EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000017002 (Gene tree)
Gene ID: -
Gene Symbol: LARP1
Alias: -
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 52630 bases
Position: chr14:23073796-23126425
Accession: 19586
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000014831	La	PF05383.17	1.9e-20	1	1
ENSECAP00000031252	La	PF05383.17	1.9e-20	1	1
ENSECAP00000024201	La	PF05383.17	2e-20	1	1
ENSECAP00000026311	La	PF05383.17	2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000018194	-	4957	-	ENSECAP00000014831	1318 (aa)	-	F6WP12
ENSECAT00000039391	-	7660	XM_023617350	ENSECAP00000026311	1387 (aa)	XP_023473118	-
ENSECAT00000062638	-	4289	-	ENSECAP00000031252	1318 (aa)	-	-
ENSECAT00000058526	-	4098	-	ENSECAP00000024201	1365 (aa)	-	-

Gene Model

Click here to download ENSECAG00000017002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000017002's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000017002	LARP1	71	57.384	ENSECAG00000001088	LARP1B	87	58.583

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000017002	LARP1	70	95.760	ENSG00000155506	LARP1	100	96.466	Homo_sapiens
ENSECAG00000017002	LARP1	70	89.385	ENSAPOG00000020685	larp1	94	89.385	Acanthochromis_polyacanthus
ENSECAG00000017002	LARP1	69	97.806	ENSAMEG00000016673	LARP1	100	97.806	Ailuropoda_melanoleuca
ENSECAG00000017002	LARP1	78	63.019	ENSACIG00000012994	larp1	99	62.382	Amphilophus_citrinellus
ENSECAG00000017002	LARP1	55	75.370	ENSAOCG00000007792	larp1	92	74.457	Amphiprion_ocellaris
ENSECAG00000017002	LARP1	78	64.929	ENSAPEG00000022246	larp1	97	64.299	Amphiprion_percula
ENSECAG00000017002	LARP1	78	63.143	ENSATEG00000013523	larp1	96	62.500	Anabas_testudineus
ENSECAG00000017002	LARP1	67	84.193	ENSAPLG00000007559	LARP1	99	84.417	Anas_platyrhynchos
ENSECAG00000017002	LARP1	67	83.596	ENSACAG00000004071	LARP1	100	79.479	Anolis_carolinensis
ENSECAG00000017002	LARP1	70	96.381	ENSANAG00000029949	LARP1	100	93.867	Aotus_nancymaae
ENSECAG00000017002	LARP1	78	64.373	ENSACLG00000015256	larp1	98	67.236	Astatotilapia_calliptera
ENSECAG00000017002	LARP1	70	70.462	ENSAMXG00000000859	larp1	88	70.607	Astyanax_mexicanus
ENSECAG00000017002	LARP1	79	96.549	ENSBTAG00000008443	LARP1	100	96.549	Bos_taurus
ENSECAG00000017002	LARP1	79	95.368	ENSCJAG00000004454	LARP1	100	95.005	Callithrix_jacchus
ENSECAG00000017002	LARP1	69	98.323	ENSCAFG00000017639	LARP1	99	98.323	Canis_familiaris
ENSECAG00000017002	LARP1	66	98.212	ENSCAFG00020023860	LARP1	100	98.212	Canis_lupus_dingo
ENSECAG00000017002	LARP1	79	95.242	ENSCHIG00000014414	LARP1	100	93.551	Capra_hircus
