EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSECAG00000015900 (Gene tree)
Gene ID
100146677
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Equus_caballus
Status
putative
Strand
Minus strand
Length
40538 bases
Position
chr5:44448437-44488974
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSECAP00000040747RNA_pol_3_Rpc31PF11705.81.7e-2711
ENSECAP00000013583RNA_pol_3_Rpc31PF11705.81.8e-2612
ENSECAP00000013583RNA_pol_3_Rpc31PF11705.81.8e-2622
ENSECAP00000043869RNA_pol_3_Rpc31PF11705.87.1e-2111
ENSECAP00000046434RNA_pol_3_Rpc31PF11705.81.9e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSECAT00000038272-962-ENSECAP00000043869183 (aa)--
ENSECAT00000016795-588-ENSECAP00000013583195 (aa)-F6UDC2
ENSECAT00000063503-1814-ENSECAP00000046434266 (aa)--
ENSECAT00000058153-645-ENSECAP00000040747214 (aa)--
Gene Model
Click here to download ENSECAG00000015900's gene model file
Pathways
Pathway IDPathway NameSource
ecb03020RNA polymeraseKEGG
ecb04623Cytosolic DNA-sensing pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000015900's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSECAG00000015900-6458.475ENSCSEG00000020402-5758.333Cynoglossus_semilaevis
ENSECAG00000015900-8590.385ENSETEG00000008407-10071.233Echinops_telfairi
ENSECAG00000015900-6250.442ENSEASG00005019647-5150.980Equus_asinus_asinus
ENSECAG00000015900-7890.210ENSLAFG00000011013-10065.753Loxodonta_africana
ENSECAG00000015900-7393.985ENSMAUG00000007964-100100.000Mesocricetus_auratus
ENSECAG00000015900-9853.488ENSMMOG00000011671-9452.913Mola_mola
ENSECAG00000015900-9836.697ENSMODG00000020218-9533.810Monodelphis_domestica
ENSECAG00000015900-8494.805ENSMODG00000018754-10075.799Monodelphis_domestica
ENSECAG00000015900-9461.881ENSPKIG00000013127-7959.406Paramormyrops_kingsleyae
ENSECAG00000015900-9747.692ENSPMGG00000012296-9541.294Periophthalmus_magnuspinnatus
ENSECAG00000015900-8660.976ENSPMAG00000001964-8058.861Petromyzon_marinus
ENSECAG00000015900-9460.563ENSSFOG00015010803polr3gl9661.972Scleropages_formosus
ENSECAG00000015900-9340.865ENSTNIG00000009895-9436.232Tetraodon_nigroviridis
ENSECAG00000015900-9532.127ENSTBEG00000002278-5047.934Tupaia_belangeri
ENSECAG00000015900-6998.425ENSTTRG00000017113-62100.000Tursiops_truncatus
ENSECAG00000015900-9487.317ENSVPAG00000010608-9486.829Vicugna_pacos
ENSECAG00000015900-9869.091ENSXETG00000011053polr3gl9565.854Xenopus_tropicalis

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