EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000014248 (Gene tree)
Gene ID: 100052712
Gene Symbol: SCAF4
Alias: -
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 57177 bases
Position: chr26:29816053-29873229
Accession: 52433
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000012330	RRM_1	PF00076.22	4.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000015348	-	3916	XM_023630006	ENSECAP00000012330	1141 (aa)	XP_023485774	F7CYU2

Gene Model

Click here to download ENSECAG00000014248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000014248's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000014248	SCAF4	100	93.984	ENSG00000156304	SCAF4	100	94.071	Homo_sapiens
ENSECAG00000014248	SCAF4	52	61.905	ENSAPOG00000019615	scaf4b	60	67.005	Acanthochromis_polyacanthus
ENSECAG00000014248	SCAF4	75	96.037	ENSAMEG00000014987	SCAF4	100	96.037	Ailuropoda_melanoleuca
ENSECAG00000014248	SCAF4	99	76.091	ENSAPLG00000002509	SCAF4	59	83.410	Anas_platyrhynchos
ENSECAG00000014248	SCAF4	100	63.584	ENSACAG00000002569	SCAF4	52	84.146	Anolis_carolinensis
ENSECAG00000014248	SCAF4	100	93.641	ENSANAG00000037494	SCAF4	100	93.728	Aotus_nancymaae
ENSECAG00000014248	SCAF4	100	94.668	ENSBTAG00000018855	SCAF4	100	94.493	Bos_taurus
ENSECAG00000014248	SCAF4	100	93.908	ENSCJAG00000008993	SCAF4	99	96.048	Callithrix_jacchus
ENSECAG00000014248	SCAF4	99	97.438	ENSCAFG00000008863	SCAF4	99	97.438	Canis_familiaris
ENSECAG00000014248	SCAF4	99	95.230	ENSCAFG00020026019	SCAF4	100	97.222	Canis_lupus_dingo
ENSECAG00000014248	SCAF4	100	94.251	ENSCHIG00000008385	SCAF4	100	94.077	Capra_hircus
ENSECAG00000014248	SCAF4	91	94.312	ENSTSYG00000011344	SCAF4	98	94.322	Carlito_syrichta
ENSECAG00000014248	SCAF4	100	89.215	ENSCPOG00000012443	SCAF4	100	89.387	Cavia_porcellus
ENSECAG00000014248	SCAF4	100	95.557	ENSCCAG00000033727	SCAF4	100	95.557	Cebus_capucinus
ENSECAG00000014248	SCAF4	100	93.316	ENSCATG00000030379	SCAF4	100	93.576	Cercocebus_atys
ENSECAG00000014248	SCAF4	99	91.051	ENSCLAG00000006298	SCAF4	100	90.356	Chinchilla_lanigera
ENSECAG00000014248	SCAF4	100	93.918	ENSCSAG00000009438	SCAF4	100	94.266	Chlorocebus_sabaeus
ENSECAG00000014248	SCAF4	100	94.066	ENSCANG00000029847	SCAF4	100	94.241	Colobus_angolensis_palliatus
ENSECAG00000014248	SCAF4	67	90.390	ENSCGRG00001020821	Scaf4	65	91.169	Cricetulus_griseus_chok1gshd
ENSECAG00000014248	SCAF4	68	89.548	ENSCGRG00000014360	Scaf4	100	82.348	Cricetulus_griseus_crigri
ENSECAG00000014248	SCAF4	79	53.921	ENSDARG00000077093	scaf4a	56	60.337	Danio_rerio
ENSECAG00000014248	SCAF4	100	91.601	ENSDNOG00000019014	SCAF4	94	91.689	Dasypus_novemcinctus
ENSECAG00000014248	SCAF4	96	80.995	ENSETEG00000000583	SCAF4	99	81.267	Echinops_telfairi
ENSECAG00000014248	SCAF4	100	99.825	ENSEASG00005007756	SCAF4	100	99.825	Equus_asinus_asinus
ENSECAG00000014248	SCAF4	59	52.862	ENSELUG00000002779	SCAF8	61	68.841	Esox_lucius
ENSECAG00000014248	SCAF4	100	96.954	ENSFCAG00000002228	SCAF4	100	96.954	Felis_catus
