EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000016551 (Gene tree)
Gene ID: 100062377
Gene Symbol: RAB13
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 3809 bases
Position: chr5:40235260-40239068
Accession: 22088
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000014330	MMR_HSR1	PF01926.23	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000017627	-	612	-	ENSECAP00000014330	203 (aa)	XP_003365067	F6YLP8
ENSECAT00000034309	-	822	-	ENSECAP00000028198	273 (aa)	-	-

Gene Model

Click here to download ENSECAG00000016551's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000016551's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000016551	RAB13	82	30.058	ENSECAG00000004611	ARL11	91	30.058
ENSECAG00000016551	RAB13	95	37.500	ENSECAG00000023306	RAB5B	89	37.500
ENSECAG00000016551	RAB13	84	53.529	ENSECAG00000002522	RAB15	91	56.522
ENSECAG00000016551	RAB13	91	55.135	ENSECAG00000009926	RAB1A	90	55.135
ENSECAG00000016551	RAB13	89	45.856	ENSECAG00000022769	RAB30	87	49.383
ENSECAG00000016551	RAB13	79	38.272	ENSECAG00000030195	-	85	38.272
ENSECAG00000016551	RAB13	79	39.506	ENSECAG00000019522	KRAS	85	39.506
ENSECAG00000016551	RAB13	63	31.206	ENSECAG00000019636	ARFRP1	68	31.206
ENSECAG00000016551	RAB13	81	47.273	ENSECAG00000023865	RAB11A	76	44.186
ENSECAG00000016551	RAB13	87	42.781	ENSECAG00000016448	RAB33A	79	42.781
ENSECAG00000016551	RAB13	65	30.075	ENSECAG00000005229	ARF4	71	30.075
ENSECAG00000016551	RAB13	96	35.149	ENSECAG00000011912	RAB36	75	35.149
ENSECAG00000016551	RAB13	91	39.572	ENSECAG00000011518	RAB14	77	44.242
ENSECAG00000016551	RAB13	84	51.744	ENSECAG00000007384	RAB12	50	51.744
ENSECAG00000016551	RAB13	86	46.629	ENSECAG00000007380	RAB39B	84	46.629
ENSECAG00000016551	RAB13	80	40.476	ENSECAG00000022069	RAB9B	83	40.476
ENSECAG00000016551	RAB13	86	56.000	ENSECAG00000008028	KLC2	87	56.000
ENSECAG00000016551	RAB13	85	37.500	ENSECAG00000012559	RAB7A	81	38.323
ENSECAG00000016551	RAB13	78	30.380	ENSECAG00000026942	-	69	30.380
ENSECAG00000016551	RAB13	86	44.318	ENSECAG00000017521	RAB18	75	44.068
ENSECAG00000016551	RAB13	79	37.423	ENSECAG00000018736	MRAS	78	37.423
ENSECAG00000016551	RAB13	91	30.108	ENSECAG00000010046	RHEB	94	31.461
ENSECAG00000016551	RAB13	83	30.114	ENSECAG00000024595	DNAJC27	64	30.114
ENSECAG00000016551	RAB13	81	38.788	ENSECAG00000013427	RAB23	69	38.788
ENSECAG00000016551	RAB13	83	48.214	ENSECAG00000006219	RAB2B	78	48.214
ENSECAG00000016551	RAB13	95	39.583	ENSECAG00000019062	RAB5A	89	39.583
ENSECAG00000016551	RAB13	85	42.077	ENSECAG00000010394	RAB27A	64	42.077
ENSECAG00000016551	RAB13	58	31.405	ENSECAG00000007772	ARL14	60	31.405
