EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000014420 (Gene tree)
Gene ID: 100053009
Gene Symbol: TRNT1
Alias: -
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 18117 bases
Position: chr16:14210126-14228242
Accession: 24545
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000035633	PolyA_pol	PF01743.20	2.4e-33	1	1
ENSECAP00000012067	PolyA_pol	PF01743.20	2.5e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000015051	-	1332	-	ENSECAP00000012067	434 (aa)	XP_005600480	F7CNA6
ENSECAT00000035936	-	1269	-	ENSECAP00000035633	413 (aa)	-	-

Gene Model

Click here to download ENSECAG00000014420's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000014420's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000014420	TRNT1	100	94.700	ENSG00000072756	TRNT1	100	94.700	Homo_sapiens
ENSECAG00000014420	TRNT1	96	67.925	ENSAPOG00000013687	trnt1	99	67.925	Acanthochromis_polyacanthus
ENSECAG00000014420	TRNT1	100	93.119	ENSAMEG00000014520	TRNT1	100	93.119	Ailuropoda_melanoleuca
ENSECAG00000014420	TRNT1	98	69.176	ENSACIG00000021706	trnt1	99	69.176	Amphilophus_citrinellus
ENSECAG00000014420	TRNT1	98	68.941	ENSAOCG00000024612	trnt1	99	68.941	Amphiprion_ocellaris
ENSECAG00000014420	TRNT1	94	62.683	ENSAPEG00000022627	trnt1	95	62.683	Amphiprion_percula
ENSECAG00000014420	TRNT1	93	71.464	ENSATEG00000008928	trnt1	99	71.464	Anabas_testudineus
ENSECAG00000014420	TRNT1	89	77.519	ENSAPLG00000004258	TRNT1	96	77.519	Anas_platyrhynchos
ENSECAG00000014420	TRNT1	98	75.116	ENSACAG00000005657	TRNT1	98	75.116	Anolis_carolinensis
ENSECAG00000014420	TRNT1	100	94.240	ENSANAG00000024802	TRNT1	100	94.240	Aotus_nancymaae
ENSECAG00000014420	TRNT1	98	68.471	ENSACLG00000022227	trnt1	99	68.471	Astatotilapia_calliptera
ENSECAG00000014420	TRNT1	99	68.287	ENSAMXG00000003960	trnt1	99	68.129	Astyanax_mexicanus
ENSECAG00000014420	TRNT1	100	91.935	ENSBTAG00000019534	TRNT1	100	91.935	Bos_taurus
ENSECAG00000014420	TRNT1	94	43.943	WBGene00010089	hpo-31	94	43.943	Caenorhabditis_elegans
ENSECAG00000014420	TRNT1	100	94.240	ENSCJAG00000015466	TRNT1	100	94.240	Callithrix_jacchus
ENSECAG00000014420	TRNT1	100	93.088	ENSCAFG00000005985	TRNT1	99	93.088	Canis_familiaris
ENSECAG00000014420	TRNT1	100	93.088	ENSCAFG00020014746	TRNT1	99	93.088	Canis_lupus_dingo
ENSECAG00000014420	TRNT1	100	91.935	ENSCHIG00000007030	TRNT1	99	91.935	Capra_hircus
ENSECAG00000014420	TRNT1	100	93.779	ENSTSYG00000013390	TRNT1	100	93.779	Carlito_syrichta
ENSECAG00000014420	TRNT1	87	74.074	ENSCAPG00000006891	TRNT1	100	74.074	Cavia_aperea
ENSECAG00000014420	TRNT1	99	91.224	ENSCPOG00000007849	TRNT1	99	91.224	Cavia_porcellus
ENSECAG00000014420	TRNT1	95	91.346	ENSCCAG00000002919	TRNT1	100	93.516	Cebus_capucinus
