EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000015215 (Gene tree)
Gene ID: 100065744
Gene Symbol: -
Alias: -
Full Name: survival motor neuron protein
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 27106 bases
Position: chr14:93122866-93149971
Accession: 100065744
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000013134	TUDOR	PF00567.24	6.2e-05	1	1
ENSECAP00000013134	SMN	PF06003.12	7.5e-106	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000016268	-	905	-	ENSECAP00000013134	291 (aa)	XP_023474001	F6TME2

Gene Model

Click here to download ENSECAG00000015215's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000015215's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000015215	-	96	87.500	ENSG00000205571	SMN2	90	93.651	Homo_sapiens
ENSECAG00000015215	-	96	87.500	ENSG00000172062	SMN1	90	93.651	Homo_sapiens
ENSECAG00000015215	-	93	53.818	ENSAPOG00000011324	smn1	94	53.091	Acanthochromis_polyacanthus
ENSECAG00000015215	-	97	90.071	ENSAMEG00000003316	-	96	89.691	Ailuropoda_melanoleuca
ENSECAG00000015215	-	89	49.057	ENSACIG00000019772	-	97	48.077	Amphilophus_citrinellus
ENSECAG00000015215	-	93	51.264	ENSAOCG00000024444	smn1	94	51.825	Amphiprion_ocellaris
ENSECAG00000015215	-	93	51.625	ENSAPEG00000016504	smn1	94	52.190	Amphiprion_percula
ENSECAG00000015215	-	90	53.160	ENSATEG00000002182	smn1	79	52.060	Anabas_testudineus
ENSECAG00000015215	-	69	54.187	ENSAPLG00000010912	-	97	54.000	Anas_platyrhynchos
ENSECAG00000015215	-	97	54.671	ENSACAG00000010017	-	95	56.940	Anolis_carolinensis
ENSECAG00000015215	-	99	82.993	ENSANAG00000032133	-	95	84.698	Aotus_nancymaae
ENSECAG00000015215	-	93	49.635	ENSACLG00000007308	smn1	89	50.545	Astatotilapia_calliptera
ENSECAG00000015215	-	97	86.525	ENSBTAG00000005743	SMN2	97	84.752	Bos_taurus
ENSECAG00000015215	-	96	84.698	ENSCJAG00000016290	-	93	88.608	Callithrix_jacchus
ENSECAG00000015215	-	100	89.347	ENSCAFG00000007812	SMN	100	89.003	Canis_familiaris
ENSECAG00000015215	-	99	89.310	ENSCAFG00020019229	-	93	88.966	Canis_lupus_dingo
ENSECAG00000015215	-	97	86.572	ENSCHIG00000015559	-	95	85.159	Capra_hircus
ENSECAG00000015215	-	99	86.505	ENSTSYG00000012058	-	95	91.026	Carlito_syrichta
ENSECAG00000015215	-	77	66.228	ENSCAPG00000011021	-	100	66.228	Cavia_aperea
ENSECAG00000015215	-	99	79.932	ENSCPOG00000012328	-	97	79.514	Cavia_porcellus
ENSECAG00000015215	-	100	79.661	ENSCPOG00000036973	-	96	79.859	Cavia_porcellus
ENSECAG00000015215	-	96	84.643	ENSCCAG00000018127	-	93	88.608	Cebus_capucinus
ENSECAG00000015215	-	96	87.857	ENSCATG00000037002	-	93	89.873	Cercocebus_atys
ENSECAG00000015215	-	100	77.592	ENSCLAG00000000284	-	96	78.671	Chinchilla_lanigera
ENSECAG00000015215	-	96	88.929	ENSCSAG00000015688	-	95	88.929	Chlorocebus_sabaeus
ENSECAG00000015215	-	87	74.603	ENSCHOG00000007346	-	100	74.603	Choloepus_hoffmanni
