EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000015973 (Gene tree)
Gene ID: 100059280
Gene Symbol: RCL1
Alias: -
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 68787 bases
Position: chr23:25669428-25738214
Accession: 22271
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000013757	RTC	PF01137.21	9.2e-62	1	1
ENSECAP00000034439	RTC	PF01137.21	1.8e-57	1	1
ENSECAP00000043344	RTC	PF01137.21	1.8e-57	1	1
ENSECAP00000034439	RTC_insert	PF05189.13	3.3e-37	1	1
ENSECAP00000043344	RTC_insert	PF05189.13	3.3e-37	1	1
ENSECAP00000013757	RTC_insert	PF05189.13	3.9e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000016989	-	1122	-	ENSECAP00000013757	373 (aa)	XP_023483076	F6V831
ENSECAT00000046530	-	2068	-	ENSECAP00000043344	355 (aa)	XP_023483077	UPI000C9E6937
ENSECAT00000030561	-	2011	-	ENSECAP00000034439	355 (aa)	XP_023483077	UPI000C9E6937

Gene Model

Click here to download ENSECAG00000015973's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000015973's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000015973	RCL1	100	97.855	ENSG00000120158	RCL1	100	97.855	Homo_sapiens
ENSECAG00000015973	RCL1	100	78.877	ENSAPOG00000015666	rcl1	100	78.877	Acanthochromis_polyacanthus
ENSECAG00000015973	RCL1	100	97.319	ENSAMEG00000002631	RCL1	100	97.319	Ailuropoda_melanoleuca
ENSECAG00000015973	RCL1	99	78.649	ENSACIG00000021195	rcl1	99	78.649	Amphilophus_citrinellus
ENSECAG00000015973	RCL1	100	78.075	ENSAOCG00000002223	rcl1	100	78.075	Amphiprion_ocellaris
ENSECAG00000015973	RCL1	100	78.342	ENSAPEG00000006905	rcl1	100	78.342	Amphiprion_percula
ENSECAG00000015973	RCL1	99	75.946	ENSATEG00000020026	rcl1	99	75.946	Anabas_testudineus
ENSECAG00000015973	RCL1	88	86.280	ENSAPLG00000006031	RCL1	100	86.280	Anas_platyrhynchos
ENSECAG00000015973	RCL1	100	85.523	ENSACAG00000003640	RCL1	100	85.523	Anolis_carolinensis
ENSECAG00000015973	RCL1	100	97.051	ENSANAG00000037372	RCL1	100	97.051	Aotus_nancymaae
ENSECAG00000015973	RCL1	99	78.649	ENSACLG00000021724	rcl1	99	78.649	Astatotilapia_calliptera
ENSECAG00000015973	RCL1	98	78.804	ENSAMXG00000033394	rcl1	99	78.804	Astyanax_mexicanus
ENSECAG00000015973	RCL1	91	30.303	ENSAMXG00000043271	rtca	88	30.303	Astyanax_mexicanus
ENSECAG00000015973	RCL1	99	46.809	WBGene00022852	ZK1127.5	99	46.809	Caenorhabditis_elegans
ENSECAG00000015973	RCL1	100	97.587	ENSCJAG00000011202	RCL1	100	97.587	Callithrix_jacchus
ENSECAG00000015973	RCL1	100	96.515	ENSCAFG00000002091	RCL1	100	96.515	Canis_familiaris
ENSECAG00000015973	RCL1	100	96.515	ENSCAFG00020000638	RCL1	78	96.515	Canis_lupus_dingo
ENSECAG00000015973	RCL1	100	96.515	ENSCHIG00000012407	RCL1	100	96.515	Capra_hircus
ENSECAG00000015973	RCL1	88	97.554	ENSTSYG00000009592	RCL1	97	96.685	Carlito_syrichta
ENSECAG00000015973	RCL1	68	81.503	ENSCAPG00000013575	RCL1	100	81.503	Cavia_aperea
ENSECAG00000015973	RCL1	100	97.587	ENSCPOG00000015354	RCL1	100	97.587	Cavia_porcellus
ENSECAG00000015973	RCL1	100	97.587	ENSCCAG00000033505	RCL1	100	97.587	Cebus_capucinus