ENSECAG00000016551	RAB13	83	47.929	ENSECAG00000012124	RAB2A	80	47.929
ENSECAG00000016551	RAB13	99	33.333	ENSECAG00000014358	RERG	99	33.333
ENSECAG00000016551	RAB13	95	37.500	ENSECAG00000025054	RAB5C	89	37.500
ENSECAG00000016551	RAB13	78	43.671	ENSECAG00000022694	-	76	43.671
ENSECAG00000016551	RAB13	79	39.506	ENSECAG00000008473	HRAS	85	39.506
ENSECAG00000016551	RAB13	79	38.272	ENSECAG00000013942	NRAS	85	38.272
ENSECAG00000016551	RAB13	80	46.012	ENSECAG00000000716	RAB11B	75	46.012
ENSECAG00000016551	RAB13	88	38.947	ENSECAG00000007212	RAB34	73	38.947
ENSECAG00000016551	RAB13	83	41.379	ENSECAG00000019611	RAB33B	76	41.379
ENSECAG00000016551	RAB13	91	41.081	ENSECAG00000023191	RAB25	86	41.081

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000016551	RAB13	100	98.522	ENSG00000143545	RAB13	100	98.522	Homo_sapiens
ENSECAG00000016551	RAB13	99	75.622	ENSACIG00000008584	rab13	97	75.622	Amphilophus_citrinellus
ENSECAG00000016551	RAB13	100	97.044	ENSANAG00000030247	-	100	97.044	Aotus_nancymaae
ENSECAG00000016551	RAB13	99	78.713	ENSAMXG00000030712	rab13	99	78.713	Astyanax_mexicanus
ENSECAG00000016551	RAB13	100	97.044	ENSBTAG00000017604	RAB13	100	97.044	Bos_taurus
ENSECAG00000016551	RAB13	88	44.505	WBGene00019317	K02E10.1	83	44.505	Caenorhabditis_elegans
ENSECAG00000016551	RAB13	100	97.537	ENSCJAG00000009933	-	100	97.537	Callithrix_jacchus
ENSECAG00000016551	RAB13	100	96.552	ENSCHIG00000022271	-	100	96.552	Capra_hircus
ENSECAG00000016551	RAB13	99	91.584	ENSCPOG00000011491	-	99	91.584	Cavia_porcellus
ENSECAG00000016551	RAB13	100	98.030	ENSCCAG00000028502	-	100	98.030	Cebus_capucinus
ENSECAG00000016551	RAB13	100	98.522	ENSCATG00000041779	-	100	98.522	Cercocebus_atys
ENSECAG00000016551	RAB13	100	90.640	ENSCLAG00000006603	-	100	90.640	Chinchilla_lanigera
ENSECAG00000016551	RAB13	100	98.522	ENSCANG00000036573	-	100	98.522	Colobus_angolensis_palliatus
ENSECAG00000016551	RAB13	100	94.581	ENSCGRG00001021505	Rab13	100	94.581	Cricetulus_griseus_chok1gshd
ENSECAG00000016551	RAB13	100	94.581	ENSCGRG00000012126	Rab13	100	94.581	Cricetulus_griseus_crigri
ENSECAG00000016551	RAB13	99	76.238	ENSCSEG00000002358	rab13	99	76.238	Cynoglossus_semilaevis
ENSECAG00000016551	RAB13	99	78.713	ENSDARG00000034771	rab13	99	78.713	Danio_rerio
ENSECAG00000016551	RAB13	100	94.089	ENSDORG00000001591	Rab13	100	94.089	Dipodomys_ordii
ENSECAG00000016551	RAB13	100	100.000	ENSEASG00005000683	-	100	100.000	Equus_asinus_asinus
ENSECAG00000016551	RAB13	99	90.594	ENSEEUG00000001233	-	99	90.594	Erinaceus_europaeus
ENSECAG00000016551	RAB13	99	76.733	ENSELUG00000012801	rab13	99	76.733	Esox_lucius
ENSECAG00000016551	RAB13	100	91.626	ENSFCAG00000045269	-	100	91.626	Felis_catus