ENSECAG00000017002	LARP1	75	89.810	ENSTSYG00000013732	LARP1	99	92.670	Carlito_syrichta
ENSECAG00000017002	LARP1	64	93.720	ENSCAPG00000013865	LARP1	86	93.720	Cavia_aperea
ENSECAG00000017002	LARP1	69	96.436	ENSCPOG00000003377	LARP1	100	96.436	Cavia_porcellus
ENSECAG00000017002	LARP1	79	95.459	ENSCCAG00000025201	LARP1	100	94.732	Cebus_capucinus
ENSECAG00000017002	LARP1	79	92.371	ENSCATG00000030675	LARP1	100	91.557	Cercocebus_atys
ENSECAG00000017002	LARP1	71	94.207	ENSCLAG00000012755	LARP1	97	96.545	Chinchilla_lanigera
ENSECAG00000017002	LARP1	66	92.737	ENSCSAG00000010800	LARP1	100	92.791	Chlorocebus_sabaeus
ENSECAG00000017002	LARP1	66	93.043	ENSCHOG00000012716	LARP1	92	93.392	Choloepus_hoffmanni
ENSECAG00000017002	LARP1	75	79.352	ENSCPBG00000002173	LARP1	94	80.997	Chrysemys_picta_bellii
ENSECAG00000017002	LARP1	70	95.863	ENSCANG00000037418	LARP1	94	95.863	Colobus_angolensis_palliatus
ENSECAG00000017002	LARP1	79	91.008	ENSCGRG00001016913	Larp1	100	90.736	Cricetulus_griseus_chok1gshd
ENSECAG00000017002	LARP1	67	90.498	ENSCGRG00000009916	Larp1	99	91.077	Cricetulus_griseus_crigri
ENSECAG00000017002	LARP1	78	63.748	ENSCSEG00000016431	larp1	97	63.727	Cynoglossus_semilaevis
ENSECAG00000017002	LARP1	79	63.026	ENSCVAG00000022687	larp1	96	63.470	Cyprinodon_variegatus
ENSECAG00000017002	LARP1	71	66.596	ENSDARG00000101722	larp1	95	65.314	Danio_rerio
ENSECAG00000017002	LARP1	79	94.742	ENSDNOG00000012073	LARP1	100	94.742	Dasypus_novemcinctus
ENSECAG00000017002	LARP1	69	92.984	ENSDORG00000002897	Larp1	99	92.984	Dipodomys_ordii
ENSECAG00000017002	LARP1	67	96.477	ENSETEG00000020251	LARP1	100	96.477	Echinops_telfairi
ENSECAG00000017002	LARP1	79	100.000	ENSEASG00005001070	LARP1	100	100.000	Equus_asinus_asinus
ENSECAG00000017002	LARP1	67	91.221	ENSEEUG00000001065	LARP1	100	91.221	Erinaceus_europaeus
ENSECAG00000017002	LARP1	79	61.998	ENSELUG00000019403	larp1	99	62.533	Esox_lucius
ENSECAG00000017002	LARP1	79	97.550	ENSFCAG00000000592	LARP1	100	97.550	Felis_catus
ENSECAG00000017002	LARP1	58	83.963	ENSFALG00000008335	LARP1	99	81.257	Ficedula_albicollis
ENSECAG00000017002	LARP1	69	96.331	ENSFDAG00000021125	LARP1	100	96.331	Fukomys_damarensis
ENSECAG00000017002	LARP1	54	53.931	ENSFHEG00000020307	larp1	92	64.035	Fundulus_heteroclitus
ENSECAG00000017002	LARP1	78	78.703	ENSGALG00000040109	LARP1	97	79.352	Gallus_gallus
ENSECAG00000017002	LARP1	78	84.800	ENSGAGG00000025113	LARP1	99	80.786	Gopherus_agassizii
ENSECAG00000017002	LARP1	70	95.760	ENSGGOG00000006048	LARP1	94	95.760	Gorilla_gorilla
ENSECAG00000017002	LARP1	78	64.489	ENSHBUG00000020762	larp1	97	69.039	Haplochromis_burtoni
