EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000014803 (Gene tree)
Gene ID: 100060960
Gene Symbol: GTF3A
Alias: -
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 12427 bases
Position: chr17:7244499-7256925
Accession: 18643
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000039400	zf-C2H2	PF00096.26	4.2e-32	1	6
ENSECAP00000039400	zf-C2H2	PF00096.26	4.2e-32	2	6
ENSECAP00000039400	zf-C2H2	PF00096.26	4.2e-32	3	6
ENSECAP00000039400	zf-C2H2	PF00096.26	4.2e-32	4	6
ENSECAP00000039400	zf-C2H2	PF00096.26	4.2e-32	5	6
ENSECAP00000039400	zf-C2H2	PF00096.26	4.2e-32	6	6
ENSECAP00000012543	zf-C2H2	PF00096.26	7.2e-32	1	6
ENSECAP00000012543	zf-C2H2	PF00096.26	7.2e-32	2	6
ENSECAP00000012543	zf-C2H2	PF00096.26	7.2e-32	3	6
ENSECAP00000012543	zf-C2H2	PF00096.26	7.2e-32	4	6
ENSECAP00000012543	zf-C2H2	PF00096.26	7.2e-32	5	6
ENSECAP00000012543	zf-C2H2	PF00096.26	7.2e-32	6	6
ENSECAP00000040521	zf-C2H2	PF00096.26	4.6e-29	1	5
ENSECAP00000040521	zf-C2H2	PF00096.26	4.6e-29	2	5
ENSECAP00000040521	zf-C2H2	PF00096.26	4.6e-29	3	5
ENSECAP00000040521	zf-C2H2	PF00096.26	4.6e-29	4	5
ENSECAP00000040521	zf-C2H2	PF00096.26	4.6e-29	5	5
ENSECAP00000040521	zf-met	PF12874.7	5.9e-07	1	1
ENSECAP00000039400	zf-met	PF12874.7	6.8e-07	1	1
ENSECAP00000012543	zf-met	PF12874.7	5.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000033508	-	1875	-	ENSECAP00000039400	345 (aa)	-	-
ENSECAT00000015592	-	1344	XM_023621335	ENSECAP00000012543	447 (aa)	XP_023477103	F7DS81
ENSECAT00000043667	-	1284	-	ENSECAP00000040521	427 (aa)	-	-

Gene Model

Click here to download ENSECAG00000014803's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000014803's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000014803	GTF3A	88	92.131	ENSECAG00000024825	-	89	80.344

