EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000016149 (Gene tree)
Gene ID: 100146178
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 6943 bases
Position: chr7:46646003-46652945
Accession: 100146178
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000013901	zf-CCCH	PF00642.24	1.3e-05	1	1
ENSECAP00000013901	TRM	PF02005.16	1.8e-148	1	1
ENSECAP00000013901	Met_10	PF02475.16	3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000017149	TRMT1-201	1959	XM_023645274	ENSECAP00000013901	637 (aa)	XP_023501042	F6W9F2

Gene Model

Click here to download ENSECAG00000016149's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000016149's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000016149	TRMT1	97	88.889	ENSG00000104907	TRMT1	100	92.670	Homo_sapiens
ENSECAG00000016149	TRMT1	100	88.226	ENSAMEG00000012598	TRMT1	93	88.462	Ailuropoda_melanoleuca
ENSECAG00000016149	TRMT1	94	57.049	ENSACIG00000018680	trmt1	94	57.049	Amphilophus_citrinellus
ENSECAG00000016149	TRMT1	90	65.972	ENSAOCG00000006781	trmt1	86	65.972	Amphiprion_ocellaris
ENSECAG00000016149	TRMT1	90	65.972	ENSAPEG00000007712	trmt1	86	65.972	Amphiprion_percula
ENSECAG00000016149	TRMT1	90	67.776	ENSATEG00000001872	trmt1	84	67.776	Anabas_testudineus
ENSECAG00000016149	TRMT1	91	67.347	ENSACAG00000003825	TRMT1	94	67.347	Anolis_carolinensis
ENSECAG00000016149	TRMT1	99	83.835	ENSANAG00000023016	TRMT1	98	85.948	Aotus_nancymaae
ENSECAG00000016149	TRMT1	90	64.572	ENSACLG00000010073	trmt1	92	64.398	Astatotilapia_calliptera
ENSECAG00000016149	TRMT1	90	67.188	ENSAMXG00000012026	trmt1	85	67.188	Astyanax_mexicanus
ENSECAG00000016149	TRMT1	100	87.284	ENSBTAG00000019325	TRMT1	89	87.821	Bos_taurus
ENSECAG00000016149	TRMT1	83	39.963	WBGene00006613	trm-1	96	39.665	Caenorhabditis_elegans
ENSECAG00000016149	TRMT1	99	82.437	ENSCJAG00000004566	TRMT1	96	82.616	Callithrix_jacchus
ENSECAG00000016149	TRMT1	100	89.482	ENSCAFG00000017070	TRMT1	98	89.583	Canis_familiaris
ENSECAG00000016149	TRMT1	99	88.217	ENSCAFG00020005397	TRMT1	94	87.685	Canis_lupus_dingo
ENSECAG00000016149	TRMT1	100	86.991	ENSCHIG00000013569	TRMT1	94	87.520	Capra_hircus
ENSECAG00000016149	TRMT1	98	82.748	ENSTSYG00000003207	TRMT1	95	82.748	Carlito_syrichta
ENSECAG00000016149	TRMT1	88	78.826	ENSCAPG00000003355	TRMT1	97	79.174	Cavia_aperea
ENSECAG00000016149	TRMT1	98	82.428	ENSCPOG00000011754	TRMT1	94	82.770	Cavia_porcellus
ENSECAG00000016149	TRMT1	99	82.035	ENSCCAG00000022263	TRMT1	98	84.124	Cebus_capucinus
ENSECAG00000016149	TRMT1	87	73.150	ENSCATG00000038220	-	95	73.150	Cercocebus_atys
ENSECAG00000016149	TRMT1	100	87.912	ENSCATG00000039850	TRMT1	94	88.301	Cercocebus_atys