ENSECAG00000017002	LARP1	78	96.519	ENSHGLG00000006267	LARP1	100	91.674	Heterocephalus_glaber_female
ENSECAG00000017002	LARP1	78	75.721	ENSHGLG00100003395	-	96	76.218	Heterocephalus_glaber_male
ENSECAG00000017002	LARP1	69	96.122	ENSHGLG00100014230	-	100	96.122	Heterocephalus_glaber_male
ENSECAG00000017002	LARP1	72	86.351	ENSHCOG00000010786	larp1	94	86.351	Hippocampus_comes
ENSECAG00000017002	LARP1	70	67.098	ENSIPUG00000019105	Larp1	93	66.460	Ictalurus_punctatus
ENSECAG00000017002	LARP1	69	94.346	ENSSTOG00000005678	LARP1	99	94.346	Ictidomys_tridecemlineatus
ENSECAG00000017002	LARP1	79	86.467	ENSJJAG00000016950	Larp1	100	86.649	Jaculus_jaculus
ENSECAG00000017002	LARP1	78	65.052	ENSKMAG00000018468	larp1	95	68.262	Kryptolebias_marmoratus
ENSECAG00000017002	LARP1	79	62.387	ENSLBEG00000027172	larp1	99	62.953	Labrus_bergylta
ENSECAG00000017002	LARP1	78	68.079	ENSLOCG00000012457	larp1	99	68.612	Lepisosteus_oculatus
ENSECAG00000017002	LARP1	79	94.203	ENSLAFG00000008991	LARP1	100	93.569	Loxodonta_africana
ENSECAG00000017002	LARP1	69	96.138	ENSMFAG00000031651	LARP1	94	96.138	Macaca_fascicularis
ENSECAG00000017002	LARP1	69	92.678	ENSMMUG00000009411	LARP1	100	96.820	Macaca_mulatta
ENSECAG00000017002	LARP1	67	96.053	ENSMNEG00000039294	LARP1	100	96.089	Macaca_nemestrina
ENSECAG00000017002	LARP1	69	96.347	ENSMLEG00000035142	LARP1	94	96.347	Mandrillus_leucophaeus
ENSECAG00000017002	LARP1	79	64.345	ENSMAMG00000021788	larp1	99	63.795	Mastacembelus_armatus
ENSECAG00000017002	LARP1	78	64.373	ENSMZEG00005009345	larp1	98	67.236	Maylandia_zebra
ENSECAG00000017002	LARP1	67	83.128	ENSMGAG00000005696	LARP1	100	80.475	Meleagris_gallopavo
ENSECAG00000017002	LARP1	79	90.645	ENSMAUG00000001385	Larp1	100	90.009	Mesocricetus_auratus
ENSECAG00000017002	LARP1	69	95.602	ENSMICG00000000837	LARP1	99	97.092	Microcebus_murinus
ENSECAG00000017002	LARP1	79	91.099	ENSMOCG00000008920	Larp1	100	90.827	Microtus_ochrogaster
ENSECAG00000017002	LARP1	70	58.527	ENSMMOG00000013364	larp1	95	54.209	Mola_mola
ENSECAG00000017002	LARP1	69	83.212	ENSMODG00000008663	LARP1	99	83.212	Monodelphis_domestica
ENSECAG00000017002	LARP1	78	63.764	ENSMALG00000017180	larp1	92	71.037	Monopterus_albus
ENSECAG00000017002	LARP1	79	90.372	MGP_CAROLIEiJ_G0016383	Larp1	100	91.008	Mus_caroli
ENSECAG00000017002	LARP1	79	90.282	ENSMUSG00000037331	Larp1	100	90.917	Mus_musculus
ENSECAG00000017002	LARP1	79	90.563	MGP_PahariEiJ_G0017518	Larp1	100	91.289	Mus_pahari
ENSECAG00000017002	LARP1	79	90.554	MGP_SPRETEiJ_G0017225	Larp1	100	91.190	Mus_spretus
ENSECAG00000017002	LARP1	69	97.901	ENSMPUG00000013564	LARP1	99	97.901	Mustela_putorius_furo
