EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000017247 (Gene tree)
Gene ID: 100050593
Gene Symbol: RPP40
Alias: -
Full Name: ribonuclease P/MRP subunit p40
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 10203 bases
Position: chr20:5739252-5749454
Accession: 22540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000014989	Ribonuc_P_40	PF08584.11	2e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000018375	-	1365	-	ENSECAP00000014989	454 (aa)	-	F7A1K7

Gene Model

Click here to download ENSECAG00000017247's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03008	Ribosome biogenesis in eukaryotes	KEGG
ecb03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000017247's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000017247	RPP40	80	88.154	ENSG00000124787	RPP40	100	88.154	Homo_sapiens
ENSECAG00000017247	RPP40	71	31.056	ENSAPOG00000008660	rpp40	92	31.056	Acanthochromis_polyacanthus
ENSECAG00000017247	RPP40	80	91.736	ENSAMEG00000012938	RPP40	100	91.736	Ailuropoda_melanoleuca
ENSECAG00000017247	RPP40	79	37.709	ENSACIG00000003617	rpp40	98	37.709	Amphilophus_citrinellus
ENSECAG00000017247	RPP40	79	38.095	ENSAOCG00000011846	rpp40	99	38.095	Amphiprion_ocellaris
ENSECAG00000017247	RPP40	79	38.095	ENSAPEG00000001322	rpp40	99	38.095	Amphiprion_percula
ENSECAG00000017247	RPP40	79	39.833	ENSATEG00000006584	rpp40	99	39.833	Anabas_testudineus
ENSECAG00000017247	RPP40	66	68.000	ENSAPLG00000005691	RPP40	99	68.000	Anas_platyrhynchos
ENSECAG00000017247	RPP40	88	60.302	ENSACAG00000006550	RPP40	94	60.302	Anolis_carolinensis
ENSECAG00000017247	RPP40	80	86.226	ENSANAG00000029246	RPP40	100	86.226	Aotus_nancymaae
ENSECAG00000017247	RPP40	78	39.155	ENSACLG00000015883	rpp40	96	39.155	Astatotilapia_calliptera
ENSECAG00000017247	RPP40	79	46.779	ENSAMXG00000001755	rpp40	99	46.779	Astyanax_mexicanus
ENSECAG00000017247	RPP40	80	86.226	ENSBTAG00000003332	RPP40	100	86.226	Bos_taurus
ENSECAG00000017247	RPP40	80	87.328	ENSCJAG00000021373	RPP40	100	87.328	Callithrix_jacchus
ENSECAG00000017247	RPP40	80	90.358	ENSCAFG00000009435	RPP40	100	90.358	Canis_familiaris
ENSECAG00000017247	RPP40	80	90.358	ENSCAFG00020013380	RPP40	100	90.358	Canis_lupus_dingo
ENSECAG00000017247	RPP40	80	85.675	ENSCHIG00000016849	RPP40	100	85.675	Capra_hircus
ENSECAG00000017247	RPP40	80	88.981	ENSTSYG00000032857	RPP40	100	88.981	Carlito_syrichta
ENSECAG00000017247	RPP40	72	78.287	ENSCAPG00000004957	RPP40	98	78.287	Cavia_aperea
ENSECAG00000017247	RPP40	80	85.675	ENSCPOG00000005855	RPP40	100	85.675	Cavia_porcellus
ENSECAG00000017247	RPP40	80	87.328	ENSCCAG00000019809	RPP40	100	87.328	Cebus_capucinus
