EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000014620 (Gene tree)
Gene ID: 100058924
Gene Symbol: VARS
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 13101 bases
Position: chr20:32394269-32407369
Accession: 24882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000013051	tRNA-synt_1g	PF09334.11	9.6e-11	1	1
ENSECAP00000013051	Anticodon_1	PF08264.13	1.5e-32	1	1
ENSECAP00000013051	tRNA-synt_1	PF00133.22	2.9e-202	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000016174	-	3833	XM_023624630	ENSECAP00000013051	1265 (aa)	XP_023480398	F6UXK2

Gene Model

Click here to download ENSECAG00000014620's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000014620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000014620	VARS	82	50.772	ENSECAG00000018202	VARS2	92	52.266

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000014620	VARS	100	95.257	ENSG00000204394	VARS	100	98.276	Homo_sapiens
ENSECAG00000014620	VARS	98	65.144	ENSAPOG00000020921	vars	99	64.824	Acanthochromis_polyacanthus
ENSECAG00000014620	VARS	98	65.144	ENSAPOG00000020691	vars	99	64.824	Acanthochromis_polyacanthus
ENSECAG00000014620	VARS	100	95.577	ENSAMEG00000006417	VARS	100	95.182	Ailuropoda_melanoleuca
ENSECAG00000014620	VARS	100	65.517	ENSACIG00000013752	vars	100	65.357	Amphilophus_citrinellus
ENSECAG00000014620	VARS	100	65.039	ENSAOCG00000002447	vars	100	64.623	Amphiprion_ocellaris
ENSECAG00000014620	VARS	100	64.884	ENSAPEG00000010638	vars	99	64.747	Amphiprion_percula
ENSECAG00000014620	VARS	100	65.354	ENSATEG00000020219	vars	100	65.091	Anabas_testudineus
ENSECAG00000014620	VARS	90	71.144	ENSACAG00000029133	-	99	70.537	Anolis_carolinensis
ENSECAG00000014620	VARS	100	95.494	ENSANAG00000015453	VARS	100	95.020	Aotus_nancymaae
ENSECAG00000014620	VARS	100	65.143	ENSACLG00000025699	vars	97	64.984	Astatotilapia_calliptera
ENSECAG00000014620	VARS	94	66.583	ENSAMXG00000017716	vars	95	66.583	Astyanax_mexicanus
ENSECAG00000014620	VARS	100	96.364	ENSBTAG00000005631	VARS	100	96.364	Bos_taurus
ENSECAG00000014620	VARS	100	95.494	ENSCJAG00000002604	VARS	100	95.020	Callithrix_jacchus
ENSECAG00000014620	VARS	100	94.941	ENSCAFG00000000636	VARS	100	94.545	Canis_familiaris
ENSECAG00000014620	VARS	94	95.105	ENSCAFG00020020790	VARS	98	93.081	Canis_lupus_dingo
ENSECAG00000014620	VARS	100	96.522	ENSCHIG00000011008	VARS	100	96.522	Capra_hircus
ENSECAG00000014620	VARS	100	95.336	ENSTSYG00000001567	VARS	100	94.862	Carlito_syrichta
ENSECAG00000014620	VARS	91	91.098	ENSCAPG00000013736	VARS	99	90.493	Cavia_aperea
ENSECAG00000014620	VARS	100	92.095	ENSCPOG00000000870	VARS	100	91.542	Cavia_porcellus
ENSECAG00000014620	VARS	100	95.415	ENSCCAG00000035656	VARS	100	95.522	Cebus_capucinus
ENSECAG00000014620	VARS	100	94.941	ENSCATG00000022394	VARS	100	94.466	Cercocebus_atys
ENSECAG00000014620	VARS	88	89.773	ENSCLAG00000009470	VARS	92	89.248	Chinchilla_lanigera
ENSECAG00000014620	VARS	100	95.178	ENSCSAG00000008784	VARS	100	94.704	Chlorocebus_sabaeus
ENSECAG00000014620	VARS	77	74.974	ENSCPBG00000007943	VARS	96	74.974	Chrysemys_picta_bellii
ENSECAG00000014620	VARS	100	95.099	ENSCANG00000033570	VARS	100	94.625	Colobus_angolensis_palliatus