ENSECAG00000016149	TRMT1	98	85.897	ENSCLAG00000015295	TRMT1	97	82.400	Chinchilla_lanigera
ENSECAG00000016149	TRMT1	79	89.505	ENSCSAG00000006500	TRMT1	95	89.505	Chlorocebus_sabaeus
ENSECAG00000016149	TRMT1	93	68.289	ENSCPBG00000023866	TRMT1	87	69.128	Chrysemys_picta_bellii
ENSECAG00000016149	TRMT1	87	46.441	ENSCING00000002884	-	98	46.441	Ciona_intestinalis
ENSECAG00000016149	TRMT1	86	46.751	ENSCSAVG00000010927	-	100	46.950	Ciona_savignyi
ENSECAG00000016149	TRMT1	100	72.300	ENSCANG00000040631	TRMT1	95	72.364	Colobus_angolensis_palliatus
ENSECAG00000016149	TRMT1	95	67.763	ENSCANG00000031650	-	94	67.763	Colobus_angolensis_palliatus
ENSECAG00000016149	TRMT1	99	82.233	ENSCGRG00001022594	Trmt1	94	83.577	Cricetulus_griseus_chok1gshd
ENSECAG00000016149	TRMT1	99	82.233	ENSCGRG00000017732	Trmt1	92	83.577	Cricetulus_griseus_crigri
ENSECAG00000016149	TRMT1	90	65.969	ENSCSEG00000001643	trmt1	84	68.031	Cynoglossus_semilaevis
ENSECAG00000016149	TRMT1	90	67.250	ENSCVAG00000011886	trmt1	85	67.250	Cyprinodon_variegatus
ENSECAG00000016149	TRMT1	90	65.921	ENSDARG00000010978	trmt1	85	65.921	Danio_rerio
ENSECAG00000016149	TRMT1	87	61.786	ENSDNOG00000048240	-	92	62.247	Dasypus_novemcinctus
ENSECAG00000016149	TRMT1	100	82.132	ENSDORG00000014298	Trmt1	95	82.560	Dipodomys_ordii
ENSECAG00000016149	TRMT1	85	45.833	FBgn0032430	CG6388	93	45.833	Drosophila_melanogaster
ENSECAG00000016149	TRMT1	54	84.701	ENSETEG00000015483	-	50	84.701	Echinops_telfairi
ENSECAG00000016149	TRMT1	81	53.191	ENSEBUG00000003449	trmt1	76	53.053	Eptatretus_burgeri
ENSECAG00000016149	TRMT1	100	99.686	ENSEASG00005004050	TRMT1	100	99.686	Equus_asinus_asinus
ENSECAG00000016149	TRMT1	62	70.781	ENSEEUG00000014102	-	100	70.781	Erinaceus_europaeus
ENSECAG00000016149	TRMT1	94	61.851	ENSELUG00000021659	trmt1	91	61.851	Esox_lucius
ENSECAG00000016149	TRMT1	100	88.697	ENSFCAG00000000483	TRMT1	95	88.782	Felis_catus
ENSECAG00000016149	TRMT1	99	83.203	ENSFDAG00000007386	TRMT1	94	83.949	Fukomys_damarensis
ENSECAG00000016149	TRMT1	91	64.605	ENSFHEG00000012865	trmt1	89	67.724	Fundulus_heteroclitus
ENSECAG00000016149	TRMT1	90	59.686	ENSGMOG00000006564	trmt1	98	59.860	Gadus_morhua
ENSECAG00000016149	TRMT1	95	64.860	ENSGAFG00000011862	trmt1	94	65.246	Gambusia_affinis
ENSECAG00000016149	TRMT1	91	62.628	ENSGACG00000000227	trmt1	94	62.628	Gasterosteus_aculeatus
ENSECAG00000016149	TRMT1	96	67.590	ENSGAGG00000016432	TRMT1	89	67.590	Gopherus_agassizii
ENSECAG00000016149	TRMT1	97	89.211	ENSGGOG00000014007	TRMT1	94	89.211	Gorilla_gorilla
ENSECAG00000016149	TRMT1	91	57.414	ENSHBUG00000008821	trmt1	95	57.414	Haplochromis_burtoni