ENSECAG00000014248	SCAF4	99	89.974	ENSFDAG00000017780	SCAF4	100	89.888	Fukomys_damarensis
ENSECAG00000014248	SCAF4	100	77.285	ENSGALG00000033965	SCAF4	59	83.639	Gallus_gallus
ENSECAG00000014248	SCAF4	91	90.634	ENSGGOG00000015557	SCAF4	100	93.445	Gorilla_gorilla
ENSECAG00000014248	SCAF4	100	90.925	ENSHGLG00000010582	SCAF4	100	91.530	Heterocephalus_glaber_female
ENSECAG00000014248	SCAF4	99	90.814	ENSHGLG00100009441	SCAF4	100	91.426	Heterocephalus_glaber_male
ENSECAG00000014248	SCAF4	99	86.872	ENSSTOG00000004450	SCAF4	100	86.784	Ictidomys_tridecemlineatus
ENSECAG00000014248	SCAF4	99	89.683	ENSJJAG00000019447	Scaf4	99	89.771	Jaculus_jaculus
ENSECAG00000014248	SCAF4	97	61.491	ENSLACG00000013913	SCAF4	59	68.289	Latimeria_chalumnae
ENSECAG00000014248	SCAF4	96	57.605	ENSLOCG00000009162	scaf4a	59	66.865	Lepisosteus_oculatus
ENSECAG00000014248	SCAF4	99	93.557	ENSLAFG00000010710	SCAF4	100	93.585	Loxodonta_africana
ENSECAG00000014248	SCAF4	100	93.160	ENSMFAG00000037668	SCAF4	100	92.987	Macaca_fascicularis
ENSECAG00000014248	SCAF4	100	93.074	ENSMMUG00000001712	SCAF4	100	92.900	Macaca_mulatta
ENSECAG00000014248	SCAF4	100	93.253	ENSMNEG00000032966	SCAF4	100	92.561	Macaca_nemestrina
ENSECAG00000014248	SCAF4	99	93.263	ENSMLEG00000039674	SCAF4	100	93.526	Mandrillus_leucophaeus
ENSECAG00000014248	SCAF4	99	76.930	ENSMGAG00000014515	SCAF4	59	83.566	Meleagris_gallopavo
ENSECAG00000014248	SCAF4	99	88.506	ENSMAUG00000013307	Scaf4	100	88.594	Mesocricetus_auratus
ENSECAG00000014248	SCAF4	100	95.804	ENSMICG00000005256	SCAF4	100	95.804	Microcebus_murinus
ENSECAG00000014248	SCAF4	98	92.185	ENSMOCG00000012087	Scaf4	95	91.797	Microtus_ochrogaster
ENSECAG00000014248	SCAF4	100	85.415	ENSMODG00000021040	SCAF4	100	84.454	Monodelphis_domestica
ENSECAG00000014248	SCAF4	100	89.474	MGP_CAROLIEiJ_G0020944	Scaf4	95	89.948	Mus_caroli
ENSECAG00000014248	SCAF4	100	89.290	ENSMUSG00000022983	Scaf4	95	90.026	Mus_musculus
ENSECAG00000014248	SCAF4	66	88.351	MGP_PahariEiJ_G0016649	Scaf4	100	84.833	Mus_pahari
ENSECAG00000014248	SCAF4	100	83.813	MGP_SPRETEiJ_G0021850	Scaf4	100	85.817	Mus_spretus
ENSECAG00000014248	SCAF4	100	95.317	ENSMPUG00000001078	SCAF4	100	95.317	Mustela_putorius_furo
ENSECAG00000014248	SCAF4	99	78.195	ENSMLUG00000011472	SCAF4	79	83.605	Myotis_lucifugus
ENSECAG00000014248	SCAF4	99	90.439	ENSNGAG00000005214	Scaf4	99	90.614	Nannospalax_galili
ENSECAG00000014248	SCAF4	100	94.071	ENSNLEG00000003569	SCAF4	100	93.723	Nomascus_leucogenys
ENSECAG00000014248	SCAF4	78	89.674	ENSOPRG00000007016	SCAF4	77	89.674	Ochotona_princeps
ENSECAG00000014248	SCAF4	100	89.460	ENSODEG00000002718	SCAF4	100	89.460	Octodon_degus
ENSECAG00000014248	SCAF4	71	59.845	ENSONIG00000004687	scaf4a	51	75.000	Oreochromis_niloticus
ENSECAG00000014248	SCAF4	100	88.571	ENSOCUG00000008336	SCAF4	100	88.745	Oryctolagus_cuniculus
ENSECAG00000014248	SCAF4	52	57.874	ENSORLG00000003420	scaf4b	66	59.072	Oryzias_latipes
