EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000014190 (Gene tree)
Gene ID: 100064277
Gene Symbol: LARP6
Alias: -
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 22056 bases
Position: chr1:123422683-123444738
Accession: 19589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000011865	La	PF05383.17	1.3e-20	1	1
ENSECAP00000026137	La	PF05383.17	1.5e-20	1	1
ENSECAP00000035682	La	PF05383.17	1.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000053107	-	1479	-	ENSECAP00000026137	492 (aa)	XP_023510306	UPI000C9E111B
ENSECAT00000034161	-	1398	-	ENSECAP00000035682	465 (aa)	-	-
ENSECAT00000014825	-	1362	-	ENSECAP00000011865	453 (aa)	-	F7ANI7

Gene Model

Click here to download ENSECAG00000014190's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000014190's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000014190	LARP6	100	94.512	ENSG00000166173	LARP6	100	100.000	Homo_sapiens
ENSECAG00000014190	LARP6	96	59.111	ENSAPOG00000021773	larp6a	63	60.000	Acanthochromis_polyacanthus
ENSECAG00000014190	LARP6	94	92.290	ENSAMEG00000008897	LARP6	100	92.523	Ailuropoda_melanoleuca
ENSECAG00000014190	LARP6	96	59.556	ENSACIG00000005166	larp6a	86	59.551	Amphilophus_citrinellus
ENSECAG00000014190	LARP6	96	59.111	ENSAOCG00000002284	larp6a	63	60.000	Amphiprion_ocellaris
ENSECAG00000014190	LARP6	96	59.111	ENSAPEG00000008077	larp6a	84	60.000	Amphiprion_percula
ENSECAG00000014190	LARP6	96	58.889	ENSATEG00000004018	larp6a	62	59.101	Anabas_testudineus
ENSECAG00000014190	LARP6	93	70.213	ENSAPLG00000009914	LARP6	99	70.213	Anas_platyrhynchos
ENSECAG00000014190	LARP6	91	67.788	ENSACAG00000008613	LARP6	98	67.788	Anolis_carolinensis
ENSECAG00000014190	LARP6	100	94.715	ENSANAG00000024860	LARP6	100	94.715	Aotus_nancymaae
ENSECAG00000014190	LARP6	96	59.333	ENSACLG00000018561	larp6a	61	59.508	Astatotilapia_calliptera
ENSECAG00000014190	LARP6	100	56.170	ENSAMXG00000029387	larp6a	69	57.388	Astyanax_mexicanus
ENSECAG00000014190	LARP6	90	41.404	ENSAMXG00000036816	-	93	40.436	Astyanax_mexicanus
ENSECAG00000014190	LARP6	100	94.715	ENSBTAG00000003915	LARP6	100	94.715	Bos_taurus
ENSECAG00000014190	LARP6	100	94.512	ENSCJAG00000018642	-	100	94.512	Callithrix_jacchus
ENSECAG00000014190	LARP6	100	93.902	ENSCJAG00000046236	-	100	93.902	Callithrix_jacchus
ENSECAG00000014190	LARP6	94	94.353	ENSCAFG00000017616	LARP6	99	94.353	Canis_familiaris
ENSECAG00000014190	LARP6	100	92.073	ENSCAFG00020007296	LARP6	100	92.683	Canis_lupus_dingo
ENSECAG00000014190	LARP6	100	94.512	ENSCHIG00000013742	LARP6	100	94.512	Capra_hircus
ENSECAG00000014190	LARP6	94	93.176	ENSTSYG00000028124	LARP6	87	93.176	Carlito_syrichta
ENSECAG00000014190	LARP6	94	91.745	ENSCAPG00000015452	LARP6	99	91.745	Cavia_aperea