ENSECAG00000015973	RCL1	100	97.051	ENSCATG00000034721	RCL1	100	97.051	Cercocebus_atys
ENSECAG00000015973	RCL1	100	96.515	ENSCLAG00000007445	RCL1	100	96.515	Chinchilla_lanigera
ENSECAG00000015973	RCL1	100	97.319	ENSCSAG00000008811	RCL1	100	97.319	Chlorocebus_sabaeus
ENSECAG00000015973	RCL1	91	82.043	ENSCHOG00000007216	RCL1	100	82.043	Choloepus_hoffmanni
ENSECAG00000015973	RCL1	100	89.544	ENSCPBG00000025481	RCL1	94	89.666	Chrysemys_picta_bellii
ENSECAG00000015973	RCL1	95	30.352	ENSCING00000007875	-	84	30.915	Ciona_intestinalis
ENSECAG00000015973	RCL1	98	58.378	ENSCING00000019565	-	98	58.378	Ciona_intestinalis
ENSECAG00000015973	RCL1	88	31.230	ENSCSAVG00000007269	-	84	31.132	Ciona_savignyi
ENSECAG00000015973	RCL1	100	97.587	ENSCANG00000027099	RCL1	100	97.587	Colobus_angolensis_palliatus
ENSECAG00000015973	RCL1	100	95.442	ENSCGRG00001013748	Rcl1	100	95.442	Cricetulus_griseus_chok1gshd
ENSECAG00000015973	RCL1	88	95.122	ENSCGRG00000005843	Rcl1	99	95.122	Cricetulus_griseus_crigri
ENSECAG00000015973	RCL1	99	78.919	ENSCSEG00000000712	rcl1	97	78.919	Cynoglossus_semilaevis
ENSECAG00000015973	RCL1	99	80.000	ENSCVAG00000011536	rcl1	99	80.000	Cyprinodon_variegatus
ENSECAG00000015973	RCL1	98	76.567	ENSDARG00000038312	rcl1	100	76.567	Danio_rerio
ENSECAG00000015973	RCL1	71	96.226	ENSDNOG00000019911	RCL1	100	96.744	Dasypus_novemcinctus
ENSECAG00000015973	RCL1	100	95.979	ENSDORG00000015645	Rcl1	100	95.979	Dipodomys_ordii
ENSECAG00000015973	RCL1	99	53.704	FBgn0020909	Rtc1	98	53.704	Drosophila_melanogaster
ENSECAG00000015973	RCL1	88	64.220	ENSETEG00000014087	-	82	100.000	Echinops_telfairi
ENSECAG00000015973	RCL1	100	53.600	ENSEBUG00000016621	-	100	53.600	Eptatretus_burgeri
ENSECAG00000015973	RCL1	100	99.464	ENSEASG00005010653	RCL1	100	99.464	Equus_asinus_asinus
ENSECAG00000015973	RCL1	100	82.842	ENSEEUG00000009801	RCL1	98	86.686	Erinaceus_europaeus
ENSECAG00000015973	RCL1	100	76.203	ENSELUG00000007353	rcl1	100	76.203	Esox_lucius
ENSECAG00000015973	RCL1	100	95.442	ENSFCAG00000014557	RCL1	100	95.442	Felis_catus
ENSECAG00000015973	RCL1	95	81.408	ENSFALG00000010553	RCL1	94	81.408	Ficedula_albicollis
ENSECAG00000015973	RCL1	88	95.413	ENSFDAG00000004209	RCL1	100	95.413	Fukomys_damarensis
ENSECAG00000015973	RCL1	99	79.730	ENSFHEG00000011228	rcl1	99	79.730	Fundulus_heteroclitus
ENSECAG00000015973	RCL1	99	77.297	ENSGMOG00000004677	rcl1	99	77.568	Gadus_morhua
ENSECAG00000015973	RCL1	99	85.366	ENSGALG00000015024	RCL1	99	85.366	Gallus_gallus
ENSECAG00000015973	RCL1	99	78.378	ENSGAFG00000007257	rcl1	99	78.378	Gambusia_affinis
ENSECAG00000015973	RCL1	100	77.540	ENSGACG00000017474	rcl1	100	77.540	Gasterosteus_aculeatus
ENSECAG00000015973	RCL1	100	89.544	ENSGAGG00000003689	RCL1	100	89.544	Gopherus_agassizii
ENSECAG00000015973	RCL1	100	97.319	ENSGGOG00000015041	RCL1	100	97.319	Gorilla_gorilla
ENSECAG00000015973	RCL1	99	78.919	ENSHBUG00000001393	rcl1	99	78.919	Haplochromis_burtoni