ENSECAG00000015215	-	99	61.356	ENSCPBG00000010968	-	99	61.624	Chrysemys_picta_bellii
ENSECAG00000015215	-	95	80.427	ENSCANG00000033324	-	91	80.297	Colobus_angolensis_palliatus
ENSECAG00000015215	-	96	89.247	ENSCANG00000038242	-	95	88.889	Colobus_angolensis_palliatus
ENSECAG00000015215	-	100	83.162	ENSCGRG00001017959	-	100	83.162	Cricetulus_griseus_chok1gshd
ENSECAG00000015215	-	100	64.261	ENSCGRG00001016998	-	100	64.605	Cricetulus_griseus_chok1gshd
ENSECAG00000015215	-	100	83.162	ENSCGRG00000007698	Smn1	100	83.162	Cricetulus_griseus_crigri
ENSECAG00000015215	-	93	45.139	ENSCSEG00000015227	smn1	97	47.018	Cynoglossus_semilaevis
ENSECAG00000015215	-	93	51.273	ENSCVAG00000007498	smn1	95	50.719	Cyprinodon_variegatus
ENSECAG00000015215	-	95	49.822	ENSDARG00000018494	smn1	96	51.812	Danio_rerio
ENSECAG00000015215	-	84	83.951	ENSDNOG00000007283	-	100	83.951	Dasypus_novemcinctus
ENSECAG00000015215	-	79	71.179	ENSDNOG00000045949	-	86	72.195	Dasypus_novemcinctus
ENSECAG00000015215	-	97	78.292	ENSDORG00000007082	Smn1	95	77.936	Dipodomys_ordii
ENSECAG00000015215	-	71	72.464	ENSETEG00000001406	-	93	71.875	Echinops_telfairi
ENSECAG00000015215	-	93	38.462	ENSEBUG00000011902	smn1	50	48.611	Eptatretus_burgeri
ENSECAG00000015215	-	93	89.706	ENSEASG00005018000	-	96	89.706	Equus_asinus_asinus
ENSECAG00000015215	-	87	79.762	ENSEEUG00000015777	-	100	79.762	Erinaceus_europaeus
ENSECAG00000015215	-	92	54.804	ENSELUG00000018067	smn1	94	50.362	Esox_lucius
ENSECAG00000015215	-	100	88.660	ENSFCAG00000028292	SMN	100	88.316	Felis_catus
ENSECAG00000015215	-	90	61.509	ENSFALG00000012320	-	91	59.848	Ficedula_albicollis
ENSECAG00000015215	-	100	80.268	ENSFDAG00000017683	-	96	81.185	Fukomys_damarensis
ENSECAG00000015215	-	92	49.630	ENSFHEG00000018508	smn1	96	50.000	Fundulus_heteroclitus
ENSECAG00000015215	-	96	49.104	ENSGMOG00000017279	smn1	93	49.451	Gadus_morhua
ENSECAG00000015215	-	93	59.926	ENSGALG00000002430	SMN	96	56.202	Gallus_gallus
ENSECAG00000015215	-	93	51.812	ENSGAFG00000009501	smn1	94	51.095	Gambusia_affinis
ENSECAG00000015215	-	93	55.515	ENSGACG00000010584	smn1	91	50.730	Gasterosteus_aculeatus
ENSECAG00000015215	-	99	60.068	ENSGAGG00000011374	-	97	60.638	Gopherus_agassizii
ENSECAG00000015215	-	93	38.164	ENSGAGG00000013639	-	56	50.000	Gopherus_agassizii
ENSECAG00000015215	-	95	73.646	ENSGGOG00000003872	-	95	74.157	Gorilla_gorilla
ENSECAG00000015215	-	63	84.699	ENSGGOG00000026704	-	85	84.699	Gorilla_gorilla
ENSECAG00000015215	-	92	50.558	ENSHBUG00000013987	smn1	94	52.555	Haplochromis_burtoni
ENSECAG00000015215	-	100	78.231	ENSHGLG00000001905	-	98	79.359	Heterocephalus_glaber_female
ENSECAG00000015215	-	100	78.930	ENSHGLG00000001018	-	96	79.791	Heterocephalus_glaber_female