ENSECAG00000014190	LARP6	100	90.264	ENSCPOG00000022687	LARP6	100	90.264	Cavia_porcellus
ENSECAG00000014190	LARP6	100	94.309	ENSCCAG00000036320	LARP6	100	94.309	Cebus_capucinus
ENSECAG00000014190	LARP6	100	94.919	ENSCATG00000042432	LARP6	100	94.919	Cercocebus_atys
ENSECAG00000014190	LARP6	100	92.495	ENSCLAG00000007893	LARP6	100	92.495	Chinchilla_lanigera
ENSECAG00000014190	LARP6	100	94.919	ENSCSAG00000013672	LARP6	100	94.919	Chlorocebus_sabaeus
ENSECAG00000014190	LARP6	97	93.305	ENSCHOG00000003318	LARP6	100	93.305	Choloepus_hoffmanni
ENSECAG00000014190	LARP6	98	68.100	ENSCPBG00000010771	LARP6	84	69.108	Chrysemys_picta_bellii
ENSECAG00000014190	LARP6	94	95.529	ENSCANG00000025833	LARP6	100	95.529	Colobus_angolensis_palliatus
ENSECAG00000014190	LARP6	100	91.260	ENSCGRG00001024472	Larp6	100	91.260	Cricetulus_griseus_chok1gshd
ENSECAG00000014190	LARP6	100	91.260	ENSCGRG00000004527	Larp6	100	91.260	Cricetulus_griseus_crigri
ENSECAG00000014190	LARP6	96	58.797	ENSCSEG00000011196	larp6a	65	59.234	Cynoglossus_semilaevis
ENSECAG00000014190	LARP6	96	58.929	ENSCVAG00000009605	larp6a	65	59.865	Cyprinodon_variegatus
ENSECAG00000014190	LARP6	94	58.108	ENSDARG00000005355	larp6a	97	61.033	Danio_rerio
ENSECAG00000014190	LARP6	100	93.293	ENSDNOG00000042993	LARP6	100	92.886	Dasypus_novemcinctus
ENSECAG00000014190	LARP6	100	81.781	ENSDORG00000023910	Larp6	100	81.174	Dipodomys_ordii
ENSECAG00000014190	LARP6	79	91.200	ENSETEG00000020390	LARP6	78	89.695	Echinops_telfairi
ENSECAG00000014190	LARP6	100	99.797	ENSEASG00005005490	LARP6	73	99.797	Equus_asinus_asinus
ENSECAG00000014190	LARP6	96	58.407	ENSELUG00000007341	larp6a	64	58.837	Esox_lucius
ENSECAG00000014190	LARP6	100	94.309	ENSFCAG00000001361	LARP6	100	94.309	Felis_catus
ENSECAG00000014190	LARP6	97	67.494	ENSFALG00000012389	LARP6	99	65.000	Ficedula_albicollis
ENSECAG00000014190	LARP6	94	94.159	ENSFDAG00000019994	LARP6	86	92.500	Fukomys_damarensis
ENSECAG00000014190	LARP6	96	58.929	ENSFHEG00000010312	larp6a	63	59.193	Fundulus_heteroclitus
ENSECAG00000014190	LARP6	94	70.163	ENSGALG00000004046	LARP6	96	65.984	Gallus_gallus
ENSECAG00000014190	LARP6	96	58.929	ENSGAFG00000009426	larp6a	65	59.865	Gambusia_affinis
ENSECAG00000014190	LARP6	92	60.325	ENSGACG00000014622	larp6a	96	59.584	Gasterosteus_aculeatus
ENSECAG00000014190	LARP6	89	68.579	ENSGAGG00000010802	LARP6	58	69.949	Gopherus_agassizii
ENSECAG00000014190	LARP6	94	95.529	ENSGGOG00000024151	LARP6	100	95.529	Gorilla_gorilla
ENSECAG00000014190	LARP6	96	59.333	ENSHBUG00000021014	larp6a	61	59.508	Haplochromis_burtoni
ENSECAG00000014190	LARP6	100	92.121	ENSHGLG00000015112	LARP6	100	92.121	Heterocephalus_glaber_female
