EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000015974 (Gene tree)
Gene ID: -
Gene Symbol: TRIM39-RPP21
Alias: -
Full Name: TRIM39-RPP21 readthrough
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 24197 bases
Position: chr20:30443169-30467365
Accession: 38845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000013807	Rpr2	PF04032.16	2.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000017045	TRIM39-RPP21-201	2756	-	ENSECAP00000013807	580 (aa)	-	F6TXD1

Gene Model

Click here to download ENSECAG00000015974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000015974's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000015974	TRIM39-RPP21	87	99.457	ENSG00000248167	TRIM39-RPP21	100	99.457	Homo_sapiens
ENSECAG00000015974	TRIM39-RPP21	87	99.728	ENSCAFG00020017552	TRIM39-RPP21	100	99.458	Canis_lupus_dingo
ENSECAG00000015974	TRIM39-RPP21	87	99.457	ENSCANG00000028141	TRIM39-RPP21	100	99.457	Colobus_angolensis_palliatus
ENSECAG00000015974	TRIM39-RPP21	87	98.645	ENSMICG00000004749	TRIM39-RPP21	100	98.645	Microcebus_murinus
ENSECAG00000015974	TRIM39-RPP21	72	95.730	ENSMLUG00000015705	TRIM39-RPP21	100	95.730	Myotis_lucifugus
ENSECAG00000015974	TRIM39-RPP21	82	98.103	ENSOCUG00000014141	TRIM39-RPP21	55	98.103	Oryctolagus_cuniculus
ENSECAG00000015974	TRIM39-RPP21	69	91.786	ENSSHAG00000005422	TRIM39-RPP21	99	91.459	Sarcophilus_harrisii
ENSECAG00000015974	TRIM39-RPP21	87	99.728	ENSVVUG00000009510	TRIM39-RPP21	100	99.458	Vulpes_vulpes