ENSECAG00000014420	TRNT1	99	94.688	ENSCATG00000031985	TRNT1	99	94.688	Cercocebus_atys
ENSECAG00000014420	TRNT1	99	92.379	ENSCLAG00000005186	TRNT1	99	92.379	Chinchilla_lanigera
ENSECAG00000014420	TRNT1	100	95.161	ENSCSAG00000011052	TRNT1	100	95.161	Chlorocebus_sabaeus
ENSECAG00000014420	TRNT1	85	91.584	ENSCHOG00000005712	TRNT1	85	91.584	Choloepus_hoffmanni
ENSECAG00000014420	TRNT1	99	79.677	ENSCPBG00000017636	TRNT1	98	79.677	Chrysemys_picta_bellii
ENSECAG00000014420	TRNT1	93	43.796	ENSCING00000007069	-	99	43.796	Ciona_intestinalis
ENSECAG00000014420	TRNT1	97	44.811	ENSCSAVG00000007494	-	99	44.811	Ciona_savignyi
ENSECAG00000014420	TRNT1	100	94.700	ENSCANG00000039030	TRNT1	100	94.700	Colobus_angolensis_palliatus
ENSECAG00000014420	TRNT1	100	91.244	ENSCGRG00001009998	Trnt1	100	91.244	Cricetulus_griseus_chok1gshd
ENSECAG00000014420	TRNT1	100	91.244	ENSCGRG00000013410	Trnt1	100	91.244	Cricetulus_griseus_crigri
ENSECAG00000014420	TRNT1	94	69.212	ENSCSEG00000008157	trnt1	95	69.212	Cynoglossus_semilaevis
ENSECAG00000014420	TRNT1	94	70.443	ENSCVAG00000019770	trnt1	96	70.443	Cyprinodon_variegatus
ENSECAG00000014420	TRNT1	94	70.098	ENSDARG00000075297	trnt1	95	70.098	Danio_rerio
ENSECAG00000014420	TRNT1	100	91.705	ENSDNOG00000008837	TRNT1	100	91.705	Dasypus_novemcinctus
ENSECAG00000014420	TRNT1	100	90.553	ENSDORG00000014035	Trnt1	100	90.553	Dipodomys_ordii
ENSECAG00000014420	TRNT1	92	49.505	FBgn0037369	CG2100	83	49.505	Drosophila_melanogaster
ENSECAG00000014420	TRNT1	60	91.165	ENSETEG00000018177	TRNT1	100	91.165	Echinops_telfairi
ENSECAG00000014420	TRNT1	93	63.275	ENSEBUG00000012779	-	95	63.275	Eptatretus_burgeri
ENSECAG00000014420	TRNT1	100	99.770	ENSEASG00005003577	TRNT1	100	99.770	Equus_asinus_asinus
ENSECAG00000014420	TRNT1	100	89.631	ENSEEUG00000009567	TRNT1	100	89.631	Erinaceus_europaeus
ENSECAG00000014420	TRNT1	99	68.519	ENSELUG00000003802	trnt1	99	68.519	Esox_lucius
ENSECAG00000014420	TRNT1	100	93.318	ENSFCAG00000026805	TRNT1	99	93.318	Felis_catus
ENSECAG00000014420	TRNT1	89	75.325	ENSFALG00000013539	TRNT1	100	75.325	Ficedula_albicollis
ENSECAG00000014420	TRNT1	99	91.686	ENSFDAG00000018412	TRNT1	99	91.686	Fukomys_damarensis
ENSECAG00000014420	TRNT1	94	70.443	ENSFHEG00000019294	trnt1	96	70.443	Fundulus_heteroclitus
ENSECAG00000014420	TRNT1	99	65.893	ENSGMOG00000007460	trnt1	99	65.893	Gadus_morhua
ENSECAG00000014420	TRNT1	94	75.616	ENSGALG00000017368	TRNT1	94	75.616	Gallus_gallus
ENSECAG00000014420	TRNT1	94	70.443	ENSGAFG00000008647	trnt1	96	70.443	Gambusia_affinis
ENSECAG00000014420	TRNT1	98	66.588	ENSGACG00000011903	trnt1	99	66.588	Gasterosteus_aculeatus
ENSECAG00000014420	TRNT1	98	81.132	ENSGAGG00000020942	TRNT1	96	81.132	Gopherus_agassizii
ENSECAG00000014420	TRNT1	100	94.931	ENSGGOG00000015286	TRNT1	100	94.931	Gorilla_gorilla