ENSECAG00000014190	LARP6	94	94.353	ENSHGLG00100013159	LARP6	100	94.353	Heterocephalus_glaber_male
ENSECAG00000014190	LARP6	96	57.906	ENSHCOG00000001241	larp6a	84	59.009	Hippocampus_comes
ENSECAG00000014190	LARP6	97	36.996	ENSIPUG00000002828	-	98	36.383	Ictalurus_punctatus
ENSECAG00000014190	LARP6	93	59.142	ENSIPUG00000010187	larp6	67	59.910	Ictalurus_punctatus
ENSECAG00000014190	LARP6	95	94.186	ENSSTOG00000024279	LARP6	98	94.667	Ictidomys_tridecemlineatus
ENSECAG00000014190	LARP6	100	89.228	ENSJJAG00000011013	Larp6	100	88.821	Jaculus_jaculus
ENSECAG00000014190	LARP6	96	59.911	ENSKMAG00000001702	larp6a	60	59.911	Kryptolebias_marmoratus
ENSECAG00000014190	LARP6	96	57.301	ENSLBEG00000000170	larp6a	84	57.942	Labrus_bergylta
ENSECAG00000014190	LARP6	97	65.281	ENSLACG00000018706	LARP6	90	65.000	Latimeria_chalumnae
ENSECAG00000014190	LARP6	92	41.299	ENSLACG00000002786	-	98	44.626	Latimeria_chalumnae
ENSECAG00000014190	LARP6	96	61.830	ENSLOCG00000014592	larp6a	69	60.451	Lepisosteus_oculatus
ENSECAG00000014190	LARP6	93	43.649	ENSLOCG00000008547	-	84	41.570	Lepisosteus_oculatus
ENSECAG00000014190	LARP6	97	91.818	ENSLAFG00000016343	LARP6	100	93.736	Loxodonta_africana
ENSECAG00000014190	LARP6	95	94.884	ENSMFAG00000035507	LARP6	100	95.556	Macaca_fascicularis
ENSECAG00000014190	LARP6	100	92.073	ENSMMUG00000004429	LARP6	100	91.260	Macaca_mulatta
ENSECAG00000014190	LARP6	100	94.715	ENSMNEG00000045335	LARP6	100	94.715	Macaca_nemestrina
ENSECAG00000014190	LARP6	94	95.529	ENSMLEG00000038587	LARP6	100	95.529	Mandrillus_leucophaeus
ENSECAG00000014190	LARP6	96	59.071	ENSMAMG00000005261	larp6a	63	58.407	Mastacembelus_armatus
ENSECAG00000014190	LARP6	96	59.333	ENSMZEG00005005774	larp6a	61	59.508	Maylandia_zebra
ENSECAG00000014190	LARP6	92	70.616	ENSMGAG00000005077	LARP6	99	70.616	Meleagris_gallopavo
ENSECAG00000014190	LARP6	100	91.057	ENSMAUG00000018486	Larp6	100	91.057	Mesocricetus_auratus
ENSECAG00000014190	LARP6	100	92.480	ENSMICG00000011234	LARP6	100	92.480	Microcebus_murinus
ENSECAG00000014190	LARP6	100	90.854	ENSMOCG00000010492	Larp6	100	90.854	Microtus_ochrogaster
ENSECAG00000014190	LARP6	96	60.134	ENSMMOG00000016284	larp6a	86	60.134	Mola_mola
ENSECAG00000014190	LARP6	97	75.833	ENSMODG00000009034	LARP6	94	75.362	Monodelphis_domestica
ENSECAG00000014190	LARP6	96	59.071	ENSMALG00000014439	larp6a	84	59.284	Monopterus_albus
ENSECAG00000014190	LARP6	100	91.057	MGP_CAROLIEiJ_G0032314	Larp6	100	91.057	Mus_caroli
ENSECAG00000014190	LARP6	100	91.260	ENSMUSG00000034839	Larp6	100	91.260	Mus_musculus
ENSECAG00000014190	LARP6	100	90.447	MGP_PahariEiJ_G0015180	Larp6	100	90.447	Mus_pahari
ENSECAG00000014190	LARP6	100	91.057	MGP_SPRETEiJ_G0033452	Larp6	100	91.057	Mus_spretus