ENSECAG00000015973	RCL1	100	96.515	ENSHGLG00000016452	RCL1	100	96.515	Heterocephalus_glaber_female
ENSECAG00000015973	RCL1	88	30.094	ENSHGLG00000002617	RTCA	84	30.000	Heterocephalus_glaber_female
ENSECAG00000015973	RCL1	100	80.161	ENSHGLG00000005368	-	100	79.625	Heterocephalus_glaber_female
ENSECAG00000015973	RCL1	100	89.544	ENSHGLG00100008718	-	100	89.544	Heterocephalus_glaber_male
ENSECAG00000015973	RCL1	100	80.965	ENSHGLG00100018010	-	100	80.429	Heterocephalus_glaber_male
ENSECAG00000015973	RCL1	88	30.094	ENSHGLG00100006056	RTCA	84	30.000	Heterocephalus_glaber_male
ENSECAG00000015973	RCL1	99	78.108	ENSHCOG00000020170	rcl1	99	78.108	Hippocampus_comes
ENSECAG00000015973	RCL1	98	80.435	ENSIPUG00000018054	RCL1	99	80.435	Ictalurus_punctatus
ENSECAG00000015973	RCL1	100	96.247	ENSSTOG00000000023	RCL1	100	96.247	Ictidomys_tridecemlineatus
ENSECAG00000015973	RCL1	100	95.174	ENSJJAG00000022803	-	100	95.174	Jaculus_jaculus
ENSECAG00000015973	RCL1	54	71.642	ENSJJAG00000000764	-	95	71.649	Jaculus_jaculus
ENSECAG00000015973	RCL1	100	84.182	ENSJJAG00000015632	-	100	84.182	Jaculus_jaculus
ENSECAG00000015973	RCL1	98	77.657	ENSKMAG00000011946	rcl1	99	77.657	Kryptolebias_marmoratus
ENSECAG00000015973	RCL1	99	75.946	ENSLBEG00000003957	rcl1	99	75.946	Labrus_bergylta
ENSECAG00000015973	RCL1	92	82.675	ENSLACG00000004594	RCL1	98	84.858	Latimeria_chalumnae
ENSECAG00000015973	RCL1	100	82.306	ENSLOCG00000010148	rcl1	98	82.306	Lepisosteus_oculatus
ENSECAG00000015973	RCL1	100	93.298	ENSLAFG00000017495	RCL1	100	93.298	Loxodonta_africana
ENSECAG00000015973	RCL1	100	97.319	ENSMFAG00000037906	RCL1	100	97.319	Macaca_fascicularis
ENSECAG00000015973	RCL1	100	97.319	ENSMNEG00000012288	RCL1	100	97.319	Macaca_nemestrina
ENSECAG00000015973	RCL1	100	97.319	ENSMLEG00000043088	RCL1	100	97.319	Mandrillus_leucophaeus
ENSECAG00000015973	RCL1	99	78.919	ENSMAMG00000008311	rcl1	99	78.919	Mastacembelus_armatus
ENSECAG00000015973	RCL1	99	78.649	ENSMZEG00005017292	rcl1	99	78.649	Maylandia_zebra
ENSECAG00000015973	RCL1	58	83.105	ENSMGAG00000002245	RCL1	97	83.019	Meleagris_gallopavo
ENSECAG00000015973	RCL1	58	95.349	ENSMAUG00000008922	Rcl1	97	95.192	Mesocricetus_auratus
ENSECAG00000015973	RCL1	100	96.515	ENSMICG00000015562	RCL1	100	96.515	Microcebus_murinus
ENSECAG00000015973	RCL1	100	95.979	ENSMOCG00000012145	Rcl1	100	95.979	Microtus_ochrogaster
ENSECAG00000015973	RCL1	99	75.202	ENSMMOG00000021264	rcl1	99	75.202	Mola_mola
ENSECAG00000015973	RCL1	95	94.085	ENSMODG00000015377	RCL1	94	94.085	Monodelphis_domestica
ENSECAG00000015973	RCL1	99	77.297	ENSMALG00000018618	rcl1	99	77.297	Monopterus_albus
ENSECAG00000015973	RCL1	100	96.247	MGP_CAROLIEiJ_G0022853	Rcl1	100	96.247	Mus_caroli
ENSECAG00000015973	RCL1	100	95.710	ENSMUSG00000024785	Rcl1	100	95.710	Mus_musculus
ENSECAG00000015973	RCL1	100	95.710	MGP_PahariEiJ_G0014346	Rcl1	100	95.882	Mus_pahari
ENSECAG00000015973	RCL1	100	95.442	MGP_SPRETEiJ_G0023771	Rcl1	100	95.442	Mus_spretus