ENSECAG00000017247	RPP40	80	87.603	ENSCATG00000038787	RPP40	100	87.603	Cercocebus_atys
ENSECAG00000017247	RPP40	80	86.226	ENSCLAG00000003235	RPP40	100	86.226	Chinchilla_lanigera
ENSECAG00000017247	RPP40	80	87.603	ENSCSAG00000007307	RPP40	100	87.603	Chlorocebus_sabaeus
ENSECAG00000017247	RPP40	55	72.000	ENSCHOG00000005856	-	100	72.000	Choloepus_hoffmanni
ENSECAG00000017247	RPP40	79	70.000	ENSCPBG00000009003	RPP40	99	70.000	Chrysemys_picta_bellii
ENSECAG00000017247	RPP40	80	87.879	ENSCANG00000033965	RPP40	100	87.879	Colobus_angolensis_palliatus
ENSECAG00000017247	RPP40	80	80.441	ENSCGRG00001018328	Rpp40	100	80.441	Cricetulus_griseus_chok1gshd
ENSECAG00000017247	RPP40	80	80.441	ENSCGRG00000011344	Rpp40	100	80.441	Cricetulus_griseus_crigri
ENSECAG00000017247	RPP40	78	35.674	ENSCSEG00000015006	-	98	35.674	Cynoglossus_semilaevis
ENSECAG00000017247	RPP40	59	34.799	ENSCVAG00000012169	rpp40	100	34.799	Cyprinodon_variegatus
ENSECAG00000017247	RPP40	79	49.582	ENSDARG00000017605	rpp40	99	49.582	Danio_rerio
ENSECAG00000017247	RPP40	65	86.532	ENSDNOG00000048136	RPP40	99	86.532	Dasypus_novemcinctus
ENSECAG00000017247	RPP40	80	83.747	ENSDORG00000029944	-	100	83.747	Dipodomys_ordii
ENSECAG00000017247	RPP40	80	63.003	ENSDORG00000011196	-	100	63.003	Dipodomys_ordii
ENSECAG00000017247	RPP40	80	70.523	ENSETEG00000007458	RPP40	100	70.523	Echinops_telfairi
ENSECAG00000017247	RPP40	78	44.789	ENSEBUG00000000386	rpp40	99	44.789	Eptatretus_burgeri
ENSECAG00000017247	RPP40	100	98.238	ENSEASG00005012116	RPP40	100	98.238	Equus_asinus_asinus
ENSECAG00000017247	RPP40	65	69.697	ENSEEUG00000012087	RPP40	100	69.697	Erinaceus_europaeus
ENSECAG00000017247	RPP40	79	48.324	ENSELUG00000017004	rpp40	99	48.324	Esox_lucius
ENSECAG00000017247	RPP40	80	91.185	ENSFCAG00000009249	RPP40	100	91.185	Felis_catus
ENSECAG00000017247	RPP40	69	65.138	ENSFALG00000013166	RPP40	100	65.138	Ficedula_albicollis
ENSECAG00000017247	RPP40	80	88.430	ENSFDAG00000013001	-	100	88.430	Fukomys_damarensis
ENSECAG00000017247	RPP40	65	70.508	ENSFDAG00000000265	-	100	70.508	Fukomys_damarensis
ENSECAG00000017247	RPP40	79	39.496	ENSFHEG00000021429	rpp40	88	39.496	Fundulus_heteroclitus
ENSECAG00000017247	RPP40	71	39.752	ENSGMOG00000018653	rpp40	100	39.752	Gadus_morhua
ENSECAG00000017247	RPP40	79	64.722	ENSGALG00000036074	RPP40	99	64.722	Gallus_gallus
ENSECAG00000017247	RPP40	66	33.893	ENSGAFG00000004189	-	98	33.893	Gambusia_affinis
ENSECAG00000017247	RPP40	79	40.056	ENSGACG00000002472	rpp40	99	40.056	Gasterosteus_aculeatus
ENSECAG00000017247	RPP40	79	70.278	ENSGAGG00000012918	RPP40	99	70.278	Gopherus_agassizii
ENSECAG00000017247	RPP40	80	87.879	ENSGGOG00000013764	RPP40	100	87.879	Gorilla_gorilla