ENSECAG00000016149	TRMT1	99	83.570	ENSHGLG00000015972	TRMT1	95	83.974	Heterocephalus_glaber_female
ENSECAG00000016149	TRMT1	99	77.760	ENSHGLG00100018112	TRMT1	95	78.080	Heterocephalus_glaber_male
ENSECAG00000016149	TRMT1	90	63.923	ENSHCOG00000009447	trmt1	88	63.923	Hippocampus_comes
ENSECAG00000016149	TRMT1	90	66.438	ENSIPUG00000002899	trmt1	85	66.438	Ictalurus_punctatus
ENSECAG00000016149	TRMT1	100	85.423	ENSSTOG00000012531	TRMT1	95	86.151	Ictidomys_tridecemlineatus
ENSECAG00000016149	TRMT1	93	84.343	ENSJJAG00000017154	Trmt1	94	82.305	Jaculus_jaculus
ENSECAG00000016149	TRMT1	90	67.250	ENSKMAG00000011809	trmt1	95	65.849	Kryptolebias_marmoratus
ENSECAG00000016149	TRMT1	90	65.849	ENSLBEG00000012703	trmt1	84	65.849	Labrus_bergylta
ENSECAG00000016149	TRMT1	90	58.651	ENSLACG00000014585	TRMT1	96	57.815	Latimeria_chalumnae
ENSECAG00000016149	TRMT1	90	62.027	ENSLOCG00000006479	trmt1	97	62.027	Lepisosteus_oculatus
ENSECAG00000016149	TRMT1	98	85.965	ENSLAFG00000014072	TRMT1	96	86.356	Loxodonta_africana
ENSECAG00000016149	TRMT1	100	88.069	ENSMFAG00000033143	TRMT1	94	88.462	Macaca_fascicularis
ENSECAG00000016149	TRMT1	100	81.534	ENSMMUG00000001167	TRMT1	95	81.789	Macaca_mulatta
ENSECAG00000016149	TRMT1	100	87.912	ENSMNEG00000037867	TRMT1	94	88.301	Macaca_nemestrina
ENSECAG00000016149	TRMT1	100	87.441	ENSMLEG00000016142	TRMT1	95	87.821	Mandrillus_leucophaeus
ENSECAG00000016149	TRMT1	90	67.308	ENSMAMG00000004357	trmt1	85	67.308	Mastacembelus_armatus
ENSECAG00000016149	TRMT1	90	64.921	ENSMZEG00005014510	trmt1	91	62.397	Maylandia_zebra
ENSECAG00000016149	TRMT1	98	82.400	ENSMAUG00000011134	Trmt1	93	82.742	Mesocricetus_auratus
ENSECAG00000016149	TRMT1	99	88.050	ENSMICG00000000793	TRMT1	94	88.122	Microcebus_murinus
ENSECAG00000016149	TRMT1	97	82.770	ENSMOCG00000015895	Trmt1	93	83.415	Microtus_ochrogaster
ENSECAG00000016149	TRMT1	90	66.200	ENSMMOG00000011097	trmt1	92	66.200	Mola_mola
ENSECAG00000016149	TRMT1	96	75.772	ENSMODG00000011619	TRMT1	99	75.772	Monodelphis_domestica
ENSECAG00000016149	TRMT1	100	81.591	MGP_CAROLIEiJ_G0031304	Trmt1	100	81.749	Mus_caroli
ENSECAG00000016149	TRMT1	100	81.279	ENSMUSG00000001909	Trmt1	100	80.989	Mus_musculus
ENSECAG00000016149	TRMT1	100	81.123	MGP_SPRETEiJ_G0032422	Trmt1	100	80.989	Mus_spretus
ENSECAG00000016149	TRMT1	100	87.598	ENSMPUG00000004210	TRMT1	89	87.660	Mustela_putorius_furo
ENSECAG00000016149	TRMT1	100	89.011	ENSMLUG00000012809	TRMT1	93	89.406	Myotis_lucifugus
ENSECAG00000016149	TRMT1	99	81.191	ENSNGAG00000022486	Trmt1	94	81.600	Nannospalax_galili
ENSECAG00000016149	TRMT1	78	68.546	ENSNBRG00000024376	trmt1	85	68.546	Neolamprologus_brichardi