ENSECAG00000014248	SCAF4	99	82.285	ENSOGAG00000014653	SCAF4	94	94.943	Otolemur_garnettii
ENSECAG00000014248	SCAF4	99	93.849	ENSOARG00000013894	SCAF4	99	93.455	Ovis_aries
ENSECAG00000014248	SCAF4	100	93.984	ENSPPAG00000028535	SCAF4	100	94.071	Pan_paniscus
ENSECAG00000014248	SCAF4	99	96.919	ENSPPRG00000000635	SCAF4	100	96.919	Panthera_pardus
ENSECAG00000014248	SCAF4	99	92.982	ENSPTIG00000021578	SCAF4	99	92.982	Panthera_tigris_altaica
ENSECAG00000014248	SCAF4	100	93.984	ENSPTRG00000013848	SCAF4	100	94.071	Pan_troglodytes
ENSECAG00000014248	SCAF4	100	93.247	ENSPANG00000017332	SCAF4	100	93.506	Papio_anubis
ENSECAG00000014248	SCAF4	64	63.408	ENSPKIG00000022408	scaf4a	90	66.018	Paramormyrops_kingsleyae
ENSECAG00000014248	SCAF4	99	77.309	ENSPSIG00000014242	SCAF4	57	84.317	Pelodiscus_sinensis
ENSECAG00000014248	SCAF4	61	87.626	ENSPCIG00000028183	SCAF4	91	82.509	Phascolarctos_cinereus
ENSECAG00000014248	SCAF4	100	93.815	ENSPPYG00000011355	SCAF4	100	94.077	Pongo_abelii
ENSECAG00000014248	SCAF4	100	83.522	ENSPCAG00000009998	SCAF4	68	82.614	Procavia_capensis
ENSECAG00000014248	SCAF4	100	93.565	ENSPCOG00000018710	SCAF4	100	93.565	Propithecus_coquereli
ENSECAG00000014248	SCAF4	100	95.968	ENSPVAG00000005220	SCAF4	100	96.056	Pteropus_vampyrus
ENSECAG00000014248	SCAF4	76	58.032	ENSPNAG00000016892	scaf4a	60	63.677	Pygocentrus_nattereri
ENSECAG00000014248	SCAF4	98	86.898	ENSRNOG00000002104	Scaf4	95	84.833	Rattus_norvegicus
ENSECAG00000014248	SCAF4	99	92.416	ENSRBIG00000040007	SCAF4	61	96.043	Rhinopithecus_bieti
ENSECAG00000014248	SCAF4	100	94.852	ENSRROG00000029488	SCAF4	100	94.498	Rhinopithecus_roxellana
ENSECAG00000014248	SCAF4	100	84.952	ENSSHAG00000001581	SCAF4	100	83.552	Sarcophilus_harrisii
ENSECAG00000014248	SCAF4	87	46.558	ENSSFOG00015006338	scaf4a	54	57.248	Scleropages_formosus
ENSECAG00000014248	SCAF4	66	60.000	ENSSMAG00000003738	scaf4b	54	72.152	Scophthalmus_maximus
ENSECAG00000014248	SCAF4	80	53.248	ENSSMAG00000017901	scaf4a	53	53.235	Scophthalmus_maximus
ENSECAG00000014248	SCAF4	57	62.007	ENSSDUG00000012380	scaf4b	54	70.886	Seriola_dumerili
ENSECAG00000014248	SCAF4	57	62.007	ENSSLDG00000023152	-	54	70.886	Seriola_lalandi_dorsalis
ENSECAG00000014248	SCAF4	100	90.278	ENSSARG00000009994	SCAF4	100	89.931	Sorex_araneus
ENSECAG00000014248	SCAF4	100	92.048	ENSSSCG00000021023	SCAF4	100	92.221	Sus_scrofa
ENSECAG00000014248	SCAF4	74	71.922	ENSTGUG00000013464	SCAF4	57	85.382	Taeniopygia_guttata
ENSECAG00000014248	SCAF4	50	59.489	ENSTRUG00000009536	-	65	58.065	Takifugu_rubripes
ENSECAG00000014248	SCAF4	99	96.117	ENSTTRG00000010963	SCAF4	100	96.117	Tursiops_truncatus
ENSECAG00000014248	SCAF4	100	95.180	ENSUAMG00000008860	SCAF4	100	95.180	Ursus_americanus
ENSECAG00000014248	SCAF4	99	94.410	ENSUMAG00000016962	SCAF4	100	94.410	Ursus_maritimus
ENSECAG00000014248	SCAF4	99	97.516	ENSVVUG00000002953	SCAF4	100	97.516	Vulpes_vulpes
ENSECAG00000014248	SCAF4	99	55.723	ENSXETG00000007351	scaf4	63	65.812	Xenopus_tropicalis