ENSECAG00000017247	RPP40	73	38.438	ENSHBUG00000009378	rpp40	94	38.438	Haplochromis_burtoni
ENSECAG00000017247	RPP40	80	87.328	ENSHGLG00000004871	RPP40	100	87.328	Heterocephalus_glaber_female
ENSECAG00000017247	RPP40	80	87.328	ENSHGLG00100002080	RPP40	100	87.328	Heterocephalus_glaber_male
ENSECAG00000017247	RPP40	76	32.948	ENSHCOG00000013264	-	92	32.948	Hippocampus_comes
ENSECAG00000017247	RPP40	79	47.059	ENSIPUG00000008951	RPP40	99	47.059	Ictalurus_punctatus
ENSECAG00000017247	RPP40	80	86.777	ENSSTOG00000011199	RPP40	100	86.777	Ictidomys_tridecemlineatus
ENSECAG00000017247	RPP40	80	81.818	ENSJJAG00000020629	Rpp40	100	81.818	Jaculus_jaculus
ENSECAG00000017247	RPP40	79	37.535	ENSKMAG00000019358	rpp40	99	37.535	Kryptolebias_marmoratus
ENSECAG00000017247	RPP40	79	39.776	ENSLBEG00000022724	rpp40	99	40.336	Labrus_bergylta
ENSECAG00000017247	RPP40	79	57.778	ENSLACG00000014848	RPP40	99	57.778	Latimeria_chalumnae
ENSECAG00000017247	RPP40	80	53.168	ENSLOCG00000011650	rpp40	100	53.168	Lepisosteus_oculatus
ENSECAG00000017247	RPP40	67	87.789	ENSLAFG00000007530	RPP40	100	87.789	Loxodonta_africana
ENSECAG00000017247	RPP40	80	87.328	ENSMFAG00000043100	RPP40	100	87.328	Macaca_fascicularis
ENSECAG00000017247	RPP40	80	87.052	ENSMMUG00000004966	RPP40	100	87.052	Macaca_mulatta
ENSECAG00000017247	RPP40	80	87.879	ENSMNEG00000041986	RPP40	100	87.879	Macaca_nemestrina
ENSECAG00000017247	RPP40	72	85.795	ENSMLEG00000040851	RPP40	100	85.795	Mandrillus_leucophaeus
ENSECAG00000017247	RPP40	79	40.336	ENSMAMG00000019551	rpp40	98	40.336	Mastacembelus_armatus
ENSECAG00000017247	RPP40	80	39.612	ENSMZEG00005019475	rpp40	99	39.612	Maylandia_zebra
ENSECAG00000017247	RPP40	79	62.500	ENSMGAG00000004009	RPP40	99	62.500	Meleagris_gallopavo
ENSECAG00000017247	RPP40	80	84.848	ENSMAUG00000010268	Rpp40	100	84.848	Mesocricetus_auratus
ENSECAG00000017247	RPP40	91	82.482	ENSMICG00000003297	RPP40	100	84.298	Microcebus_murinus
ENSECAG00000017247	RPP40	80	83.747	ENSMOCG00000000305	Rpp40	100	83.747	Microtus_ochrogaster
ENSECAG00000017247	RPP40	79	35.294	ENSMMOG00000020591	-	99	35.294	Mola_mola
ENSECAG00000017247	RPP40	80	80.495	ENSMODG00000009826	RPP40	100	80.495	Monodelphis_domestica
ENSECAG00000017247	RPP40	79	38.655	ENSMALG00000020133	rpp40	99	38.655	Monopterus_albus
ENSECAG00000017247	RPP40	80	85.675	MGP_CAROLIEiJ_G0018429	Rpp40	100	85.675	Mus_caroli
ENSECAG00000017247	RPP40	80	85.950	ENSMUSG00000021418	Rpp40	100	85.950	Mus_musculus
ENSECAG00000017247	RPP40	80	84.848	MGP_PahariEiJ_G0019497	Rpp40	100	84.848	Mus_pahari
ENSECAG00000017247	RPP40	80	85.675	MGP_SPRETEiJ_G0019309	Rpp40	100	85.675	Mus_spretus
ENSECAG00000017247	RPP40	81	91.257	ENSMPUG00000000530	RPP40	99	88.342	Mustela_putorius_furo