ENSECAG00000016149	TRMT1	78	88.365	ENSNLEG00000013019	-	93	88.365	Nomascus_leucogenys
ENSECAG00000016149	TRMT1	94	75.251	ENSMEUG00000013756	TRMT1	100	75.251	Notamacropus_eugenii
ENSECAG00000016149	TRMT1	82	84.270	ENSOPRG00000009471	-	76	86.761	Ochotona_princeps
ENSECAG00000016149	TRMT1	98	84.211	ENSODEG00000010323	TRMT1	94	84.677	Octodon_degus
ENSECAG00000016149	TRMT1	94	65.829	ENSONIG00000000400	trmt1	95	65.829	Oreochromis_niloticus
ENSECAG00000016149	TRMT1	79	87.723	ENSOCUG00000021934	TRMT1	95	87.723	Oryctolagus_cuniculus
ENSECAG00000016149	TRMT1	90	60.616	ENSORLG00000020074	trmt1	90	60.616	Oryzias_latipes
ENSECAG00000016149	TRMT1	90	64.286	ENSORLG00020007561	trmt1	90	64.111	Oryzias_latipes_hni
ENSECAG00000016149	TRMT1	90	64.634	ENSORLG00015006547	trmt1	86	64.634	Oryzias_latipes_hsok
ENSECAG00000016149	TRMT1	95	63.279	ENSOMEG00000019343	trmt1	92	62.951	Oryzias_melastigma
ENSECAG00000016149	TRMT1	97	85.437	ENSOGAG00000025576	TRMT1	97	85.437	Otolemur_garnettii
ENSECAG00000016149	TRMT1	100	71.919	ENSOARG00000009397	TRMT1	88	72.293	Ovis_aries
ENSECAG00000016149	TRMT1	100	80.377	ENSPPRG00000012117	TRMT1	96	80.449	Panthera_pardus
ENSECAG00000016149	TRMT1	78	91.456	ENSPTIG00000008833	TRMT1	92	91.456	Panthera_tigris_altaica
ENSECAG00000016149	TRMT1	97	89.050	ENSPTRG00000010557	TRMT1	94	89.050	Pan_troglodytes
ENSECAG00000016149	TRMT1	99	66.667	ENSPTRG00000050421	-	94	66.396	Pan_troglodytes
ENSECAG00000016149	TRMT1	88	73.278	ENSPANG00000034058	-	94	73.278	Papio_anubis
ENSECAG00000016149	TRMT1	100	88.069	ENSPANG00000009247	TRMT1	94	88.462	Papio_anubis
ENSECAG00000016149	TRMT1	90	68.293	ENSPKIG00000005309	trmt1	84	68.293	Paramormyrops_kingsleyae
ENSECAG00000016149	TRMT1	91	58.662	ENSPSIG00000008762	TRMT1	83	58.662	Pelodiscus_sinensis
ENSECAG00000016149	TRMT1	90	65.849	ENSPMGG00000019764	trmt1	90	65.849	Periophthalmus_magnuspinnatus
ENSECAG00000016149	TRMT1	97	83.871	ENSPEMG00000016247	Trmt1	93	83.871	Peromyscus_maniculatus_bairdii
ENSECAG00000016149	TRMT1	92	57.976	ENSPMAG00000004329	trmt1	91	57.976	Petromyzon_marinus
ENSECAG00000016149	TRMT1	96	75.246	ENSPCIG00000019273	TRMT1	96	74.396	Phascolarctos_cinereus
ENSECAG00000016149	TRMT1	91	67.802	ENSPFOG00000008527	trmt1	90	67.802	Poecilia_formosa
ENSECAG00000016149	TRMT1	91	67.632	ENSPLAG00000018788	trmt1	89	69.811	Poecilia_latipinna
ENSECAG00000016149	TRMT1	94	66.116	ENSPMEG00000013120	trmt1	93	66.118	Poecilia_mexicana
ENSECAG00000016149	TRMT1	90	67.304	ENSPREG00000000211	trmt1	85	67.708	Poecilia_reticulata
ENSECAG00000016149	TRMT1	97	88.889	ENSPPYG00000009622	TRMT1	94	88.889	Pongo_abelii
ENSECAG00000016149	TRMT1	99	78.378	ENSPCAG00000003698	TRMT1	96	78.526	Procavia_capensis