ENSECAG00000014620	VARS	100	93.123	ENSCGRG00001005686	Vars	100	92.806	Cricetulus_griseus_chok1gshd
ENSECAG00000014620	VARS	92	88.033	ENSCGRG00000013352	Vars	78	87.699	Cricetulus_griseus_crigri
ENSECAG00000014620	VARS	100	64.692	ENSCSEG00000019652	vars	100	64.534	Cynoglossus_semilaevis
ENSECAG00000014620	VARS	100	65.839	ENSCVAG00000022398	vars	100	65.606	Cyprinodon_variegatus
ENSECAG00000014620	VARS	100	64.829	ENSDARG00000044575	vars	100	64.752	Danio_rerio
ENSECAG00000014620	VARS	83	94.264	ENSDORG00000016433	Vars	94	93.881	Dipodomys_ordii
ENSECAG00000014620	VARS	69	87.703	ENSETEG00000003824	VARS	77	87.703	Echinops_telfairi
ENSECAG00000014620	VARS	51	70.833	ENSEBUG00000007086	vars	84	69.808	Eptatretus_burgeri
ENSECAG00000014620	VARS	57	61.951	ENSEBUG00000004637	vars	100	62.225	Eptatretus_burgeri
ENSECAG00000014620	VARS	100	99.763	ENSEASG00005015673	VARS	100	99.763	Equus_asinus_asinus
ENSECAG00000014620	VARS	83	91.349	ENSEEUG00000004116	VARS	83	91.349	Erinaceus_europaeus
ENSECAG00000014620	VARS	100	64.456	ENSELUG00000006550	vars	97	64.688	Esox_lucius
ENSECAG00000014620	VARS	100	96.443	ENSFCAG00000004510	VARS	100	96.443	Felis_catus
ENSECAG00000014620	VARS	82	92.585	ENSFDAG00000011401	VARS	100	91.967	Fukomys_damarensis
ENSECAG00000014620	VARS	100	65.916	ENSFHEG00000010672	vars	100	65.761	Fundulus_heteroclitus
ENSECAG00000014620	VARS	92	66.251	ENSGMOG00000014908	vars	97	66.251	Gadus_morhua
ENSECAG00000014620	VARS	100	66.174	ENSGAFG00000021630	vars	100	65.941	Gambusia_affinis
ENSECAG00000014620	VARS	92	66.611	ENSGACG00000009601	vars	98	66.195	Gasterosteus_aculeatus
ENSECAG00000014620	VARS	50	65.142	ENSGAGG00000006508	-	91	64.826	Gopherus_agassizii
ENSECAG00000014620	VARS	100	95.415	ENSGGOG00000011364	VARS	100	94.941	Gorilla_gorilla
ENSECAG00000014620	VARS	100	65.143	ENSHBUG00000017151	vars	97	64.984	Haplochromis_burtoni
ENSECAG00000014620	VARS	100	90.909	ENSHGLG00000011646	VARS	100	90.593	Heterocephalus_glaber_female
ENSECAG00000014620	VARS	93	83.320	ENSHGLG00100018062	VARS	100	83.237	Heterocephalus_glaber_male
ENSECAG00000014620	VARS	99	64.911	ENSHCOG00000012198	vars	99	64.774	Hippocampus_comes
ENSECAG00000014620	VARS	100	65.708	ENSIPUG00000005218	vars	100	65.708	Ictalurus_punctatus
ENSECAG00000014620	VARS	100	94.708	ENSSTOG00000013112	VARS	100	94.392	Ictidomys_tridecemlineatus
ENSECAG00000014620	VARS	100	91.779	ENSJJAG00000019749	-	100	91.304	Jaculus_jaculus
ENSECAG00000014620	VARS	100	72.490	ENSJJAG00000015343	-	99	73.676	Jaculus_jaculus
ENSECAG00000014620	VARS	100	65.430	ENSKMAG00000009455	vars	100	65.193	Kryptolebias_marmoratus
ENSECAG00000014620	VARS	100	64.850	ENSLBEG00000010341	vars	100	64.613	Labrus_bergylta
ENSECAG00000014620	VARS	94	62.613	ENSLACG00000015232	VARS	99	62.541	Latimeria_chalumnae
ENSECAG00000014620	VARS	100	66.979	ENSLOCG00000004240	vars	100	66.979	Lepisosteus_oculatus
ENSECAG00000014620	VARS	100	95.099	ENSLAFG00000023090	VARS	100	94.387	Loxodonta_africana
ENSECAG00000014620	VARS	100	95.178	ENSMFAG00000001032	VARS	100	94.704	Macaca_fascicularis
ENSECAG00000014620	VARS	100	95.178	ENSMMUG00000006828	VARS	100	94.704	Macaca_mulatta