ENSECAG00000017002	LARP1	67	96.575	ENSMLUG00000002608	LARP1	100	93.501	Myotis_lucifugus
ENSECAG00000017002	LARP1	69	91.632	ENSNGAG00000001098	Larp1	99	91.549	Nannospalax_galili
ENSECAG00000017002	LARP1	69	68.211	ENSNBRG00000008963	larp1	94	67.665	Neolamprologus_brichardi
ENSECAG00000017002	LARP1	70	92.658	ENSNLEG00000016588	LARP1	99	94.098	Nomascus_leucogenys
ENSECAG00000017002	LARP1	69	76.834	ENSMEUG00000002957	LARP1	100	77.149	Notamacropus_eugenii
ENSECAG00000017002	LARP1	69	96.541	ENSOPRG00000013014	LARP1	100	96.541	Ochotona_princeps
ENSECAG00000017002	LARP1	69	95.702	ENSODEG00000010824	LARP1	100	95.702	Octodon_degus
ENSECAG00000017002	LARP1	78	65.964	ENSONIG00000017308	larp1	99	64.775	Oreochromis_niloticus
ENSECAG00000017002	LARP1	69	86.056	ENSOANG00000005096	LARP1	100	81.143	Ornithorhynchus_anatinus
ENSECAG00000017002	LARP1	79	95.277	ENSOCUG00000013066	LARP1	100	95.277	Oryctolagus_cuniculus
ENSECAG00000017002	LARP1	78	63.619	ENSORLG00000000824	larp1	96	71.864	Oryzias_latipes
ENSECAG00000017002	LARP1	78	63.524	ENSORLG00020022241	larp1	97	63.687	Oryzias_latipes_hni
ENSECAG00000017002	LARP1	78	61.905	ENSORLG00015007538	larp1	97	61.757	Oryzias_latipes_hsok
ENSECAG00000017002	LARP1	78	62.190	ENSOMEG00000003134	larp1	97	61.722	Oryzias_melastigma
ENSECAG00000017002	LARP1	69	96.751	ENSOGAG00000016750	LARP1	100	96.751	Otolemur_garnettii
ENSECAG00000017002	LARP1	69	94.660	ENSOARG00000009893	LARP1	99	94.660	Ovis_aries
ENSECAG00000017002	LARP1	70	95.863	ENSPPAG00000042993	LARP1	94	95.863	Pan_paniscus
ENSECAG00000017002	LARP1	70	95.469	ENSPPRG00000009780	LARP1	96	95.469	Panthera_pardus
ENSECAG00000017002	LARP1	72	93.042	ENSPTIG00000007013	LARP1	96	95.469	Panthera_tigris_altaica
ENSECAG00000017002	LARP1	79	92.461	ENSPTRG00000017447	LARP1	100	91.651	Pan_troglodytes
ENSECAG00000017002	LARP1	79	92.371	ENSPANG00000008080	LARP1	100	91.651	Papio_anubis
ENSECAG00000017002	LARP1	78	60.878	ENSPKIG00000017153	-	88	66.342	Paramormyrops_kingsleyae
ENSECAG00000017002	LARP1	78	66.540	ENSPKIG00000010096	larp1	97	66.017	Paramormyrops_kingsleyae
ENSECAG00000017002	LARP1	70	66.774	ENSPMGG00000011599	larp1	92	67.929	Periophthalmus_magnuspinnatus
ENSECAG00000017002	LARP1	69	92.461	ENSPEMG00000022523	Larp1	99	92.356	Peromyscus_maniculatus_bairdii
ENSECAG00000017002	LARP1	78	80.325	ENSPCIG00000019242	LARP1	89	81.412	Phascolarctos_cinereus
ENSECAG00000017002	LARP1	78	63.333	ENSPFOG00000005836	larp1	96	62.759	Poecilia_formosa
ENSECAG00000017002	LARP1	78	64.158	ENSPLAG00000008936	larp1	96	63.288	Poecilia_latipinna
ENSECAG00000017002	LARP1	78	63.933	ENSPMEG00000013656	larp1	96	62.940	Poecilia_mexicana
