF6	100	86.306	Otolemur_garnettii
ENSECAG00000013983	PRPF6	100	94.368	ENSOARG00000008776	PRPF6	99	94.368	Ovis_aries
ENSECAG00000013983	PRPF6	100	93.305	ENSPPAG00000008686	PRPF6	96	99.646	Pan_paniscus
ENSECAG00000013983	PRPF6	100	94.899	ENSPPRG00000008497	PRPF6	100	94.899	Panthera_pardus
ENSECAG00000013983	PRPF6	97	94.766	ENSPTIG00000011184	PRPF6	97	94.766	Panthera_tigris_altaica
ENSECAG00000013983	PRPF6	100	93.305	ENSPTRG00000013765	PRPF6	96	99.646	Pan_troglodytes
ENSECAG00000013983	PRPF6	100	92.667	ENSPANG00000024135	PRPF6	100	92.667	Papio_anubis
ENSECAG00000013983	PRPF6	100	89.904	ENSPKIG00000005627	prpf6	99	90.329	Paramormyrops_kingsleyae
ENSECAG00000013983	PRPF6	93	93.424	ENSPSIG00000007717	PRPF6	100	93.424	Pelodiscus_sinensis
ENSECAG00000013983	PRPF6	100	85.987	ENSPMGG00000008925	prpf6	96	86.200	Periophthalmus_magnuspinnatus
ENSECAG00000013983	PRPF6	100	94.155	ENSPEMG00000016036	Prpf6	100	94.155	Peromyscus_maniculatus_bairdii
ENSECAG00000013983	PRPF6	99	84.272	ENSPMAG00000006144	prpf6	99	84.272	Petromyzon_marinus
ENSECAG00000013983	PRPF6	100	94.155	ENSPCIG00000017909	PRPF6	100	94.155	Phascolarctos_cinereus
ENSECAG00000013983	PRPF6	100	88.735	ENSPFOG00000006431	prpf6	96	89.160	Poecilia_formosa
ENSECAG00000013983	PRPF6	100	88.629	ENSPLAG00000005974	prpf6	96	89.054	Poecilia_latipinna
ENSECAG00000013983	PRPF6	100	88.842	ENSPMEG00000009977	prpf6	96	89.267	Poecilia_mexicana
ENSECAG00000013983	PRPF6	100	88.735	ENSPREG00000017993	prpf6	92	89.160	Poecilia_reticulata
ENSECAG00000013983	PRPF6	100	92.774	ENSPPYG00000011256	PRPF6	100	92.774	Pongo_abelii
ENSECAG00000013983	PRPF6	95	99.673	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSECAG00000013983	PRPF6	100	93.518	ENSPCOG00000016881	PRPF6	100	93.518	Propithecus_coquereli
ENSECAG00000013983	PRPF6	100	89.904	ENSPVAG00000014316	PRPF6	100	89.904	Pteropus_vampyrus
ENSECAG00000013983	PRPF6	100	71.656	ENSPNYG00000001939	prpf6	96	76.939	Pundamilia_nyererei
ENSECAG00000013983	PRPF6	100	89.054	ENSPNAG00000015606	prpf6	96	89.479	Pygocentrus_nattereri
ENSECAG00000013983	PRPF6	100	94.155	ENSRNOG00000051498	Prpf6	100	94.155	Rattus_norvegicus
ENSECAG00000013983	PRPF6	100	93.199	ENSRBIG00000043613	PRPF6	98	97.924	Rhinopithecus_bieti
ENSECAG00000013983	PRPF6	100	90.053	ENSRROG00000040969	PRPF6	98	97.924	Rhinopithecus_roxellana
ENSECAG00000013983	PRPF6	91	93.426	ENSSBOG00000020632	PRPF6	93	93.426	Saimiri_boliviensis_boliviensis
ENSECAG00000013983	PRPF6	100	94.155	ENSSHAG00000016810	PRPF6	100	94.155	Sarcophilus_harrisii
ENSECAG00000013983	PRPF6	99	90.226	ENSSFOG00015020859	prpf6	100	90.655	Scleropages_formosus
ENSECAG00000013983	PRPF6	100	87.566	ENSSMAG00000008112	prpf6	96	87.566	Scophthalmus_maximus
ENSECAG00000013983	PRPF6	100	88.204	ENSSDUG00000016142	prpf6	96	88.629	Seriola_dumerili
ENSECAG00000013983	PRPF6	100	88.204	ENSSLDG00000025283	prpf6	100	85.228	Seriola_lalandi_dorsalis
ENSECAG00000013983	PRPF6	93	91.837	ENSSPUG00000018260	PRPF6	100	91.837	Sphenodon_punctatus
ENSECAG00000013983	PRPF6	100	88.204	ENSSPAG00000015850	prpf6	96	88.629	Stegastes_partitus
ENSECAG00000013983	PRPF6	100	94.793	ENSSSCG00000029119	PRPF6	100	94.444	Sus_scrofa
ENSECAG00000013983	PRPF6	100	93.624	ENSTGUG00000007221	PRPF6	99	93.624	Taeniopygia_guttata
ENSECAG00000013983	PRPF6	100	87.354	ENSTRUG00000002920	prpf6	96	87.779	Takifugu_rubripes
ENSECAG00000013983	PRPF6	100	81.078	ENSTNIG00000017873	prpf6	100	81.501	Tetraodon_nigroviridis
ENSECAG00000013983	PRPF6	88	98.343	ENSTBEG00000005348	PRPF6	85	98.343	Tupaia_belangeri
ENSECAG00000013983	PRPF6	100	94.155	ENSTTRG00000013068	PRPF6	100	94.155	Tursiops_truncatus
ENSECAG00000013983	PRPF6	98	93.152	ENSUMAG00000021631	PRPF6	98	92.826	Ursus_maritimus
ENSECAG00000013983	PRPF6	100	94.899	ENSVVUG00000014948	PRPF6	100	94.899	Vulpes_vulpes
ENSECAG00000013983	PRPF6	100	90.967	ENSXETG00000012054	prpf6	97	91.392	Xenopus_tropicalis
ENSECAG00000013983	PRPF6	100	88.842	ENSXCOG00000008082	prpf6	96	89.267	Xiphophorus_couchianus
ENSECAG00000013983	PRPF6	100	88.842	ENSXMAG00000015581	prpf6	96	89.267	Xiphophorus_maculatus