ENSECAG00000014620	VARS	100	95.178	ENSMNEG00000042072	VARS	100	94.704	Macaca_nemestrina
ENSECAG00000014620	VARS	100	95.099	ENSMLEG00000039307	VARS	100	94.625	Mandrillus_leucophaeus
ENSECAG00000014620	VARS	100	64.984	ENSMAMG00000003949	vars	100	65.160	Mastacembelus_armatus
ENSECAG00000014620	VARS	100	65.143	ENSMZEG00005018327	vars	100	64.905	Maylandia_zebra
ENSECAG00000014620	VARS	100	92.964	ENSMAUG00000006715	Vars	100	92.648	Mesocricetus_auratus
ENSECAG00000014620	VARS	100	94.625	ENSMICG00000003548	VARS	100	94.279	Microcebus_murinus
ENSECAG00000014620	VARS	100	90.672	ENSMOCG00000015404	Vars	100	90.198	Microtus_ochrogaster
ENSECAG00000014620	VARS	100	64.729	ENSMMOG00000015801	vars	100	64.650	Mola_mola
ENSECAG00000014620	VARS	100	86.957	ENSMODG00000015204	-	100	86.640	Monodelphis_domestica
ENSECAG00000014620	VARS	99	65.016	ENSMALG00000022532	vars	99	64.882	Monopterus_albus
ENSECAG00000014620	VARS	100	93.992	MGP_CAROLIEiJ_G0021491	Vars	100	93.281	Mus_caroli
ENSECAG00000014620	VARS	100	93.834	ENSMUSG00000007029	Vars	100	93.123	Mus_musculus
ENSECAG00000014620	VARS	100	93.518	MGP_PahariEiJ_G0020486	Vars	100	92.885	Mus_pahari
ENSECAG00000014620	VARS	100	93.913	MGP_SPRETEiJ_G0022396	Vars	100	93.202	Mus_spretus
ENSECAG00000014620	VARS	100	95.652	ENSMPUG00000010821	VARS	100	95.257	Mustela_putorius_furo
ENSECAG00000014620	VARS	78	95.547	ENSMLUG00000013126	VARS	100	95.547	Myotis_lucifugus
ENSECAG00000014620	VARS	100	92.885	ENSNGAG00000012151	Vars	100	92.727	Nannospalax_galili
ENSECAG00000014620	VARS	100	65.066	ENSNBRG00000020520	vars	100	64.907	Neolamprologus_brichardi
ENSECAG00000014620	VARS	100	94.625	ENSNLEG00000006351	VARS	100	94.150	Nomascus_leucogenys
ENSECAG00000014620	VARS	100	83.241	ENSMEUG00000011378	VARS	100	83.241	Notamacropus_eugenii
ENSECAG00000014620	VARS	100	93.755	ENSOPRG00000003607	VARS	100	93.439	Ochotona_princeps
ENSECAG00000014620	VARS	100	90.909	ENSODEG00000017681	VARS	100	90.435	Octodon_degus
ENSECAG00000014620	VARS	100	65.547	ENSONIG00000013064	vars	99	68.288	Oreochromis_niloticus
ENSECAG00000014620	VARS	77	78.860	ENSOANG00000005400	VARS	98	78.716	Ornithorhynchus_anatinus
ENSECAG00000014620	VARS	100	92.344	ENSOCUG00000022463	VARS	100	92.581	Oryctolagus_cuniculus
ENSECAG00000014620	VARS	100	64.981	ENSORLG00000013063	vars	100	64.923	Oryzias_latipes
ENSECAG00000014620	VARS	100	65.408	ENSORLG00020003504	vars	100	65.254	Oryzias_latipes_hni
ENSECAG00000014620	VARS	100	65.584	ENSORLG00015009001	vars	100	65.352	Oryzias_latipes_hsok
ENSECAG00000014620	VARS	100	65.382	ENSOMEG00000015016	vars	100	65.150	Oryzias_melastigma
ENSECAG00000014620	VARS	100	94.308	ENSOGAG00000007515	VARS	100	93.834	Otolemur_garnettii
ENSECAG00000014620	VARS	100	95.494	ENSPPAG00000034012	VARS	100	95.020	Pan_paniscus
ENSECAG00000014620	VARS	100	96.601	ENSPPRG00000014855	VARS	100	96.601	Panthera_pardus
ENSECAG00000014620	VARS	86	96.798	ENSPTIG00000010462	VARS	95	96.798	Panthera_tigris_altaica
ENSECAG00000014620	VARS	100	95.415	ENSPTRG00000017985	VARS	100	94.941	Pan_troglodytes
ENSECAG00000014620	VARS	100	93.538	ENSPANG00000014565	VARS	100	93.065	Papio_anubis
