EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000017289 (Gene tree)
Gene ID: 100057522
Gene Symbol: RNASEH2C
Alias: AGS3|AYP1
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 1081 bases
Position: chr12:29568174-29569254
Accession: 100057522
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000014836	RNase_H2_suC	PF08615.11	3.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000018200	RNASEH2C-201	501	-	ENSECAP00000014836	166 (aa)	XP_001494393	F6WNX0

Gene Model

Click here to download ENSECAG00000017289's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000017289's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000017289	RNASEH2C	100	75.904	ENSG00000172922	RNASEH2C	100	76.506	Homo_sapiens
ENSECAG00000017289	RNASEH2C	100	80.814	ENSAMEG00000017348	RNASEH2C	100	80.814	Ailuropoda_melanoleuca
ENSECAG00000017289	RNASEH2C	100	75.301	ENSANAG00000032535	RNASEH2C	100	74.269	Aotus_nancymaae
ENSECAG00000017289	RNASEH2C	100	72.289	ENSBTAG00000005577	RNASEH2C	100	72.289	Bos_taurus
ENSECAG00000017289	RNASEH2C	100	74.096	ENSCJAG00000001965	RNASEH2C	100	72.892	Callithrix_jacchus
ENSECAG00000017289	RNASEH2C	100	78.488	ENSCAFG00000013292	RNASEH2C	100	77.326	Canis_familiaris
ENSECAG00000017289	RNASEH2C	100	78.488	ENSCAFG00020015077	RNASEH2C	100	77.326	Canis_lupus_dingo
ENSECAG00000017289	RNASEH2C	100	71.687	ENSCHIG00000013681	RNASEH2C	100	71.687	Capra_hircus
ENSECAG00000017289	RNASEH2C	65	66.087	ENSTSYG00000028658	-	65	66.667	Carlito_syrichta
ENSECAG00000017289	RNASEH2C	100	69.767	ENSCPOG00000013696	RNASEH2C	100	66.860	Cavia_porcellus
ENSECAG00000017289	RNASEH2C	100	74.699	ENSCCAG00000025461	RNASEH2C	100	73.684	Cebus_capucinus
ENSECAG00000017289	RNASEH2C	99	65.244	ENSCLAG00000016534	RNASEH2C	99	65.244	Chinchilla_lanigera
ENSECAG00000017289	RNASEH2C	100	77.108	ENSCSAG00000007985	RNASEH2C	100	77.108	Chlorocebus_sabaeus
ENSECAG00000017289	RNASEH2C	100	75.904	ENSCANG00000039373	RNASEH2C	100	75.904	Colobus_angolensis_palliatus
ENSECAG00000017289	RNASEH2C	100	68.072	ENSCGRG00001015383	Rnaseh2c	100	68.072	Cricetulus_griseus_chok1gshd
ENSECAG00000017289	RNASEH2C	100	68.072	ENSCGRG00000012179	Rnaseh2c	100	68.072	Cricetulus_griseus_crigri
ENSECAG00000017289	RNASEH2C	100	70.238	ENSDNOG00000035155	RNASEH2C	99	69.318	Dasypus_novemcinctus
ENSECAG00000017289	RNASEH2C	100	70.690	ENSDORG00000023624	Rnaseh2c	100	70.349	Dipodomys_ordii
ENSECAG00000017289	RNASEH2C	75	68.462	ENSETEG00000020048	-	100	67.969	Echinops_telfairi
ENSECAG00000017289	RNASEH2C	52	67.816	ENSETEG00000015293	-	81	67.816	Echinops_telfairi
ENSECAG00000017289	RNASEH2C	100	99.398	ENSEASG00005004302	RNASEH2C	100	99.398	Equus_asinus_asinus
ENSECAG00000017289	RNASEH2C	100	79.651	ENSFCAG00000044095	RNASEH2C	100	77.907	Felis_catus
ENSECAG00000017289	RNASEH2C	100	59.669	ENSFDAG00000011974	RNASEH2C	100	57.955	Fukomys_damarensis