ENSECAG00000017002	LARP1	67	68.256	ENSPREG00000005726	larp1	95	67.742	Poecilia_reticulata
ENSECAG00000017002	LARP1	69	91.824	ENSPCAG00000006407	LARP1	100	91.824	Procavia_capensis
ENSECAG00000017002	LARP1	67	93.007	ENSPCOG00000016949	LARP1	100	92.453	Propithecus_coquereli
ENSECAG00000017002	LARP1	79	96.739	ENSPVAG00000002262	LARP1	100	96.739	Pteropus_vampyrus
ENSECAG00000017002	LARP1	78	64.373	ENSPNYG00000007938	larp1	98	67.236	Pundamilia_nyererei
ENSECAG00000017002	LARP1	75	74.965	ENSPNAG00000021427	larp1	89	70.693	Pygocentrus_nattereri
ENSECAG00000017002	LARP1	69	92.992	ENSRNOG00000031544	Larp1	99	92.992	Rattus_norvegicus
ENSECAG00000017002	LARP1	70	96.653	ENSRBIG00000038005	LARP1	94	96.242	Rhinopithecus_bieti
ENSECAG00000017002	LARP1	70	96.787	ENSRROG00000034073	LARP1	100	96.313	Rhinopithecus_roxellana
ENSECAG00000017002	LARP1	69	96.921	ENSSBOG00000019816	LARP1	100	93.312	Saimiri_boliviensis_boliviensis
ENSECAG00000017002	LARP1	69	84.463	ENSSHAG00000011115	LARP1	100	84.463	Sarcophilus_harrisii
ENSECAG00000017002	LARP1	78	65.322	ENSSFOG00015018058	-	96	64.471	Scleropages_formosus
ENSECAG00000017002	LARP1	67	69.181	ENSSFOG00015020304	larp1	93	67.376	Scleropages_formosus
ENSECAG00000017002	LARP1	78	62.248	ENSSMAG00000007468	larp1	98	62.560	Scophthalmus_maximus
ENSECAG00000017002	LARP1	79	63.070	ENSSDUG00000000268	larp1	95	71.817	Seriola_dumerili
ENSECAG00000017002	LARP1	64	69.074	ENSSLDG00000016505	larp1	95	71.693	Seriola_lalandi_dorsalis
ENSECAG00000017002	LARP1	78	76.056	ENSSPUG00000012179	-	100	75.066	Sphenodon_punctatus
ENSECAG00000017002	LARP1	78	65.038	ENSSPAG00000003910	larp1	97	64.679	Stegastes_partitus
ENSECAG00000017002	LARP1	79	97.189	ENSSSCG00000017069	LARP1	100	97.545	Sus_scrofa
ENSECAG00000017002	LARP1	64	87.694	ENSTGUG00000000704	LARP1	100	83.315	Taeniopygia_guttata
ENSECAG00000017002	LARP1	78	63.173	ENSTRUG00000009470	larp1	99	61.594	Takifugu_rubripes
ENSECAG00000017002	LARP1	67	94.802	ENSTBEG00000003381	LARP1	100	94.802	Tupaia_belangeri
ENSECAG00000017002	LARP1	69	97.379	ENSTTRG00000015934	LARP1	100	97.379	Tursiops_truncatus
ENSECAG00000017002	LARP1	79	97.822	ENSUAMG00000019334	LARP1	100	97.822	Ursus_americanus
ENSECAG00000017002	LARP1	68	94.731	ENSUMAG00000002934	LARP1	99	94.731	Ursus_maritimus
ENSECAG00000017002	LARP1	66	98.212	ENSVVUG00000004644	LARP1	100	98.212	Vulpes_vulpes
ENSECAG00000017002	LARP1	70	76.874	ENSXETG00000008413	larp1	91	76.747	Xenopus_tropicalis
ENSECAG00000017002	LARP1	69	74.515	ENSXCOG00000004022	larp1	93	75.211	Xiphophorus_couchianus
ENSECAG00000017002	LARP1	78	63.704	ENSXMAG00000018780	larp1	96	62.795	Xiphophorus_maculatus