ENSECAG00000015973	RCL1	100	96.247	ENSMPUG00000004998	RCL1	100	96.247	Mustela_putorius_furo
ENSECAG00000015973	RCL1	100	96.247	ENSMLUG00000009654	RCL1	100	96.247	Myotis_lucifugus
ENSECAG00000015973	RCL1	100	96.247	ENSNGAG00000015327	Rcl1	100	96.247	Nannospalax_galili
ENSECAG00000015973	RCL1	90	77.745	ENSNBRG00000019854	rcl1	96	74.302	Neolamprologus_brichardi
ENSECAG00000015973	RCL1	100	94.906	ENSNLEG00000008891	RCL1	100	94.906	Nomascus_leucogenys
ENSECAG00000015973	RCL1	100	87.131	ENSMEUG00000007653	RCL1	100	87.131	Notamacropus_eugenii
ENSECAG00000015973	RCL1	100	95.442	ENSOPRG00000010965	RCL1	100	95.442	Ochotona_princeps
ENSECAG00000015973	RCL1	88	78.012	ENSODEG00000004151	RCL1	96	78.963	Octodon_degus
ENSECAG00000015973	RCL1	99	78.649	ENSONIG00000003871	rcl1	99	78.649	Oreochromis_niloticus
ENSECAG00000015973	RCL1	66	89.113	ENSOANG00000013193	-	98	89.113	Ornithorhynchus_anatinus
ENSECAG00000015973	RCL1	100	96.515	ENSOCUG00000008161	RCL1	100	96.515	Oryctolagus_cuniculus
ENSECAG00000015973	RCL1	100	75.936	ENSORLG00000010443	rcl1	100	75.936	Oryzias_latipes
ENSECAG00000015973	RCL1	100	75.936	ENSORLG00020012211	rcl1	100	75.936	Oryzias_latipes_hni
ENSECAG00000015973	RCL1	100	75.668	ENSORLG00015001122	rcl1	100	75.668	Oryzias_latipes_hsok
ENSECAG00000015973	RCL1	100	77.540	ENSOMEG00000022976	rcl1	88	77.540	Oryzias_melastigma
ENSECAG00000015973	RCL1	100	95.710	ENSOGAG00000007480	RCL1	100	95.710	Otolemur_garnettii
ENSECAG00000015973	RCL1	100	96.247	ENSOARG00000013463	RCL1	100	96.247	Ovis_aries
ENSECAG00000015973	RCL1	100	97.587	ENSPPAG00000037958	RCL1	100	97.587	Pan_paniscus
ENSECAG00000015973	RCL1	100	94.638	ENSPPRG00000022645	RCL1	100	94.638	Panthera_pardus
ENSECAG00000015973	RCL1	87	95.399	ENSPTIG00000019031	RCL1	97	93.750	Panthera_tigris_altaica
ENSECAG00000015973	RCL1	100	97.319	ENSPTRG00000020743	RCL1	100	97.319	Pan_troglodytes
ENSECAG00000015973	RCL1	100	97.319	ENSPANG00000025151	RCL1	100	97.319	Papio_anubis
ENSECAG00000015973	RCL1	90	30.094	ENSPKIG00000001653	rtca	85	30.094	Paramormyrops_kingsleyae
ENSECAG00000015973	RCL1	100	78.877	ENSPKIG00000021022	rcl1	100	78.877	Paramormyrops_kingsleyae
ENSECAG00000015973	RCL1	88	90.549	ENSPSIG00000012302	RCL1	100	90.549	Pelodiscus_sinensis
ENSECAG00000015973	RCL1	100	76.471	ENSPMGG00000024007	rcl1	100	76.471	Periophthalmus_magnuspinnatus
ENSECAG00000015973	RCL1	100	96.515	ENSPEMG00000023275	Rcl1	100	96.515	Peromyscus_maniculatus_bairdii
ENSECAG00000015973	RCL1	97	30.685	ENSPMAG00000009110	rtca	96	30.685	Petromyzon_marinus
ENSECAG00000015973	RCL1	100	94.102	ENSPCIG00000000188	RCL1	100	94.102	Phascolarctos_cinereus
ENSECAG00000015973	RCL1	99	79.189	ENSPFOG00000019682	rcl1	99	79.189	Poecilia_formosa
ENSECAG00000015973	RCL1	99	79.189	ENSPLAG00000022354	rcl1	99	79.189	Poecilia_latipinna
ENSECAG00000015973	RCL1	99	79.189	ENSPMEG00000008131	rcl1	99	79.189	Poecilia_mexicana
ENSECAG00000015973	RCL1	99	78.919	ENSPREG00000008032	rcl1	99	78.919	Poecilia_reticulata