ENSECAG00000017247	RPP40	80	90.634	ENSMLUG00000000501	RPP40	100	90.634	Myotis_lucifugus
ENSECAG00000017247	RPP40	80	85.950	ENSNGAG00000023955	-	100	85.950	Nannospalax_galili
ENSECAG00000017247	RPP40	76	75.723	ENSNGAG00000022529	-	100	75.723	Nannospalax_galili
ENSECAG00000017247	RPP40	70	34.985	ENSNBRG00000017465	rpp40	86	35.168	Neolamprologus_brichardi
ENSECAG00000017247	RPP40	80	87.328	ENSNLEG00000034397	RPP40	100	87.328	Nomascus_leucogenys
ENSECAG00000017247	RPP40	80	76.309	ENSMEUG00000005300	RPP40	100	76.309	Notamacropus_eugenii
ENSECAG00000017247	RPP40	80	79.890	ENSODEG00000018153	-	100	79.890	Octodon_degus
ENSECAG00000017247	RPP40	80	83.747	ENSODEG00000007255	-	100	83.747	Octodon_degus
ENSECAG00000017247	RPP40	71	76.398	ENSODEG00000006170	-	100	76.398	Octodon_degus
ENSECAG00000017247	RPP40	80	38.781	ENSONIG00000014016	rpp40	99	38.781	Oreochromis_niloticus
ENSECAG00000017247	RPP40	67	75.248	ENSOANG00000001200	RPP40	99	75.248	Ornithorhynchus_anatinus
ENSECAG00000017247	RPP40	80	77.008	ENSOCUG00000000354	RPP40	99	77.008	Oryctolagus_cuniculus
ENSECAG00000017247	RPP40	79	37.500	ENSORLG00000008242	-	100	38.056	Oryzias_latipes
ENSECAG00000017247	RPP40	81	37.297	ENSORLG00020013745	-	93	37.297	Oryzias_latipes_hni
ENSECAG00000017247	RPP40	79	37.778	ENSORLG00015000887	-	100	37.778	Oryzias_latipes_hsok
ENSECAG00000017247	RPP40	79	38.056	ENSOMEG00000002747	rpp40	100	38.056	Oryzias_melastigma
ENSECAG00000017247	RPP40	80	89.807	ENSOGAG00000006055	RPP40	100	89.807	Otolemur_garnettii
ENSECAG00000017247	RPP40	73	81.982	ENSOARG00000018783	RPP40	100	84.158	Ovis_aries
ENSECAG00000017247	RPP40	80	87.879	ENSPPAG00000023703	RPP40	100	87.879	Pan_paniscus
ENSECAG00000017247	RPP40	80	90.909	ENSPPRG00000005612	RPP40	100	90.909	Panthera_pardus
ENSECAG00000017247	RPP40	80	85.124	ENSPTIG00000018847	RPP40	100	85.124	Panthera_tigris_altaica
ENSECAG00000017247	RPP40	80	88.154	ENSPTRG00000017690	RPP40	100	88.154	Pan_troglodytes
ENSECAG00000017247	RPP40	80	87.879	ENSPANG00000017865	RPP40	100	87.879	Papio_anubis
ENSECAG00000017247	RPP40	79	50.139	ENSPKIG00000006311	rpp40	99	50.139	Paramormyrops_kingsleyae
ENSECAG00000017247	RPP40	74	74.777	ENSPEMG00000020809	Rpp40	91	74.777	Peromyscus_maniculatus_bairdii
ENSECAG00000017247	RPP40	60	45.985	ENSPMAG00000008412	rpp40	99	45.985	Petromyzon_marinus
ENSECAG00000017247	RPP40	80	81.543	ENSPCIG00000010682	RPP40	100	81.543	Phascolarctos_cinereus
ENSECAG00000017247	RPP40	79	35.933	ENSPFOG00000011460	rpp40	98	35.933	Poecilia_formosa
ENSECAG00000017247	RPP40	79	36.415	ENSPLAG00000001334	rpp40	99	36.415	Poecilia_latipinna