ENSECAG00000014620	VARS	100	63.966	ENSPKIG00000016304	vars	100	63.966	Paramormyrops_kingsleyae
ENSECAG00000014620	VARS	100	65.879	ENSPMGG00000023909	vars	100	65.721	Periophthalmus_magnuspinnatus
ENSECAG00000014620	VARS	100	94.071	ENSPEMG00000006639	Vars	100	93.755	Peromyscus_maniculatus_bairdii
ENSECAG00000014620	VARS	100	86.245	ENSPCIG00000018553	VARS	100	85.929	Phascolarctos_cinereus
ENSECAG00000014620	VARS	100	66.330	ENSPFOG00000015690	vars	100	66.096	Poecilia_formosa
ENSECAG00000014620	VARS	100	66.824	ENSPLAG00000009590	vars	100	66.431	Poecilia_latipinna
ENSECAG00000014620	VARS	100	66.330	ENSPMEG00000004708	vars	100	66.096	Poecilia_mexicana
ENSECAG00000014620	VARS	100	64.516	ENSPREG00000013264	vars	100	64.319	Poecilia_reticulata
ENSECAG00000014620	VARS	100	93.676	ENSPPYG00000016460	VARS	100	93.202	Pongo_abelii
ENSECAG00000014620	VARS	86	92.639	ENSPCAG00000013565	VARS	86	92.639	Procavia_capensis
ENSECAG00000014620	VARS	100	95.889	ENSPCOG00000010942	VARS	100	95.889	Propithecus_coquereli
ENSECAG00000014620	VARS	100	92.648	ENSPVAG00000012403	VARS	100	91.937	Pteropus_vampyrus
ENSECAG00000014620	VARS	100	65.143	ENSPNYG00000022511	vars	100	64.984	Pundamilia_nyererei
ENSECAG00000014620	VARS	100	65.015	ENSPNAG00000020962	vars	100	65.170	Pygocentrus_nattereri
ENSECAG00000014620	VARS	100	93.834	ENSRNOG00000000867	Vars	100	93.518	Rattus_norvegicus
ENSECAG00000014620	VARS	100	95.257	ENSRBIG00000041669	VARS	100	94.783	Rhinopithecus_bieti
ENSECAG00000014620	VARS	100	95.257	ENSRROG00000045490	VARS	100	94.783	Rhinopithecus_roxellana
ENSECAG00000014620	VARS	100	95.336	ENSSBOG00000035402	VARS	100	94.862	Saimiri_boliviensis_boliviensis
ENSECAG00000014620	VARS	100	81.633	ENSSHAG00000006937	VARS	100	81.554	Sarcophilus_harrisii
ENSECAG00000014620	VARS	100	65.046	ENSSFOG00015014272	vars	100	64.660	Scleropages_formosus
ENSECAG00000014620	VARS	100	63.882	ENSSMAG00000009596	vars	99	63.721	Scophthalmus_maximus
ENSECAG00000014620	VARS	100	64.965	ENSSDUG00000014177	vars	100	64.806	Seriola_dumerili
ENSECAG00000014620	VARS	100	64.811	ENSSLDG00000025316	vars	100	64.651	Seriola_lalandi_dorsalis
ENSECAG00000014620	VARS	100	65.300	ENSSPAG00000017068	vars	100	64.981	Stegastes_partitus
ENSECAG00000014620	VARS	100	95.257	ENSSSCG00000038950	VARS	100	95.257	Sus_scrofa
ENSECAG00000014620	VARS	82	64.368	ENSTRUG00000012307	vars	98	64.313	Takifugu_rubripes
ENSECAG00000014620	VARS	100	65.234	ENSTNIG00000008011	vars	100	65.153	Tetraodon_nigroviridis
ENSECAG00000014620	VARS	54	98.127	ENSTBEG00000004728	-	60	98.127	Tupaia_belangeri
ENSECAG00000014620	VARS	100	87.510	ENSTTRG00000014128	VARS	100	87.431	Tursiops_truncatus
ENSECAG00000014620	VARS	100	91.987	ENSUAMG00000010424	VARS	100	91.595	Ursus_americanus
ENSECAG00000014620	VARS	93	96.825	ENSUMAG00000013486	VARS	98	96.825	Ursus_maritimus
ENSECAG00000014620	VARS	100	95.178	ENSVVUG00000021323	VARS	100	95.178	Vulpes_vulpes
ENSECAG00000014620	VARS	96	63.005	ENSXETG00000024076	vars	98	62.409	Xenopus_tropicalis
ENSECAG00000014620	VARS	100	66.090	ENSXCOG00000019172	vars	100	65.854	Xiphophorus_couchianus
ENSECAG00000014620	VARS	100	66.252	ENSXMAG00000010927	vars	100	66.019	Xiphophorus_maculatus