EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000015703 (Gene tree)
Gene ID: 100057293
Gene Symbol: RRP1
Alias: -
Full Name: ribosomal RNA processing 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 49940 bases
Position: chr26:40340638-40390577
Accession: 22586
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000041471	Nop52	PF05997.12	1.5e-66	1	1
ENSECAP00000031903	Nop52	PF05997.12	1.7e-66	1	1
ENSECAP00000013571	Nop52	PF05997.12	1.8e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000042923	-	2401	-	ENSECAP00000031903	466 (aa)	XP_014591896	UPI000717C565
ENSECAT00000054144	-	1698	-	ENSECAP00000041471	443 (aa)	XP_001916698	UPI000717D0FF
ENSECAT00000016782	-	1308	-	ENSECAP00000013571	435 (aa)	-	F6UDN9

Gene Model

Click here to download ENSECAG00000015703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000015703's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000015703	RRP1	83	51.323	ENSECAG00000018018	RRP1B	50	50.532

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000015703	RRP1	100	70.716	ENSG00000160214	RRP1	98	93.182	Homo_sapiens
ENSECAG00000015703	RRP1	81	51.093	ENSAMEG00000011401	RRP1B	50	50.000	Ailuropoda_melanoleuca
ENSECAG00000015703	RRP1	100	73.407	ENSAMEG00000011448	RRP1	98	72.788	Ailuropoda_melanoleuca
ENSECAG00000015703	RRP1	65	49.129	ENSACIG00000019121	rrp1	77	37.852	Amphilophus_citrinellus
ENSECAG00000015703	RRP1	91	47.901	ENSAOCG00000017894	-	87	47.654	Amphiprion_ocellaris
ENSECAG00000015703	RRP1	77	51.895	ENSAPLG00000004310	RRP1B	51	46.612	Anas_platyrhynchos
ENSECAG00000015703	RRP1	84	52.910	ENSACAG00000017851	RRP1B	50	45.966	Anolis_carolinensis
ENSECAG00000015703	RRP1	100	67.249	ENSANAG00000037815	RRP1	99	68.341	Aotus_nancymaae
ENSECAG00000015703	RRP1	100	69.977	ENSBTAG00000003981	RRP1	98	70.136	Bos_taurus
ENSECAG00000015703	RRP1	83	48.021	ENSBTAG00000017418	RRP1B	59	44.218	Bos_taurus
ENSECAG00000015703	RRP1	94	71.233	ENSCJAG00000043205	RRP1	89	71.982	Callithrix_jacchus
ENSECAG00000015703	RRP1	83	49.869	ENSCJAG00000017077	RRP1B	50	49.344	Callithrix_jacchus
ENSECAG00000015703	RRP1	100	73.111	ENSCAFG00000010646	RRP1	98	73.333	Canis_familiaris
ENSECAG00000015703	RRP1	100	73.111	ENSCAFG00020018979	RRP1	98	73.333	Canis_lupus_dingo
ENSECAG00000015703	RRP1	83	52.381	ENSCAFG00020018901	RRP1B	52	49.100	Canis_lupus_dingo
ENSECAG00000015703	RRP1	85	49.091	ENSCHIG00000021519	RRP1B	54	47.030	Capra_hircus
ENSECAG00000015703	RRP1	99	71.719	ENSCHIG00000020948	RRP1	98	71.719	Capra_hircus
ENSECAG00000015703	RRP1	99	67.261	ENSTSYG00000012831	RRP1	97	67.406	Carlito_syrichta
ENSECAG00000015703	RRP1	68	68.598	ENSCAPG00000008576	RRP1	97	57.868	Cavia_aperea
ENSECAG00000015703	RRP1	77	48.588	ENSCPOG00000002396	RRP1B	52	44.792	Cavia_porcellus
ENSECAG00000015703	RRP1	99	68.243	ENSCPOG00000038986	RRP1	97	67.720	Cavia_porcellus