ENSECAG00000014420	TRNT1	98	68.471	ENSHBUG00000002797	trnt1	99	68.471	Haplochromis_burtoni
ENSECAG00000014420	TRNT1	99	90.993	ENSHGLG00000003649	TRNT1	99	90.993	Heterocephalus_glaber_female
ENSECAG00000014420	TRNT1	99	85.714	ENSHGLG00000000221	-	99	85.714	Heterocephalus_glaber_female
ENSECAG00000014420	TRNT1	99	89.838	ENSHGLG00100016421	TRNT1	99	89.838	Heterocephalus_glaber_male
ENSECAG00000014420	TRNT1	94	67.980	ENSHCOG00000010618	trnt1	95	67.980	Hippocampus_comes
ENSECAG00000014420	TRNT1	96	68.029	ENSIPUG00000000971	trnt1	97	68.029	Ictalurus_punctatus
ENSECAG00000014420	TRNT1	100	87.788	ENSSTOG00000000150	TRNT1	98	91.584	Ictidomys_tridecemlineatus
ENSECAG00000014420	TRNT1	100	91.475	ENSJJAG00000018561	Trnt1	99	91.475	Jaculus_jaculus
ENSECAG00000014420	TRNT1	98	68.706	ENSKMAG00000011307	trnt1	99	68.706	Kryptolebias_marmoratus
ENSECAG00000014420	TRNT1	94	64.146	ENSLBEG00000019457	trnt1	97	64.146	Labrus_bergylta
ENSECAG00000014420	TRNT1	95	74.939	ENSLACG00000013227	TRNT1	95	74.939	Latimeria_chalumnae
ENSECAG00000014420	TRNT1	98	70.629	ENSLOCG00000011105	trnt1	98	70.629	Lepisosteus_oculatus
ENSECAG00000014420	TRNT1	100	93.779	ENSLAFG00000023191	TRNT1	100	93.779	Loxodonta_africana
ENSECAG00000014420	TRNT1	99	94.919	ENSMFAG00000045113	TRNT1	99	94.919	Macaca_fascicularis
ENSECAG00000014420	TRNT1	99	94.919	ENSMMUG00000017983	TRNT1	99	94.919	Macaca_mulatta
ENSECAG00000014420	TRNT1	99	94.919	ENSMNEG00000037805	TRNT1	99	94.919	Macaca_nemestrina
ENSECAG00000014420	TRNT1	88	96.597	ENSMLEG00000033671	TRNT1	99	96.597	Mandrillus_leucophaeus
ENSECAG00000014420	TRNT1	98	69.176	ENSMAMG00000023401	trnt1	99	69.176	Mastacembelus_armatus
ENSECAG00000014420	TRNT1	98	68.471	ENSMZEG00005009141	trnt1	99	68.471	Maylandia_zebra
ENSECAG00000014420	TRNT1	74	75.701	ENSMGAG00000009971	TRNT1	100	75.701	Meleagris_gallopavo
ENSECAG00000014420	TRNT1	100	91.475	ENSMAUG00000020707	Trnt1	100	91.475	Mesocricetus_auratus
ENSECAG00000014420	TRNT1	100	92.627	ENSMICG00000016615	TRNT1	100	92.627	Microcebus_murinus
ENSECAG00000014420	TRNT1	100	91.244	ENSMOCG00000004539	Trnt1	100	91.244	Microtus_ochrogaster
ENSECAG00000014420	TRNT1	98	67.765	ENSMMOG00000010742	trnt1	99	67.765	Mola_mola
ENSECAG00000014420	TRNT1	100	84.332	ENSMODG00000004368	TRNT1	100	84.332	Monodelphis_domestica
ENSECAG00000014420	TRNT1	98	68.000	ENSMALG00000008376	trnt1	99	68.000	Monopterus_albus
ENSECAG00000014420	TRNT1	100	91.475	MGP_CAROLIEiJ_G0028698	Trnt1	100	91.475	Mus_caroli
ENSECAG00000014420	TRNT1	100	91.475	ENSMUSG00000013736	Trnt1	100	91.475	Mus_musculus
ENSECAG00000014420	TRNT1	100	90.783	MGP_PahariEiJ_G0022449	Trnt1	100	90.783	Mus_pahari
ENSECAG00000014420	TRNT1	100	91.475	MGP_SPRETEiJ_G0029726	Trnt1	100	91.475	Mus_spretus