ENSECAG00000016149	TRMT1	99	87.736	ENSPCOG00000008653	TRMT1	95	88.122	Propithecus_coquereli
ENSECAG00000016149	TRMT1	100	88.697	ENSPVAG00000015076	TRMT1	95	88.782	Pteropus_vampyrus
ENSECAG00000016149	TRMT1	90	63.525	ENSPNYG00000013960	trmt1	92	63.525	Pundamilia_nyererei
ENSECAG00000016149	TRMT1	84	68.476	ENSPNAG00000024859	trmt1	88	68.476	Pygocentrus_nattereri
ENSECAG00000016149	TRMT1	100	81.279	ENSRNOG00000002914	Trmt1	97	82.742	Rattus_norvegicus
ENSECAG00000016149	TRMT1	100	87.755	ENSRBIG00000038324	TRMT1	94	88.141	Rhinopithecus_bieti
ENSECAG00000016149	TRMT1	95	68.852	ENSRBIG00000037505	-	95	68.852	Rhinopithecus_bieti
ENSECAG00000016149	TRMT1	95	68.197	ENSRROG00000031847	-	94	68.197	Rhinopithecus_roxellana
ENSECAG00000016149	TRMT1	100	87.598	ENSRROG00000028599	TRMT1	94	87.981	Rhinopithecus_roxellana
ENSECAG00000016149	TRMT1	80	36.989	YDR120C	-	92	37.175	Saccharomyces_cerevisiae
ENSECAG00000016149	TRMT1	100	81.476	ENSSBOG00000028861	TRMT1	98	83.961	Saimiri_boliviensis_boliviensis
ENSECAG00000016149	TRMT1	90	78.856	ENSSHAG00000014381	TRMT1	99	75.649	Sarcophilus_harrisii
ENSECAG00000016149	TRMT1	91	66.724	ENSSFOG00015004139	trmt1	85	66.724	Scleropages_formosus
ENSECAG00000016149	TRMT1	90	67.247	ENSSMAG00000021136	trmt1	85	67.247	Scophthalmus_maximus
ENSECAG00000016149	TRMT1	91	65.641	ENSSDUG00000012740	trmt1	89	64.463	Seriola_dumerili
ENSECAG00000016149	TRMT1	91	65.641	ENSSLDG00000005971	trmt1	89	64.463	Seriola_lalandi_dorsalis
ENSECAG00000016149	TRMT1	85	84.982	ENSSARG00000005138	TRMT1	96	84.982	Sorex_araneus
ENSECAG00000016149	TRMT1	91	55.119	ENSSPUG00000001084	TRMT1	91	55.290	Sphenodon_punctatus
ENSECAG00000016149	TRMT1	92	63.328	ENSSPAG00000007153	trmt1	97	63.328	Stegastes_partitus
ENSECAG00000016149	TRMT1	100	89.498	ENSSSCG00000013744	TRMT1	98	89.920	Sus_scrofa
ENSECAG00000016149	TRMT1	89	61.872	ENSTRUG00000010700	trmt1	86	62.045	Takifugu_rubripes
ENSECAG00000016149	TRMT1	90	65.445	ENSTNIG00000018808	trmt1	98	65.445	Tetraodon_nigroviridis
ENSECAG00000016149	TRMT1	100	85.871	ENSTTRG00000006379	TRMT1	95	85.897	Tursiops_truncatus
ENSECAG00000016149	TRMT1	100	88.383	ENSUAMG00000022911	TRMT1	96	88.462	Ursus_americanus
ENSECAG00000016149	TRMT1	100	87.912	ENSUMAG00000006027	TRMT1	98	87.981	Ursus_maritimus
ENSECAG00000016149	TRMT1	100	89.011	ENSVVUG00000024177	TRMT1	94	89.103	Vulpes_vulpes
ENSECAG00000016149	TRMT1	72	71.584	ENSXETG00000033863	TRMT1	92	71.584	Xenopus_tropicalis
ENSECAG00000016149	TRMT1	90	67.652	ENSXCOG00000015733	trmt1	88	68.056	Xiphophorus_couchianus
ENSECAG00000016149	TRMT1	90	67.244	ENSXMAG00000013823	trmt1	98	67.530	Xiphophorus_maculatus