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000014803	GTF3A	86	87.248	ENSAMEG00000015824	GTF3A	100	86.777	Ailuropoda_melanoleuca
ENSECAG00000014803	GTF3A	85	82.877	ENSBTAG00000012600	GTF3A	99	82.073	Bos_taurus
ENSECAG00000014803	GTF3A	83	87.197	ENSCAFG00000006794	GTF3A	98	86.592	Canis_familiaris
ENSECAG00000014803	GTF3A	94	75.000	ENSCHIG00000021040	-	87	80.541	Capra_hircus
ENSECAG00000014803	GTF3A	82	83.039	ENSCHIG00000010341	-	97	82.759	Capra_hircus
ENSECAG00000014803	GTF3A	86	81.271	ENSTSYG00000004206	GTF3A	98	82.067	Carlito_syrichta
ENSECAG00000014803	GTF3A	80	84.307	ENSCAPG00000015862	GTF3A	98	87.069	Cavia_aperea
ENSECAG00000014803	GTF3A	77	82.576	ENSCPOG00000010143	GTF3A	98	85.526	Cavia_porcellus
ENSECAG00000014803	GTF3A	71	86.885	ENSCLAG00000003912	GTF3A	93	85.197	Chinchilla_lanigera
ENSECAG00000014803	GTF3A	86	81.271	ENSDNOG00000037405	-	87	82.065	Dasypus_novemcinctus
ENSECAG00000014803	GTF3A	75	85.149	ENSETEG00000003225	GTF3A	78	79.828	Echinops_telfairi
ENSECAG00000014803	GTF3A	100	98.658	ENSEASG00005022495	-	100	98.658	Equus_asinus_asinus
ENSECAG00000014803	GTF3A	76	85.551	ENSEASG00005013216	-	97	77.198	Equus_asinus_asinus
ENSECAG00000014803	GTF3A	86	82.215	ENSEEUG00000004307	GTF3A	96	77.608	Erinaceus_europaeus
ENSECAG00000014803	GTF3A	86	86.913	ENSFCAG00000006982	GTF3A	95	79.707	Felis_catus
ENSECAG00000014803	GTF3A	71	87.705	ENSFDAG00000016841	GTF3A	94	86.184	Fukomys_damarensis
ENSECAG00000014803	GTF3A	71	88.163	ENSHGLG00000004173	GTF3A	94	86.184	Heterocephalus_glaber_female
ENSECAG00000014803	GTF3A	71	88.163	ENSHGLG00100011561	GTF3A	94	86.184	Heterocephalus_glaber_male
ENSECAG00000014803	GTF3A	71	87.347	ENSSTOG00000013853	GTF3A	97	86.184	Ictidomys_tridecemlineatus
ENSECAG00000014803	GTF3A	87	78.333	ENSJJAG00000011501	Gtf3a	100	78.778	Jaculus_jaculus
ENSECAG00000014803	GTF3A	86	79.538	ENSLAFG00000027315	GTF3A	100	80.541	Loxodonta_africana
ENSECAG00000014803	GTF3A	86	76.610	ENSMAUG00000016253	Gtf3a	99	76.087	Mesocricetus_auratus
ENSECAG00000014803	GTF3A	86	85.859	ENSMICG00000014763	GTF3A	99	84.469	Microcebus_murinus
ENSECAG00000014803	GTF3A	86	78.859	MGP_CAROLIEiJ_G0028031	Gtf3a	99	79.614	Mus_caroli
ENSECAG00000014803	GTF3A	86	78.523	ENSMUSG00000016503	Gtf3a	99	79.339	Mus_musculus
ENSECAG00000014803	GTF3A	86	78.261	MGP_PahariEiJ_G0024597	Gtf3a	99	79.396	Mus_pahari
ENSECAG00000014803	GTF3A	86	78.188	MGP_SPRETEiJ_G0029029	Gtf3a	99	79.063	Mus_spretus
ENSECAG00000014803	GTF3A	86	88.926	ENSMPUG00000005835	GTF3A	99	88.462	Mustela_putorius_furo
ENSECAG00000014803	GTF3A	78	91.450	ENSMLUG00000002158	GTF3A	100	90.937	Myotis_lucifugus
ENSECAG00000014803	GTF3A	86	86.913	ENSNLEG00000000331	GTF3A	100	86.027	Nomascus_leucogenys
ENSECAG00000014803	GTF3A	86	53.354	ENSMEUG00000010089	GTF3A	95	59.327	Notamacropus_eugenii
ENSECAG00000014803	GTF3A	81	73.626	ENSOPRG00000000854	-	90	73.077	Ochotona_princeps
ENSECAG00000014803	GTF3A	86	82.155	ENSODEG00000006725	GTF3A	88	81.283	Octodon_degus
ENSECAG00000014803	GTF3A	86	84.459	ENSOCUG00000011713	GTF3A	83	82.967	Oryctolagus_cuniculus
ENSECAG00000014803	GTF3A	86	85.284	ENSOGAG00000014589	GTF3A	100	83.060	Otolemur_garnettii
ENSECAG00000014803	GTF3A	82	77.739	ENSOARG00000012551	GTF3A	95	78.448	Ovis_aries
ENSECAG00000014803	GTF3A	86	87.919	ENSPPRG00000002368	GTF3A	100	87.879	Panthera_pardus
ENSECAG00000014803	GTF3A	86	87.584	ENSPTIG00000018958	GTF3A	82	87.584	Panthera_tigris_altaica
ENSECAG00000014803	GTF3A	86	53.053	ENSPSIG00000011722	GTF3A	99	53.053	Pelodiscus_sinensis
ENSECAG00000014803	GTF3A	86	86.195	ENSPPYG00000005235	GTF3A	99	85.196	Pongo_abelii
ENSECAG00000014803	GTF3A	86	83.502	ENSPCOG00000016742	GTF3A	82	83.516	Propithecus_coquereli
ENSECAG00000014803	GTF3A	86	81.879	ENSPVAG00000012837	GTF3A	87	81.471	Pteropus_vampyrus
ENSECAG00000014803	GTF3A	86	79.195	ENSRROG00000043264	GTF3A	100	79.178	Rhinopithecus_roxellana
ENSECAG00000014803	GTF3A	86	76.174	ENSSHAG00000016965	GTF3A	93	76.431	Sarcophilus_harrisii
ENSECAG00000014803	GTF3A	70	73.802	ENSSARG00000010692	GTF3A	92	70.746	Sorex_araneus
ENSECAG00000014803	GTF3A	86	68.896	ENSSPUG00000005307	GTF3A	88	69.605	Sphenodon_punctatus
ENSECAG00000014803	GTF3A	69	45.607	ENSTRUG00000005241	gtf3ab	89	43.056	Takifugu_rubripes
ENSECAG00000014803	GTF3A	74	87.500	ENSTBEG00000012075	GTF3A	61	87.500	Tupaia_belangeri
ENSECAG00000014803	GTF3A	86	78.716	ENSTTRG00000008538	GTF3A	97	74.250	Tursiops_truncatus
ENSECAG00000014803	GTF3A	86	86.913	ENSUAMG00000019189	GTF3A	100	87.052	Ursus_americanus
ENSECAG00000014803	GTF3A	86	85.619	ENSUMAG00000016941	GTF3A	97	87.671	Ursus_maritimus
ENSECAG00000014803	GTF3A	86	86.149	ENSVPAG00000004995	GTF3A	99	86.149	Vicugna_pacos
ENSECAG00000014803	GTF3A	86	86.288	ENSVVUG00000009197	GTF3A	100	85.440	Vulpes_vulpes