ENSECAG00000014420	TRNT1	100	93.779	ENSMPUG00000017017	TRNT1	99	93.779	Mustela_putorius_furo
ENSECAG00000014420	TRNT1	89	88.342	ENSMLUG00000011864	TRNT1	100	88.342	Myotis_lucifugus
ENSECAG00000014420	TRNT1	100	90.323	ENSNGAG00000000537	Trnt1	100	90.323	Nannospalax_galili
ENSECAG00000014420	TRNT1	84	68.406	ENSNBRG00000023606	trnt1	99	68.406	Neolamprologus_brichardi
ENSECAG00000014420	TRNT1	100	95.392	ENSNLEG00000003226	TRNT1	100	95.392	Nomascus_leucogenys
ENSECAG00000014420	TRNT1	100	84.793	ENSMEUG00000004684	TRNT1	100	84.793	Notamacropus_eugenii
ENSECAG00000014420	TRNT1	88	79.896	ENSOPRG00000015067	TRNT1	99	79.896	Ochotona_princeps
ENSECAG00000014420	TRNT1	99	91.686	ENSODEG00000007597	TRNT1	99	91.686	Octodon_degus
ENSECAG00000014420	TRNT1	98	68.941	ENSONIG00000020273	trnt1	98	68.941	Oreochromis_niloticus
ENSECAG00000014420	TRNT1	99	75.231	ENSOANG00000007514	TRNT1	99	75.231	Ornithorhynchus_anatinus
ENSECAG00000014420	TRNT1	100	84.793	ENSOCUG00000008580	TRNT1	99	84.793	Oryctolagus_cuniculus
ENSECAG00000014420	TRNT1	94	68.473	ENSORLG00000003165	trnt1	96	68.473	Oryzias_latipes
ENSECAG00000014420	TRNT1	94	68.719	ENSORLG00020022060	trnt1	96	68.719	Oryzias_latipes_hni
ENSECAG00000014420	TRNT1	96	65.721	ENSORLG00015018915	trnt1	99	65.721	Oryzias_latipes_hsok
ENSECAG00000014420	TRNT1	95	66.262	ENSOMEG00000003331	trnt1	97	66.262	Oryzias_melastigma
ENSECAG00000014420	TRNT1	100	91.705	ENSOARG00000008631	TRNT1	99	91.705	Ovis_aries
ENSECAG00000014420	TRNT1	100	94.931	ENSPPAG00000043566	TRNT1	100	94.931	Pan_paniscus
ENSECAG00000014420	TRNT1	99	93.072	ENSPPRG00000001327	TRNT1	99	93.072	Panthera_pardus
ENSECAG00000014420	TRNT1	100	93.318	ENSPTIG00000011448	TRNT1	99	93.318	Panthera_tigris_altaica
ENSECAG00000014420	TRNT1	100	94.931	ENSPTRG00000014564	TRNT1	100	94.931	Pan_troglodytes
ENSECAG00000014420	TRNT1	99	94.688	ENSPANG00000025944	TRNT1	99	94.688	Papio_anubis
ENSECAG00000014420	TRNT1	98	69.070	ENSPKIG00000020015	trnt1	99	69.070	Paramormyrops_kingsleyae
ENSECAG00000014420	TRNT1	91	81.108	ENSPSIG00000017356	TRNT1	99	82.778	Pelodiscus_sinensis
ENSECAG00000014420	TRNT1	97	67.290	ENSPMGG00000008888	trnt1	99	67.290	Periophthalmus_magnuspinnatus
ENSECAG00000014420	TRNT1	100	91.935	ENSPEMG00000019845	Trnt1	100	91.935	Peromyscus_maniculatus_bairdii
ENSECAG00000014420	TRNT1	100	84.793	ENSPCIG00000030436	TRNT1	100	84.793	Phascolarctos_cinereus
ENSECAG00000014420	TRNT1	94	70.197	ENSPFOG00000006194	trnt1	95	70.197	Poecilia_formosa
ENSECAG00000014420	TRNT1	94	70.197	ENSPLAG00000015623	trnt1	99	69.975	Poecilia_latipinna
ENSECAG00000014420	TRNT1	94	70.197	ENSPMEG00000012216	trnt1	99	69.975	Poecilia_mexicana
ENSECAG00000014420	TRNT1	94	69.512	ENSPREG00000021470	trnt1	96	69.512	Poecilia_reticulata