ENSECAG00000016551	RAB13	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSECAG00000016551	RAB13	99	75.743	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSECAG00000016551	RAB13	96	78.351	ENSGACG00000011925	rab13	96	78.351	Gasterosteus_aculeatus
ENSECAG00000016551	RAB13	85	90.751	ENSGAGG00000000742	-	99	81.683	Gopherus_agassizii
ENSECAG00000016551	RAB13	100	98.522	ENSGGOG00000023693	RAB13	100	98.522	Gorilla_gorilla
ENSECAG00000016551	RAB13	100	89.655	ENSHGLG00000008749	RAB13	100	89.655	Heterocephalus_glaber_female
ENSECAG00000016551	RAB13	100	89.655	ENSHGLG00100013608	RAB13	100	89.655	Heterocephalus_glaber_male
ENSECAG00000016551	RAB13	99	73.267	ENSHCOG00000007440	rab13	97	84.659	Hippocampus_comes
ENSECAG00000016551	RAB13	99	76.500	ENSIPUG00000003199	rab13	99	76.500	Ictalurus_punctatus
ENSECAG00000016551	RAB13	100	96.059	ENSSTOG00000011222	-	100	96.059	Ictidomys_tridecemlineatus
ENSECAG00000016551	RAB13	100	93.103	ENSJJAG00000010575	Rab13	100	93.103	Jaculus_jaculus
ENSECAG00000016551	RAB13	99	75.000	ENSKMAG00000001908	rab13	97	77.419	Kryptolebias_marmoratus
ENSECAG00000016551	RAB13	99	77.000	ENSLBEG00000026779	rab13	99	77.000	Labrus_bergylta
ENSECAG00000016551	RAB13	85	77.907	ENSLACG00000008103	-	97	77.907	Latimeria_chalumnae
ENSECAG00000016551	RAB13	100	98.522	ENSMFAG00000041018	RAB13	100	98.522	Macaca_fascicularis
ENSECAG00000016551	RAB13	100	98.522	ENSMNEG00000028951	-	100	98.522	Macaca_nemestrina
ENSECAG00000016551	RAB13	100	98.522	ENSMLEG00000042247	-	100	98.522	Mandrillus_leucophaeus
ENSECAG00000016551	RAB13	99	74.752	ENSMAMG00000014602	rab13	99	74.752	Mastacembelus_armatus
ENSECAG00000016551	RAB13	100	94.581	ENSMAUG00000015713	Rab13	100	94.581	Mesocricetus_auratus
ENSECAG00000016551	RAB13	100	96.552	ENSMICG00000010340	-	100	96.552	Microcebus_murinus
ENSECAG00000016551	RAB13	100	94.581	ENSMOCG00000021448	Rab13	100	94.581	Microtus_ochrogaster
ENSECAG00000016551	RAB13	99	92.574	ENSMODG00000017295	-	84	92.574	Monodelphis_domestica
ENSECAG00000016551	RAB13	100	91.626	MGP_CAROLIEiJ_G0025227	Rab13	100	91.626	Mus_caroli
ENSECAG00000016551	RAB13	100	90.640	ENSMUSG00000027935	Rab13	100	90.640	Mus_musculus
ENSECAG00000016551	RAB13	99	91.089	MGP_PahariEiJ_G0026671	Rab13	99	91.089	Mus_pahari
ENSECAG00000016551	RAB13	100	94.581	ENSNGAG00000010309	Rab13	100	94.581	Nannospalax_galili
ENSECAG00000016551	RAB13	99	75.248	ENSNBRG00000004124	rab13	99	75.248	Neolamprologus_brichardi
ENSECAG00000016551	RAB13	100	98.522	ENSNLEG00000028944	-	100	98.522	Nomascus_leucogenys
ENSECAG00000016551	RAB13	100	92.647	ENSMEUG00000009667	-	100	92.647	Notamacropus_eugenii