ENSECAG00000015973	RCL1	100	97.587	ENSPPYG00000019244	RCL1	100	97.587	Pongo_abelii
ENSECAG00000015973	RCL1	100	85.255	ENSPCAG00000001440	RCL1	100	85.255	Procavia_capensis
ENSECAG00000015973	RCL1	100	97.855	ENSPCOG00000009611	RCL1	100	97.855	Propithecus_coquereli
ENSECAG00000015973	RCL1	100	97.319	ENSPVAG00000015752	RCL1	100	97.319	Pteropus_vampyrus
ENSECAG00000015973	RCL1	99	78.649	ENSPNYG00000012910	rcl1	99	78.649	Pundamilia_nyererei
ENSECAG00000015973	RCL1	99	78.552	ENSPNAG00000028307	rcl1	92	78.552	Pygocentrus_nattereri
ENSECAG00000015973	RCL1	100	95.442	ENSRNOG00000015491	Rcl1	100	95.442	Rattus_norvegicus
ENSECAG00000015973	RCL1	100	97.319	ENSRBIG00000035818	RCL1	100	97.319	Rhinopithecus_bieti
ENSECAG00000015973	RCL1	100	97.319	ENSRROG00000029781	RCL1	100	97.319	Rhinopithecus_roxellana
ENSECAG00000015973	RCL1	98	36.413	YOL010W	-	97	36.413	Saccharomyces_cerevisiae
ENSECAG00000015973	RCL1	100	97.051	ENSSBOG00000026369	RCL1	100	97.051	Saimiri_boliviensis_boliviensis
ENSECAG00000015973	RCL1	88	93.030	ENSSHAG00000014086	RCL1	100	93.030	Sarcophilus_harrisii
ENSECAG00000015973	RCL1	100	78.610	ENSSFOG00015023020	rcl1	100	78.610	Scleropages_formosus
ENSECAG00000015973	RCL1	99	78.108	ENSSMAG00000019751	rcl1	85	78.108	Scophthalmus_maximus
ENSECAG00000015973	RCL1	100	77.273	ENSSDUG00000006349	rcl1	100	77.273	Seriola_dumerili
ENSECAG00000015973	RCL1	100	77.540	ENSSLDG00000022076	rcl1	100	77.540	Seriola_lalandi_dorsalis
ENSECAG00000015973	RCL1	100	95.442	ENSSARG00000009260	RCL1	100	95.442	Sorex_araneus
ENSECAG00000015973	RCL1	100	87.936	ENSSPUG00000016330	RCL1	100	87.936	Sphenodon_punctatus
ENSECAG00000015973	RCL1	100	79.679	ENSSPAG00000018038	rcl1	100	79.679	Stegastes_partitus
ENSECAG00000015973	RCL1	100	97.855	ENSSSCG00000005217	RCL1	83	97.855	Sus_scrofa
ENSECAG00000015973	RCL1	100	83.733	ENSTGUG00000005138	RCL1	100	83.733	Taeniopygia_guttata
ENSECAG00000015973	RCL1	99	78.378	ENSTRUG00000010493	rcl1	99	78.378	Takifugu_rubripes
ENSECAG00000015973	RCL1	99	77.507	ENSTNIG00000013214	rcl1	99	77.507	Tetraodon_nigroviridis
ENSECAG00000015973	RCL1	100	90.349	ENSTBEG00000016339	RCL1	100	90.349	Tupaia_belangeri
ENSECAG00000015973	RCL1	100	96.783	ENSTTRG00000016525	RCL1	100	96.783	Tursiops_truncatus
ENSECAG00000015973	RCL1	100	97.319	ENSUAMG00000005598	RCL1	100	97.319	Ursus_americanus
ENSECAG00000015973	RCL1	88	96.330	ENSUMAG00000017890	RCL1	97	96.330	Ursus_maritimus
ENSECAG00000015973	RCL1	88	98.165	ENSVPAG00000009188	RCL1	100	98.165	Vicugna_pacos
ENSECAG00000015973	RCL1	88	96.646	ENSVVUG00000007304	RCL1	89	96.646	Vulpes_vulpes
ENSECAG00000015973	RCL1	100	74.866	ENSXETG00000000592	rcl1	100	74.866	Xenopus_tropicalis
ENSECAG00000015973	RCL1	62	30.455	ENSXCOG00000008002	rtca	63	30.455	Xiphophorus_couchianus
ENSECAG00000015973	RCL1	99	79.189	ENSXCOG00000004922	rcl1	99	79.189	Xiphophorus_couchianus
ENSECAG00000015973	RCL1	99	79.189	ENSXMAG00000022366	RCL1	99	79.189	Xiphophorus_maculatus