ENSECAG00000014190	LARP6	94	92.991	ENSMPUG00000017086	LARP6	100	92.991	Mustela_putorius_furo
ENSECAG00000014190	LARP6	100	93.496	ENSMLUG00000010319	LARP6	100	93.496	Myotis_lucifugus
ENSECAG00000014190	LARP6	100	90.854	ENSNGAG00000014238	Larp6	100	90.854	Nannospalax_galili
ENSECAG00000014190	LARP6	96	59.333	ENSNBRG00000008120	larp6a	84	59.508	Neolamprologus_brichardi
ENSECAG00000014190	LARP6	100	94.106	ENSNLEG00000013691	LARP6	100	92.886	Nomascus_leucogenys
ENSECAG00000014190	LARP6	85	75.978	ENSMEUG00000002270	LARP6	98	66.255	Notamacropus_eugenii
ENSECAG00000014190	LARP6	78	78.409	ENSOPRG00000004868	-	100	78.409	Ochotona_princeps
ENSECAG00000014190	LARP6	100	88.235	ENSODEG00000015958	LARP6	100	88.235	Octodon_degus
ENSECAG00000014190	LARP6	96	59.111	ENSONIG00000002901	larp6a	84	59.465	Oreochromis_niloticus
ENSECAG00000014190	LARP6	94	83.255	ENSOCUG00000009306	LARP6	99	83.255	Oryctolagus_cuniculus
ENSECAG00000014190	LARP6	96	59.778	ENSORLG00000014256	larp6a	86	60.586	Oryzias_latipes
ENSECAG00000014190	LARP6	96	59.778	ENSORLG00020019657	larp6a	63	60.586	Oryzias_latipes_hni
ENSECAG00000014190	LARP6	96	59.778	ENSORLG00015017915	larp6a	63	60.586	Oryzias_latipes_hsok
ENSECAG00000014190	LARP6	96	60.222	ENSOMEG00000017049	larp6a	64	60.222	Oryzias_melastigma
ENSECAG00000014190	LARP6	100	92.073	ENSOGAG00000000522	LARP6	100	92.073	Otolemur_garnettii
ENSECAG00000014190	LARP6	94	93.692	ENSOARG00000018750	LARP6	99	93.925	Ovis_aries
ENSECAG00000014190	LARP6	94	95.529	ENSPPAG00000031247	LARP6	100	95.529	Pan_paniscus
ENSECAG00000014190	LARP6	100	93.699	ENSPPRG00000011282	LARP6	100	93.699	Panthera_pardus
ENSECAG00000014190	LARP6	94	94.353	ENSPTIG00000015318	LARP6	86	94.353	Panthera_tigris_altaica
ENSECAG00000014190	LARP6	100	94.512	ENSPTRG00000007234	LARP6	100	94.512	Pan_troglodytes
ENSECAG00000014190	LARP6	100	94.715	ENSPANG00000016362	LARP6	100	94.715	Papio_anubis
ENSECAG00000014190	LARP6	96	58.901	ENSPKIG00000004511	LARP6	67	58.913	Paramormyrops_kingsleyae
ENSECAG00000014190	LARP6	96	61.625	ENSPKIG00000020103	larp6a	84	61.851	Paramormyrops_kingsleyae
ENSECAG00000014190	LARP6	67	81.731	ENSPSIG00000009071	LARP6	91	75.652	Pelodiscus_sinensis
ENSECAG00000014190	LARP6	95	58.264	ENSPMGG00000006958	larp6a	86	59.775	Periophthalmus_magnuspinnatus
ENSECAG00000014190	LARP6	100	91.260	ENSPEMG00000012909	Larp6	100	91.260	Peromyscus_maniculatus_bairdii
ENSECAG00000014190	LARP6	99	76.074	ENSPCIG00000020765	LARP6	95	76.074	Phascolarctos_cinereus
ENSECAG00000014190	LARP6	96	59.598	ENSPFOG00000014175	larp6a	84	60.714	Poecilia_formosa
ENSECAG00000014190	LARP6	96	59.821	ENSPLAG00000011105	larp6a	62	60.762	Poecilia_latipinna