ENSECAG00000015215	-	100	78.930	ENSHGLG00100011252	-	96	79.791	Heterocephalus_glaber_male
ENSECAG00000015215	-	96	77.660	ENSHGLG00100018676	-	97	78.810	Heterocephalus_glaber_male
ENSECAG00000015215	-	90	49.265	ENSHCOG00000017136	smn1	87	51.527	Hippocampus_comes
ENSECAG00000015215	-	95	51.079	ENSIPUG00000012580	smn1	86	51.079	Ictalurus_punctatus
ENSECAG00000015215	-	91	87.970	ENSSTOG00000012288	-	96	87.640	Ictidomys_tridecemlineatus
ENSECAG00000015215	-	60	64.368	ENSJJAG00000014853	-	89	64.571	Jaculus_jaculus
ENSECAG00000015215	-	93	52.143	ENSKMAG00000007239	smn1	96	51.145	Kryptolebias_marmoratus
ENSECAG00000015215	-	93	53.430	ENSLBEG00000022550	smn1	94	51.504	Labrus_bergylta
ENSECAG00000015215	-	93	36.364	ENSLACG00000009808	-	52	37.736	Latimeria_chalumnae
ENSECAG00000015215	-	92	53.875	ENSLOCG00000011339	smn1	94	51.812	Lepisosteus_oculatus
ENSECAG00000015215	-	100	84.068	ENSLAFG00000003425	-	96	84.068	Loxodonta_africana
ENSECAG00000015215	-	96	88.929	ENSMFAG00000031523	SMN1	95	88.929	Macaca_fascicularis
ENSECAG00000015215	-	96	84.229	ENSMFAG00000008812	-	95	84.229	Macaca_fascicularis
ENSECAG00000015215	-	96	88.929	ENSMMUG00000020214	SMN1	95	88.929	Macaca_mulatta
ENSECAG00000015215	-	96	83.513	ENSMMUG00000030594	-	95	83.513	Macaca_mulatta
ENSECAG00000015215	-	76	75.566	ENSMNEG00000036423	-	86	75.566	Macaca_nemestrina
ENSECAG00000015215	-	96	88.571	ENSMNEG00000035094	-	95	88.571	Macaca_nemestrina
ENSECAG00000015215	-	96	88.214	ENSMLEG00000041902	-	95	88.214	Mandrillus_leucophaeus
ENSECAG00000015215	-	92	49.817	ENSMAMG00000011034	smn1	58	57.059	Mastacembelus_armatus
ENSECAG00000015215	-	92	50.558	ENSMZEG00005013634	smn1	94	52.190	Maylandia_zebra
ENSECAG00000015215	-	68	55.779	ENSMGAG00000008889	-	95	53.266	Meleagris_gallopavo
ENSECAG00000015215	-	100	81.100	ENSMAUG00000010262	Smn1	100	82.131	Mesocricetus_auratus
ENSECAG00000015215	-	96	74.377	ENSMICG00000034708	-	93	89.610	Microcebus_murinus
ENSECAG00000015215	-	100	82.131	ENSMOCG00000017833	Smn1	100	82.131	Microtus_ochrogaster
ENSECAG00000015215	-	93	48.905	ENSMMOG00000005504	smn1	96	48.014	Mola_mola
ENSECAG00000015215	-	98	70.383	ENSMODG00000001436	-	95	71.025	Monodelphis_domestica
ENSECAG00000015215	-	92	50.182	ENSMALG00000008025	smn1	94	50.730	Monopterus_albus
ENSECAG00000015215	-	100	82.131	MGP_CAROLIEiJ_G0018836	Smn1	100	82.131	Mus_caroli
ENSECAG00000015215	-	100	82.131	ENSMUSG00000021645	Smn1	100	82.131	Mus_musculus
ENSECAG00000015215	-	100	78.007	MGP_PahariEiJ_G0015911	Smn1	100	79.038	Mus_pahari
ENSECAG00000015215	-	100	81.443	MGP_SPRETEiJ_G0019718	Smn1	100	81.443	Mus_spretus
ENSECAG00000015215	-	95	90.614	ENSMPUG00000014470	-	98	90.253	Mustela_putorius_furo
ENSECAG00000015215	-	97	89.199	ENSMLUG00000010603	-	92	89.199	Myotis_lucifugus
ENSECAG00000015215	-	100	82.131	ENSNGAG00000019833	Smn1	100	82.131	Nannospalax_galili