ENSECAG00000015703	RRP1	100	71.121	ENSCCAG00000029828	RRP1	99	71.121	Cebus_capucinus
ENSECAG00000015703	RRP1	83	50.785	ENSCCAG00000029384	RRP1B	56	49.602	Cebus_capucinus
ENSECAG00000015703	RRP1	100	70.065	ENSCATG00000015632	RRP1	99	70.690	Cercocebus_atys
ENSECAG00000015703	RRP1	96	70.507	ENSCLAG00000011639	RRP1	98	68.514	Chinchilla_lanigera
ENSECAG00000015703	RRP1	74	78.378	ENSCSAG00000007936	RRP1	100	78.378	Chlorocebus_sabaeus
ENSECAG00000015703	RRP1	74	43.544	ENSCHOG00000002426	-	54	42.169	Choloepus_hoffmanni
ENSECAG00000015703	RRP1	77	60.997	ENSCPBG00000010310	RRP1B	52	52.471	Chrysemys_picta_bellii
ENSECAG00000015703	RRP1	76	34.985	ENSCING00000003304	-	70	33.033	Ciona_intestinalis
ENSECAG00000015703	RRP1	92	62.687	ENSCANG00000042611	RRP1	84	62.624	Colobus_angolensis_palliatus
ENSECAG00000015703	RRP1	84	50.769	ENSCANG00000040952	RRP1B	51	50.388	Colobus_angolensis_palliatus
ENSECAG00000015703	RRP1	99	67.421	ENSCGRG00001011920	Rrp1	97	66.136	Cricetulus_griseus_chok1gshd
ENSECAG00000015703	RRP1	74	54.545	ENSCGRG00001023882	-	55	68.254	Cricetulus_griseus_chok1gshd
ENSECAG00000015703	RRP1	74	53.754	ENSCGRG00001010889	-	52	48.622	Cricetulus_griseus_chok1gshd
ENSECAG00000015703	RRP1	99	67.421	ENSCGRG00000008915	Rrp1	97	66.136	Cricetulus_griseus_crigri
ENSECAG00000015703	RRP1	85	48.942	ENSCSEG00000020711	-	70	48.942	Cynoglossus_semilaevis
ENSECAG00000015703	RRP1	77	48.547	ENSCVAG00000017568	-	86	48.094	Cyprinodon_variegatus
ENSECAG00000015703	RRP1	76	47.059	ENSDARG00000103337	rrp1	55	42.092	Danio_rerio
ENSECAG00000015703	RRP1	83	50.656	ENSDNOG00000032774	RRP1B	50	49.471	Dasypus_novemcinctus
ENSECAG00000015703	RRP1	100	68.352	ENSDNOG00000019880	RRP1	98	68.352	Dasypus_novemcinctus
ENSECAG00000015703	RRP1	91	62.963	ENSDORG00000002104	Rrp1	97	63.457	Dipodomys_ordii
ENSECAG00000015703	RRP1	74	63.473	ENSETEG00000002963	-	95	52.941	Echinops_telfairi
ENSECAG00000015703	RRP1	100	98.646	ENSEASG00005001673	RRP1	100	98.646	Equus_asinus_asinus
ENSECAG00000015703	RRP1	83	51.323	ENSEASG00005001687	RRP1B	50	50.532	Equus_asinus_asinus
ENSECAG00000015703	RRP1	95	43.267	ENSELUG00000015885	-	97	43.016	Esox_lucius
ENSECAG00000015703	RRP1	93	77.616	ENSFCAG00000008434	RRP1	97	75.227	Felis_catus
ENSECAG00000015703	RRP1	69	47.419	ENSFDAG00000010899	RRP1B	55	41.205	Fukomys_damarensis
ENSECAG00000015703	RRP1	99	67.043	ENSFDAG00000013728	RRP1	97	67.043	Fukomys_damarensis
ENSECAG00000015703	RRP1	77	46.765	ENSGMOG00000001953	-	54	43.666	Gadus_morhua
ENSECAG00000015703	RRP1	84	54.712	ENSGALG00000035696	RRP1B	53	50.000	Gallus_gallus
ENSECAG00000015703	RRP1	85	43.979	ENSGACG00000001438	rrp1	52	47.059	Gasterosteus_aculeatus
ENSECAG00000015703	RRP1	77	60.117	ENSGAGG00000000375	RRP1B	52	52.985	Gopherus_agassizii
ENSECAG00000015703	RRP1	100	71.150	ENSGGOG00000000173	RRP1	99	71.552	Gorilla_gorilla
ENSECAG00000015703	RRP1	96	68.706	ENSHGLG00000017085	RRP1	92	67.808	Heterocephalus_glaber_female