ENSECAG00000017247	RPP40	79	36.134	ENSPMEG00000007721	rpp40	99	36.134	Poecilia_mexicana
ENSECAG00000017247	RPP40	79	37.255	ENSPREG00000009215	rpp40	99	37.255	Poecilia_reticulata
ENSECAG00000017247	RPP40	80	87.879	ENSPPYG00000016194	RPP40	100	87.879	Pongo_abelii
ENSECAG00000017247	RPP40	80	91.185	ENSPCOG00000003907	RPP40	100	91.185	Propithecus_coquereli
ENSECAG00000017247	RPP40	80	93.939	ENSPVAG00000011325	RPP40	100	93.939	Pteropus_vampyrus
ENSECAG00000017247	RPP40	66	39.597	ENSPNYG00000004432	rpp40	98	39.597	Pundamilia_nyererei
ENSECAG00000017247	RPP40	79	47.207	ENSPNAG00000019125	rpp40	99	47.207	Pygocentrus_nattereri
ENSECAG00000017247	RPP40	80	85.399	ENSRNOG00000016226	Rpp40	100	85.399	Rattus_norvegicus
ENSECAG00000017247	RPP40	80	88.154	ENSRBIG00000035800	RPP40	100	88.154	Rhinopithecus_bieti
ENSECAG00000017247	RPP40	80	88.154	ENSRROG00000039116	RPP40	100	88.154	Rhinopithecus_roxellana
ENSECAG00000017247	RPP40	80	87.052	ENSSBOG00000020297	RPP40	100	87.052	Saimiri_boliviensis_boliviensis
ENSECAG00000017247	RPP40	61	79.496	ENSSHAG00000002102	RPP40	100	79.496	Sarcophilus_harrisii
ENSECAG00000017247	RPP40	80	48.361	ENSSFOG00015001142	rpp40	82	48.361	Scleropages_formosus
ENSECAG00000017247	RPP40	79	38.936	ENSSDUG00000007202	rpp40	99	38.936	Seriola_dumerili
ENSECAG00000017247	RPP40	79	39.216	ENSSLDG00000017563	rpp40	99	39.216	Seriola_lalandi_dorsalis
ENSECAG00000017247	RPP40	79	67.222	ENSSPUG00000017487	-	99	67.222	Sphenodon_punctatus
ENSECAG00000017247	RPP40	65	66.780	ENSSPUG00000018950	-	100	66.780	Sphenodon_punctatus
ENSECAG00000017247	RPP40	79	39.496	ENSSPAG00000022716	rpp40	99	39.496	Stegastes_partitus
ENSECAG00000017247	RPP40	80	86.226	ENSSSCG00000000998	RPP40	100	86.226	Sus_scrofa
ENSECAG00000017247	RPP40	79	65.642	ENSTGUG00000002258	-	100	65.642	Taeniopygia_guttata
ENSECAG00000017247	RPP40	78	39.943	ENSTRUG00000003755	rpp40	98	39.943	Takifugu_rubripes
ENSECAG00000017247	RPP40	78	38.527	ENSTNIG00000003077	rpp40	98	38.527	Tetraodon_nigroviridis
ENSECAG00000017247	RPP40	55	59.600	ENSTBEG00000014467	-	73	59.600	Tupaia_belangeri
ENSECAG00000017247	RPP40	80	81.492	ENSTTRG00000007319	RPP40	100	81.492	Tursiops_truncatus
ENSECAG00000017247	RPP40	80	91.736	ENSUAMG00000002159	RPP40	100	91.736	Ursus_americanus
ENSECAG00000017247	RPP40	86	88.718	ENSUMAG00000018639	RPP40	100	88.718	Ursus_maritimus
ENSECAG00000017247	RPP40	65	65.646	ENSVPAG00000004652	-	99	65.646	Vicugna_pacos
ENSECAG00000017247	RPP40	80	89.807	ENSVVUG00000005451	RPP40	100	89.807	Vulpes_vulpes
ENSECAG00000017247	RPP40	80	53.699	ENSXETG00000017617	rpp40	100	53.699	Xenopus_tropicalis
ENSECAG00000017247	RPP40	79	30.532	ENSXMAG00000024940	rpp40	98	30.532	Xiphophorus_maculatus