ENSECAG00000015215	-	92	51.825	ENSNBRG00000023000	smn1	94	52.555	Neolamprologus_brichardi
ENSECAG00000015215	-	99	86.301	ENSNLEG00000004454	-	90	93.651	Nomascus_leucogenys
ENSECAG00000015215	-	78	64.912	ENSMEUG00000011393	-	99	65.939	Notamacropus_eugenii
ENSECAG00000015215	-	87	79.447	ENSOPRG00000002015	-	100	80.237	Ochotona_princeps
ENSECAG00000015215	-	95	81.522	ENSODEG00000015976	-	97	81.159	Octodon_degus
ENSECAG00000015215	-	93	51.449	ENSONIG00000011799	smn1	95	52.174	Oreochromis_niloticus
ENSECAG00000015215	-	99	62.069	ENSOANG00000001626	-	96	64.260	Ornithorhynchus_anatinus
ENSECAG00000015215	-	100	78.644	ENSOCUG00000025183	-	96	79.577	Oryctolagus_cuniculus
ENSECAG00000015215	-	99	79.730	ENSOCUG00000026649	-	95	83.158	Oryctolagus_cuniculus
ENSECAG00000015215	-	100	84.247	ENSOCUG00000017097	-	95	85.053	Oryctolagus_cuniculus
ENSECAG00000015215	-	93	51.838	ENSORLG00000010552	smn1	94	51.852	Oryzias_latipes
ENSECAG00000015215	-	93	52.222	ENSORLG00020007936	smn1	59	60.897	Oryzias_latipes_hni
ENSECAG00000015215	-	54	59.615	ENSORLG00015022425	smn1	94	51.111	Oryzias_latipes_hsok
ENSECAG00000015215	-	93	47.183	ENSOMEG00000007824	smn1	94	52.206	Oryzias_melastigma
ENSECAG00000015215	-	92	76.753	ENSOGAG00000031414	-	94	76.753	Otolemur_garnettii
ENSECAG00000015215	-	95	84.420	ENSOARG00000005425	-	100	82.609	Ovis_aries
ENSECAG00000015215	-	96	87.143	ENSPPAG00000036640	-	90	93.651	Pan_paniscus
ENSECAG00000015215	-	100	89.003	ENSPPRG00000005575	-	100	88.660	Panthera_pardus
ENSECAG00000015215	-	100	89.003	ENSPTIG00000007745	-	100	89.003	Panthera_tigris_altaica
ENSECAG00000015215	-	96	86.219	ENSPTRG00000016955	-	90	93.651	Pan_troglodytes
ENSECAG00000015215	-	95	84.058	ENSPANG00000000253	-	93	84.058	Papio_anubis
ENSECAG00000015215	-	99	87.671	ENSPANG00000013601	-	95	88.929	Papio_anubis
ENSECAG00000015215	-	92	52.158	ENSPKIG00000011096	smn1	94	52.416	Paramormyrops_kingsleyae
ENSECAG00000015215	-	93	58.947	ENSPSIG00000014787	-	90	57.193	Pelodiscus_sinensis
ENSECAG00000015215	-	93	46.154	ENSPMGG00000012285	smn1	94	48.302	Periophthalmus_magnuspinnatus
ENSECAG00000015215	-	97	40.972	ENSPMAG00000005004	smn1	91	39.630	Petromyzon_marinus
ENSECAG00000015215	-	98	71.080	ENSPCIG00000025764	-	97	72.085	Phascolarctos_cinereus
ENSECAG00000015215	-	93	52.747	ENSPFOG00000007786	smn1	94	51.292	Poecilia_formosa
ENSECAG00000015215	-	93	53.114	ENSPLAG00000012071	smn1	94	51.661	Poecilia_latipinna
ENSECAG00000015215	-	93	52.747	ENSPMEG00000017085	smn1	94	51.292	Poecilia_mexicana
ENSECAG00000015215	-	93	53.455	ENSPREG00000005824	smn1	94	52.206	Poecilia_reticulata
ENSECAG00000015215	-	92	85.768	ENSPPYG00000015533	-	96	85.768	Pongo_abelii
ENSECAG00000015215	-	86	54.183	ENSPPYG00000019189	-	99	53.785	Pongo_abelii
ENSECAG00000015215	-	92	79.779	ENSPCAG00000004187	-	100	79.412	Procavia_capensis