ENSECAG00000014420	TRNT1	100	94.700	ENSPPYG00000013702	TRNT1	100	94.700	Pongo_abelii
ENSECAG00000014420	TRNT1	88	92.950	ENSPCAG00000001951	TRNT1	100	92.950	Procavia_capensis
ENSECAG00000014420	TRNT1	100	94.931	ENSPCOG00000022228	TRNT1	100	94.931	Propithecus_coquereli
ENSECAG00000014420	TRNT1	88	92.708	ENSPVAG00000008784	TRNT1	100	92.708	Pteropus_vampyrus
ENSECAG00000014420	TRNT1	98	68.235	ENSPNYG00000003120	trnt1	99	68.235	Pundamilia_nyererei
ENSECAG00000014420	TRNT1	98	68.372	ENSPNAG00000000565	trnt1	99	68.372	Pygocentrus_nattereri
ENSECAG00000014420	TRNT1	100	91.475	ENSRNOG00000006432	Trnt1	100	91.475	Rattus_norvegicus
ENSECAG00000014420	TRNT1	100	92.396	ENSRBIG00000042632	TRNT1	100	92.396	Rhinopithecus_bieti
ENSECAG00000014420	TRNT1	100	94.470	ENSRROG00000036866	TRNT1	100	94.470	Rhinopithecus_roxellana
ENSECAG00000014420	TRNT1	100	94.240	ENSSBOG00000021208	TRNT1	100	94.240	Saimiri_boliviensis_boliviensis
ENSECAG00000014420	TRNT1	100	84.793	ENSSHAG00000018861	TRNT1	100	84.793	Sarcophilus_harrisii
ENSECAG00000014420	TRNT1	99	68.894	ENSSFOG00015020844	trnt1	99	69.393	Scleropages_formosus
ENSECAG00000014420	TRNT1	98	68.235	ENSSMAG00000015432	trnt1	97	68.235	Scophthalmus_maximus
ENSECAG00000014420	TRNT1	98	68.000	ENSSDUG00000012320	trnt1	99	68.000	Seriola_dumerili
ENSECAG00000014420	TRNT1	98	68.000	ENSSLDG00000009325	trnt1	99	68.000	Seriola_lalandi_dorsalis
ENSECAG00000014420	TRNT1	58	65.690	ENSSLDG00000016463	-	91	65.690	Seriola_lalandi_dorsalis
ENSECAG00000014420	TRNT1	88	83.594	ENSSPUG00000014153	TRNT1	100	83.594	Sphenodon_punctatus
ENSECAG00000014420	TRNT1	98	67.529	ENSSPAG00000021005	trnt1	99	67.529	Stegastes_partitus
ENSECAG00000014420	TRNT1	100	93.548	ENSSSCG00000011529	TRNT1	100	93.548	Sus_scrofa
ENSECAG00000014420	TRNT1	93	75.802	ENSTGUG00000010192	TRNT1	99	75.802	Taeniopygia_guttata
ENSECAG00000014420	TRNT1	98	68.706	ENSTRUG00000001088	trnt1	99	68.706	Takifugu_rubripes
ENSECAG00000014420	TRNT1	99	68.224	ENSTNIG00000007363	trnt1	99	68.224	Tetraodon_nigroviridis
ENSECAG00000014420	TRNT1	79	75.676	ENSTBEG00000006367	TRNT1	100	75.676	Tupaia_belangeri
ENSECAG00000014420	TRNT1	100	92.627	ENSTTRG00000007803	TRNT1	100	92.627	Tursiops_truncatus
ENSECAG00000014420	TRNT1	100	92.627	ENSUAMG00000022574	TRNT1	99	92.627	Ursus_americanus
ENSECAG00000014420	TRNT1	100	93.088	ENSUMAG00000024092	TRNT1	99	93.088	Ursus_maritimus
ENSECAG00000014420	TRNT1	100	93.318	ENSVVUG00000012810	TRNT1	99	93.318	Vulpes_vulpes
ENSECAG00000014420	TRNT1	98	63.869	ENSXETG00000025091	trnt1	99	65.672	Xenopus_tropicalis
ENSECAG00000014420	TRNT1	94	70.443	ENSXCOG00000010150	trnt1	96	70.443	Xiphophorus_couchianus
ENSECAG00000014420	TRNT1	94	69.951	ENSXMAG00000002227	trnt1	96	69.951	Xiphophorus_maculatus