ENSECAG00000014190	LARP6	96	59.598	ENSPMEG00000011085	larp6a	63	60.314	Poecilia_mexicana
ENSECAG00000014190	LARP6	96	59.375	ENSPREG00000008067	larp6a	63	60.314	Poecilia_reticulata
ENSECAG00000014190	LARP6	100	94.512	ENSPPYG00000006604	LARP6	100	94.512	Pongo_abelii
ENSECAG00000014190	LARP6	70	93.373	ENSPCAG00000014197	LARP6	76	93.373	Procavia_capensis
ENSECAG00000014190	LARP6	100	93.089	ENSPCOG00000022934	LARP6	100	93.089	Propithecus_coquereli
ENSECAG00000014190	LARP6	100	94.919	ENSPVAG00000005618	LARP6	100	94.919	Pteropus_vampyrus
ENSECAG00000014190	LARP6	96	59.333	ENSPNYG00000009835	larp6a	84	59.508	Pundamilia_nyererei
ENSECAG00000014190	LARP6	97	56.674	ENSPNAG00000017966	larp6a	74	57.549	Pygocentrus_nattereri
ENSECAG00000014190	LARP6	100	90.447	ENSRNOG00000012438	Larp6	100	90.447	Rattus_norvegicus
ENSECAG00000014190	LARP6	98	91.959	ENSRBIG00000032902	LARP6	98	91.959	Rhinopithecus_bieti
ENSECAG00000014190	LARP6	99	94.845	ENSRROG00000043074	LARP6	99	94.845	Rhinopithecus_roxellana
ENSECAG00000014190	LARP6	94	95.294	ENSSBOG00000024190	LARP6	100	95.294	Saimiri_boliviensis_boliviensis
ENSECAG00000014190	LARP6	94	76.168	ENSSHAG00000018495	LARP6	100	76.402	Sarcophilus_harrisii
ENSECAG00000014190	LARP6	92	61.827	ENSSFOG00015023268	larp6a	82	62.911	Scleropages_formosus
ENSECAG00000014190	LARP6	95	52.510	ENSSFOG00015002254	LARP6	83	56.064	Scleropages_formosus
ENSECAG00000014190	LARP6	96	59.243	ENSSMAG00000009953	larp6a	62	59.910	Scophthalmus_maximus
ENSECAG00000014190	LARP6	96	59.424	ENSSDUG00000007438	larp6a	62	59.865	Seriola_dumerili
ENSECAG00000014190	LARP6	96	59.424	ENSSLDG00000016647	larp6a	62	59.865	Seriola_lalandi_dorsalis
ENSECAG00000014190	LARP6	93	70.379	ENSSPUG00000011312	LARP6	99	70.379	Sphenodon_punctatus
ENSECAG00000014190	LARP6	96	59.111	ENSSPAG00000020502	larp6a	63	59.111	Stegastes_partitus
ENSECAG00000014190	LARP6	100	94.309	ENSSSCG00000004974	LARP6	100	94.309	Sus_scrofa
ENSECAG00000014190	LARP6	93	69.431	ENSTGUG00000005808	LARP6	99	69.431	Taeniopygia_guttata
ENSECAG00000014190	LARP6	95	58.230	ENSTRUG00000003151	larp6a	65	60.045	Takifugu_rubripes
ENSECAG00000014190	LARP6	96	58.371	ENSTNIG00000011926	larp6a	88	59.050	Tetraodon_nigroviridis
ENSECAG00000014190	LARP6	94	91.529	ENSTBEG00000015077	LARP6	100	91.529	Tupaia_belangeri
ENSECAG00000014190	LARP6	95	90.930	ENSUAMG00000010467	LARP6	87	90.930	Ursus_americanus
ENSECAG00000014190	LARP6	94	93.692	ENSVVUG00000015227	LARP6	95	94.118	Vulpes_vulpes
ENSECAG00000014190	LARP6	96	68.721	ENSXETG00000020340	larp6	88	69.565	Xenopus_tropicalis
ENSECAG00000014190	LARP6	96	59.152	ENSXCOG00000012654	larp6a	89	60.090	Xiphophorus_couchianus
ENSECAG00000014190	LARP6	96	59.152	ENSXMAG00000021015	larp6a	60	60.090	Xiphophorus_maculatus