ENSECAG00000016551	RAB13	100	89.163	ENSODEG00000010443	-	100	89.163	Octodon_degus
ENSECAG00000016551	RAB13	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSECAG00000016551	RAB13	99	76.238	ENSONIG00000006340	rab13	99	76.238	Oreochromis_niloticus
ENSECAG00000016551	RAB13	88	95.506	ENSOCUG00000006286	-	100	95.506	Oryctolagus_cuniculus
ENSECAG00000016551	RAB13	99	76.238	ENSOMEG00000008210	rab13	99	76.238	Oryzias_melastigma
ENSECAG00000016551	RAB13	99	94.059	ENSOGAG00000016969	-	99	94.059	Otolemur_garnettii
ENSECAG00000016551	RAB13	100	98.522	ENSPPAG00000028435	-	100	98.522	Pan_paniscus
ENSECAG00000016551	RAB13	100	91.626	ENSPPRG00000008865	-	100	91.626	Panthera_pardus
ENSECAG00000016551	RAB13	100	98.522	ENSPTRG00000001370	RAB13	100	98.522	Pan_troglodytes
ENSECAG00000016551	RAB13	100	98.522	ENSPANG00000004479	-	100	98.522	Papio_anubis
ENSECAG00000016551	RAB13	99	76.238	ENSPMGG00000007680	rab13	99	76.238	Periophthalmus_magnuspinnatus
ENSECAG00000016551	RAB13	53	97.222	ENSPEMG00000017353	-	81	97.222	Peromyscus_maniculatus_bairdii
ENSECAG00000016551	RAB13	100	93.137	ENSPCIG00000029350	-	100	93.137	Phascolarctos_cinereus
ENSECAG00000016551	RAB13	85	83.815	ENSPLAG00000005832	RAB13	93	83.815	Poecilia_latipinna
ENSECAG00000016551	RAB13	90	80.328	ENSPREG00000017567	rab13	99	74.257	Poecilia_reticulata
ENSECAG00000016551	RAB13	100	98.522	ENSPPYG00000000790	-	100	98.522	Pongo_abelii
ENSECAG00000016551	RAB13	100	97.537	ENSPCOG00000012189	-	100	97.537	Propithecus_coquereli
ENSECAG00000016551	RAB13	100	94.581	ENSPVAG00000011095	-	100	94.581	Pteropus_vampyrus
ENSECAG00000016551	RAB13	87	84.659	ENSPNAG00000004189	rab13	93	84.659	Pygocentrus_nattereri
ENSECAG00000016551	RAB13	100	92.118	ENSRNOG00000016733	Rab13	100	92.118	Rattus_norvegicus
ENSECAG00000016551	RAB13	100	98.030	ENSRBIG00000008552	-	100	98.030	Rhinopithecus_bieti
ENSECAG00000016551	RAB13	100	98.030	ENSRROG00000036885	-	100	98.030	Rhinopithecus_roxellana
ENSECAG00000016551	RAB13	100	97.537	ENSSBOG00000020342	-	100	97.537	Saimiri_boliviensis_boliviensis
ENSECAG00000016551	RAB13	100	92.647	ENSSHAG00000011866	-	100	92.647	Sarcophilus_harrisii
ENSECAG00000016551	RAB13	100	98.030	ENSSSCG00000006564	-	100	98.030	Sus_scrofa
ENSECAG00000016551	RAB13	99	76.733	ENSTRUG00000024177	rab13	99	76.733	Takifugu_rubripes
ENSECAG00000016551	RAB13	100	96.059	ENSTBEG00000012734	-	100	96.059	Tupaia_belangeri
ENSECAG00000016551	RAB13	100	99.015	ENSTTRG00000011183	-	100	99.015	Tursiops_truncatus
ENSECAG00000016551	RAB13	71	81.944	ENSXETG00000020729	rab13	99	78.882	Xenopus_tropicalis
ENSECAG00000016551	RAB13	85	82.659	ENSXCOG00000019533	rab13	93	82.659	Xiphophorus_couchianus