ENSECAG00000015703	RRP1	84	47.558	ENSHGLG00000004968	RRP1B	61	44.575	Heterocephalus_glaber_female
ENSECAG00000015703	RRP1	75	42.857	ENSHGLG00100002232	RRP1B	52	40.997	Heterocephalus_glaber_male
ENSECAG00000015703	RRP1	76	47.143	ENSIPUG00000000673	-	78	39.709	Ictalurus_punctatus
ENSECAG00000015703	RRP1	98	69.526	ENSSTOG00000011116	RRP1	98	68.793	Ictidomys_tridecemlineatus
ENSECAG00000015703	RRP1	77	50.847	ENSSTOG00000011790	RRP1B	53	47.656	Ictidomys_tridecemlineatus
ENSECAG00000015703	RRP1	73	46.921	ENSJJAG00000021279	Rrp1b	54	40.049	Jaculus_jaculus
ENSECAG00000015703	RRP1	99	69.213	ENSJJAG00000018886	Rrp1	97	68.539	Jaculus_jaculus
ENSECAG00000015703	RRP1	75	48.851	ENSKMAG00000005539	rrp1	66	41.871	Kryptolebias_marmoratus
ENSECAG00000015703	RRP1	77	44.538	ENSLBEG00000021417	RRP1	98	43.257	Labrus_bergylta
ENSECAG00000015703	RRP1	83	52.255	ENSLACG00000017332	-	51	50.646	Latimeria_chalumnae
ENSECAG00000015703	RRP1	75	52.367	ENSLOCG00000004064	-	57	45.116	Lepisosteus_oculatus
ENSECAG00000015703	RRP1	94	48.700	ENSLAFG00000000766	RRP1B	95	47.170	Loxodonta_africana
ENSECAG00000015703	RRP1	100	73.737	ENSLAFG00000022901	RRP1	98	65.721	Loxodonta_africana
ENSECAG00000015703	RRP1	100	69.414	ENSMFAG00000003202	RRP1	99	69.612	Macaca_fascicularis
ENSECAG00000015703	RRP1	83	51.842	ENSMMUG00000000104	RRP1B	50	51.194	Macaca_mulatta
ENSECAG00000015703	RRP1	100	70.346	ENSMMUG00000012304	RRP1	99	69.197	Macaca_mulatta
ENSECAG00000015703	RRP1	100	69.197	ENSMNEG00000031210	RRP1	99	69.397	Macaca_nemestrina
ENSECAG00000015703	RRP1	93	66.667	ENSMLEG00000037797	RRP1	99	68.235	Mandrillus_leucophaeus
ENSECAG00000015703	RRP1	84	53.403	ENSMGAG00000014591	RRP1B	53	50.240	Meleagris_gallopavo
ENSECAG00000015703	RRP1	73	52.615	ENSMAUG00000021508	Rrp1b	54	43.890	Mesocricetus_auratus
ENSECAG00000015703	RRP1	90	59.102	ENSMAUG00000017653	Rrp1	97	55.705	Mesocricetus_auratus
ENSECAG00000015703	RRP1	100	71.460	ENSMICG00000004700	RRP1	98	69.933	Microcebus_murinus
ENSECAG00000015703	RRP1	83	50.928	ENSMICG00000004686	RRP1B	56	47.143	Microcebus_murinus
ENSECAG00000015703	RRP1	99	54.037	ENSMOCG00000015687	Rrp1	97	50.636	Microtus_ochrogaster
ENSECAG00000015703	RRP1	74	49.852	ENSMOCG00000001117	Rrp1b	51	44.503	Microtus_ochrogaster
ENSECAG00000015703	RRP1	77	46.243	ENSMMOG00000019175	rrp1	86	46.532	Mola_mola
ENSECAG00000015703	RRP1	78	62.356	ENSMODG00000021036	-	52	61.714	Monodelphis_domestica
ENSECAG00000015703	RRP1	77	55.102	ENSMODG00000021033	RRP1B	54	48.434	Monodelphis_domestica
ENSECAG00000015703	RRP1	77	49.708	ENSMALG00000010310	rrp1	88	48.246	Monopterus_albus
ENSECAG00000015703	RRP1	74	50.000	MGP_CAROLIEiJ_G0021376	Rrp1b	53	65.079	Mus_caroli
ENSECAG00000015703	RRP1	99	58.350	MGP_CAROLIEiJ_G0015508	Rrp1	62	80.349	Mus_caroli
ENSECAG00000015703	RRP1	74	51.064	ENSMUSG00000058392	Rrp1b	53	66.667	Mus_musculus