ENSECAG00000015215	-	90	67.925	ENSPCOG00000022307	-	100	69.811	Propithecus_coquereli
ENSECAG00000015215	-	97	91.489	ENSPVAG00000005977	-	96	91.135	Pteropus_vampyrus
ENSECAG00000015215	-	92	51.825	ENSPNYG00000014148	smn1	94	52.555	Pundamilia_nyererei
ENSECAG00000015215	-	93	48.736	ENSPNAG00000014007	smn1	83	48.921	Pygocentrus_nattereri
ENSECAG00000015215	-	100	80.822	ENSRNOG00000018067	Smn1	100	80.822	Rattus_norvegicus
ENSECAG00000015215	-	93	74.725	ENSRBIG00000036775	-	90	75.836	Rhinopithecus_bieti
ENSECAG00000015215	-	96	89.606	ENSRBIG00000037052	-	95	89.606	Rhinopithecus_bieti
ENSECAG00000015215	-	98	73.333	ENSRROG00000031088	-	94	74.377	Rhinopithecus_roxellana
ENSECAG00000015215	-	96	89.606	ENSRROG00000039399	-	95	89.606	Rhinopithecus_roxellana
ENSECAG00000015215	-	96	82.857	ENSSBOG00000011665	-	93	87.342	Saimiri_boliviensis_boliviensis
ENSECAG00000015215	-	84	78.486	ENSSBOG00000020112	-	87	78.884	Saimiri_boliviensis_boliviensis
ENSECAG00000015215	-	100	70.307	ENSSHAG00000001499	-	100	69.784	Sarcophilus_harrisii
ENSECAG00000015215	-	93	50.719	ENSSFOG00015015507	smn1	94	51.799	Scleropages_formosus
ENSECAG00000015215	-	93	51.825	ENSSMAG00000007922	smn1	94	51.095	Scophthalmus_maximus
ENSECAG00000015215	-	93	51.799	ENSSDUG00000018533	smn1	94	51.812	Seriola_dumerili
ENSECAG00000015215	-	93	52.158	ENSSLDG00000021135	smn1	94	52.174	Seriola_lalandi_dorsalis
ENSECAG00000015215	-	96	63.214	ENSSPUG00000000373	-	93	64.945	Sphenodon_punctatus
ENSECAG00000015215	-	93	53.047	ENSSPAG00000004345	smn1	94	52.536	Stegastes_partitus
ENSECAG00000015215	-	97	89.716	ENSSSCG00000016970	-	96	89.362	Sus_scrofa
ENSECAG00000015215	-	74	57.209	ENSSSCG00000033865	-	92	58.571	Sus_scrofa
ENSECAG00000015215	-	97	67.376	ENSSSCG00000029127	-	94	67.376	Sus_scrofa
ENSECAG00000015215	-	95	58.993	ENSTGUG00000001548	-	96	60.526	Taeniopygia_guttata
ENSECAG00000015215	-	51	60.544	ENSTRUG00000000736	smn	95	49.091	Takifugu_rubripes
ENSECAG00000015215	-	93	50.704	ENSTNIG00000009892	smn1	95	49.645	Tetraodon_nigroviridis
ENSECAG00000015215	-	66	84.896	ENSTBEG00000002399	-	93	84.896	Tupaia_belangeri
ENSECAG00000015215	-	97	84.397	ENSTTRG00000005080	-	95	85.461	Tursiops_truncatus
ENSECAG00000015215	-	63	90.164	ENSUAMG00000024947	-	70	90.104	Ursus_americanus
ENSECAG00000015215	-	97	90.780	ENSUMAG00000007842	-	74	90.378	Ursus_maritimus
ENSECAG00000015215	-	92	76.404	ENSVPAG00000009887	-	95	76.404	Vicugna_pacos
ENSECAG00000015215	-	100	89.347	ENSVVUG00000006934	-	100	89.003	Vulpes_vulpes
ENSECAG00000015215	-	91	36.655	ENSXETG00000004912	-	78	63.934	Xenopus_tropicalis
ENSECAG00000015215	-	95	53.737	ENSXETG00000018189	smn2	95	50.871	Xenopus_tropicalis
ENSECAG00000015215	-	93	52.158	ENSXMAG00000001521	smn1	95	51.087	Xiphophorus_maculatus