ENSECAG00000015703	RRP1	99	59.155	ENSMUSG00000061032	Rrp1	80	79.913	Mus_musculus
ENSECAG00000015703	RRP1	74	51.672	MGP_PahariEiJ_G0023695	Rrp1b	53	65.079	Mus_pahari
ENSECAG00000015703	RRP1	99	59.319	MGP_PahariEiJ_G0030921	Rrp1	63	80.349	Mus_pahari
ENSECAG00000015703	RRP1	74	51.829	MGP_SPRETEiJ_G0022290	Rrp1b	53	66.667	Mus_spretus
ENSECAG00000015703	RRP1	99	76.800	MGP_SPRETEiJ_G0016321	Rrp1	80	79.913	Mus_spretus
ENSECAG00000015703	RRP1	72	44.985	ENSMPUG00000009810	RRP1B	51	43.939	Mustela_putorius_furo
ENSECAG00000015703	RRP1	92	66.810	ENSMPUG00000009826	RRP1	86	80.576	Mustela_putorius_furo
ENSECAG00000015703	RRP1	90	87.336	ENSMLUG00000017788	RRP1	90	77.899	Myotis_lucifugus
ENSECAG00000015703	RRP1	83	51.969	ENSMLUG00000007738	RRP1B	50	51.969	Myotis_lucifugus
ENSECAG00000015703	RRP1	99	51.626	ENSNGAG00000022344	Rrp1	56	88.571	Nannospalax_galili
ENSECAG00000015703	RRP1	83	46.475	ENSNGAG00000021073	Rrp1b	52	44.010	Nannospalax_galili
ENSECAG00000015703	RRP1	83	51.842	ENSNLEG00000001490	RRP1B	51	51.194	Nomascus_leucogenys
ENSECAG00000015703	RRP1	100	69.414	ENSNLEG00000034734	RRP1	99	69.828	Nomascus_leucogenys
ENSECAG00000015703	RRP1	61	70.796	ENSMEUG00000003226	-	52	70.796	Notamacropus_eugenii
ENSECAG00000015703	RRP1	82	64.738	ENSOPRG00000001319	RRP1	100	65.014	Ochotona_princeps
ENSECAG00000015703	RRP1	69	48.525	ENSONIG00000004264	rrp1	56	38.631	Oreochromis_niloticus
ENSECAG00000015703	RRP1	75	61.446	ENSOANG00000006472	-	93	57.754	Ornithorhynchus_anatinus
ENSECAG00000015703	RRP1	56	76.974	ENSOCUG00000022843	-	77	79.433	Oryctolagus_cuniculus
ENSECAG00000015703	RRP1	82	49.057	ENSORLG00020007199	-	50	44.804	Oryzias_latipes_hni
ENSECAG00000015703	RRP1	85	47.287	ENSOMEG00000016910	-	51	44.235	Oryzias_melastigma
ENSECAG00000015703	RRP1	88	74.046	ENSOGAG00000006105	RRP1	98	68.151	Otolemur_garnettii
ENSECAG00000015703	RRP1	74	52.727	ENSOGAG00000009872	RRP1B	58	48.021	Otolemur_garnettii
ENSECAG00000015703	RRP1	100	66.892	ENSOARG00000011434	RRP1	98	67.494	Ovis_aries
ENSECAG00000015703	RRP1	78	47.278	ENSOARG00000011314	RRP1B	52	46.133	Ovis_aries
ENSECAG00000015703	RRP1	100	70.933	ENSPPAG00000029050	RRP1	99	71.336	Pan_paniscus
ENSECAG00000015703	RRP1	93	76.642	ENSPPRG00000010656	RRP1	97	74.318	Panthera_pardus
ENSECAG00000015703	RRP1	86	65.116	ENSPTIG00000019473	RRP1	87	64.858	Panthera_tigris_altaica
ENSECAG00000015703	RRP1	100	70.716	ENSPTRG00000013962	RRP1	99	71.121	Pan_troglodytes
ENSECAG00000015703	RRP1	100	68.764	ENSPANG00000015097	RRP1	99	69.197	Papio_anubis
ENSECAG00000015703	RRP1	80	57.300	ENSPSIG00000008152	RRP1B	52	51.435	Pelodiscus_sinensis
ENSECAG00000015703	RRP1	77	40.510	ENSPMGG00000007512	-	84	39.377	Periophthalmus_magnuspinnatus
ENSECAG00000015703	RRP1	74	51.515	ENSPEMG00000022490	Rrp1b	50	46.400	Peromyscus_maniculatus_bairdii
ENSECAG00000015703	RRP1	90	70.250	ENSPEMG00000018421	Rrp1	97	67.500	Peromyscus_maniculatus_bairdii
ENSECAG00000015703	RRP1	83	53.826	ENSPCIG00000015513	RRP1B	61	47.856	Phascolarctos_cinereus
ENSECAG00000015703	RRP1	99	54.767	ENSPCIG00000015523	-	80	58.961	Phascolarctos_cinereus
ENSECAG00000015703	RRP1	91	46.283	ENSPFOG00000007424	-	53	46.135	Poecilia_formosa
ENSECAG00000015703	RRP1	100	70.499	ENSPPYG00000011474	RRP1	99	70.905	Pongo_abelii
ENSECAG00000015703	RRP1	81	56.630	ENSPCAG00000008370	-	99	57.560	Procavia_capensis
ENSECAG00000015703	RRP1	99	68.736	ENSPCOG00000017706	RRP1	98	67.257	Propithecus_coquereli
ENSECAG00000015703	RRP1	83	51.058	ENSPCOG00000017927	RRP1B	56	46.667	Propithecus_coquereli
ENSECAG00000015703	RRP1	83	61.429	ENSPVAG00000009925	-	81	61.429	Pteropus_vampyrus
ENSECAG00000015703	RRP1	99	63.453	ENSRNOG00000001203	Rrp1	98	63.901	Rattus_norvegicus
ENSECAG00000015703	RRP1	74	51.205	ENSRNOG00000001194	Rrp1b	51	45.547	Rattus_norvegicus
ENSECAG00000015703	RRP1	100	68.980	ENSRBIG00000032082	RRP1	99	69.612	Rhinopithecus_bieti
ENSECAG00000015703	RRP1	100	69.197	ENSRROG00000039799	RRP1	99	69.612	Rhinopithecus_roxellana
ENSECAG00000015703	RRP1	83	51.842	ENSRROG00000031499	RRP1B	54	51.194	Rhinopithecus_roxellana
ENSECAG00000015703	RRP1	92	73.775	ENSSBOG00000034689	RRP1	99	70.354	Saimiri_boliviensis_boliviensis
ENSECAG00000015703	RRP1	75	59.327	ENSSHAG00000010304	-	99	59.633	Sarcophilus_harrisii
ENSECAG00000015703	RRP1	71	48.338	ENSSFOG00015003932	-	64	41.080	Scleropages_formosus
ENSECAG00000015703	RRP1	76	51.297	ENSSMAG00000016847	-	80	50.617	Scophthalmus_maximus
ENSECAG00000015703	RRP1	87	50.370	ENSSPUG00000002834	RRP1B	53	48.219	Sphenodon_punctatus
ENSECAG00000015703	RRP1	80	52.473	ENSSSCG00000021698	RRP1B	55	50.964	Sus_scrofa
ENSECAG00000015703	RRP1	100	72.483	ENSSSCG00000037061	RRP1	98	71.973	Sus_scrofa
ENSECAG00000015703	RRP1	77	51.020	ENSTRUG00000017592	rrp1	97	50.292	Takifugu_rubripes
ENSECAG00000015703	RRP1	94	42.760	ENSTNIG00000005053	rrp1	69	43.311	Tetraodon_nigroviridis
ENSECAG00000015703	RRP1	67	72.903	ENSTBEG00000001260	-	64	72.414	Tupaia_belangeri
ENSECAG00000015703	RRP1	82	49.185	ENSTBEG00000000422	RRP1B	62	44.828	Tupaia_belangeri
ENSECAG00000015703	RRP1	72	75.980	ENSTTRG00000011162	RRP1	78	75.980	Tursiops_truncatus
ENSECAG00000015703	RRP1	84	50.656	ENSTTRG00000000723	RRP1B	60	45.638	Tursiops_truncatus
ENSECAG00000015703	RRP1	83	51.467	ENSUAMG00000026765	RRP1B	55	50.133	Ursus_americanus
ENSECAG00000015703	RRP1	74	68.580	ENSUAMG00000014189	-	97	65.476	Ursus_americanus
ENSECAG00000015703	RRP1	92	72.549	ENSUMAG00000025507	RRP1	98	68.782	Ursus_maritimus
ENSECAG00000015703	RRP1	76	49.704	ENSUMAG00000025510	RRP1B	65	48.094	Ursus_maritimus
ENSECAG00000015703	RRP1	70	66.990	ENSVVUG00000024498	-	77	67.638	Vulpes_vulpes
ENSECAG00000015703	RRP1	73	51.703	ENSXETG00000013683	rrp1b	50	49.541	Xenopus_tropicalis