ENSECAG00000017289	RNASEH2C	100	69.767	ENSHGLG00000013478	RNASEH2C	100	69.767	Heterocephalus_glaber_female
ENSECAG00000017289	RNASEH2C	100	69.767	ENSHGLG00100019352	RNASEH2C	100	69.767	Heterocephalus_glaber_male
ENSECAG00000017289	RNASEH2C	100	71.676	ENSSTOG00000019410	RNASEH2C	100	71.676	Ictidomys_tridecemlineatus
ENSECAG00000017289	RNASEH2C	100	69.277	ENSJJAG00000019320	Rnaseh2c	100	68.072	Jaculus_jaculus
ENSECAG00000017289	RNASEH2C	100	72.674	ENSLAFG00000015641	RNASEH2C	100	72.781	Loxodonta_africana
ENSECAG00000017289	RNASEH2C	100	75.904	ENSMFAG00000038096	-	100	75.904	Macaca_fascicularis
ENSECAG00000017289	RNASEH2C	100	75.301	ENSMFAG00000042754	-	100	75.301	Macaca_fascicularis
ENSECAG00000017289	RNASEH2C	100	76.506	ENSMMUG00000016234	-	100	76.506	Macaca_mulatta
ENSECAG00000017289	RNASEH2C	98	73.620	ENSMMUG00000019837	RNASEH2C	74	73.620	Macaca_mulatta
ENSECAG00000017289	RNASEH2C	100	76.506	ENSMNEG00000040939	RNASEH2C	100	76.506	Macaca_nemestrina
ENSECAG00000017289	RNASEH2C	100	68.072	ENSMAUG00000016346	Rnaseh2c	100	68.072	Mesocricetus_auratus
ENSECAG00000017289	RNASEH2C	100	74.118	ENSMICG00000008882	RNASEH2C	100	74.118	Microcebus_murinus
ENSECAG00000017289	RNASEH2C	100	64.286	ENSMOCG00000013231	Rnaseh2c	100	64.286	Microtus_ochrogaster
ENSECAG00000017289	RNASEH2C	90	52.667	ENSMODG00000009547	-	90	51.333	Monodelphis_domestica
ENSECAG00000017289	RNASEH2C	100	63.253	MGP_CAROLIEiJ_G0022560	Rnaseh2c	100	63.253	Mus_caroli
ENSECAG00000017289	RNASEH2C	100	64.458	ENSMUSG00000024925	Rnaseh2c	100	64.458	Mus_musculus
ENSECAG00000017289	RNASEH2C	100	65.060	MGP_PahariEiJ_G0014057	Rnaseh2c	100	64.458	Mus_pahari
ENSECAG00000017289	RNASEH2C	100	80.814	ENSMPUG00000011629	RNASEH2C	100	80.814	Mustela_putorius_furo
ENSECAG00000017289	RNASEH2C	100	76.471	ENSMLUG00000008777	RNASEH2C	100	75.294	Myotis_lucifugus
ENSECAG00000017289	RNASEH2C	100	56.024	ENSNGAG00000020391	Rnaseh2c	100	56.024	Nannospalax_galili
ENSECAG00000017289	RNASEH2C	100	74.096	ENSNLEG00000005833	-	100	74.096	Nomascus_leucogenys
ENSECAG00000017289	RNASEH2C	92	45.752	ENSMEUG00000006205	-	93	45.752	Notamacropus_eugenii
ENSECAG00000017289	RNASEH2C	100	68.208	ENSODEG00000017806	RNASEH2C	100	66.265	Octodon_degus
ENSECAG00000017289	RNASEH2C	100	77.647	ENSOGAG00000014128	RNASEH2C	100	77.647	Otolemur_garnettii
ENSECAG00000017289	RNASEH2C	100	71.687	ENSOARG00000017675	RNASEH2C	100	71.687	Ovis_aries
ENSECAG00000017289	RNASEH2C	100	72.455	ENSPPAG00000042592	-	84	73.054	Pan_paniscus
ENSECAG00000017289	RNASEH2C	100	78.488	ENSPPRG00000000774	RNASEH2C	100	77.711	Panthera_pardus
ENSECAG00000017289	RNASEH2C	100	76.163	ENSPTIG00000011677	RNASEH2C	100	74.096	Panthera_tigris_altaica
ENSECAG00000017289	RNASEH2C	100	75.904	ENSPTRG00000038742	RNASEH2C	100	76.506	Pan_troglodytes
ENSECAG00000017289	RNASEH2C	99	73.780	ENSPANG00000015965	RNASEH2C	66	73.780	Papio_anubis
ENSECAG00000017289	RNASEH2C	100	66.265	ENSPEMG00000018577	Rnaseh2c	100	66.265	Peromyscus_maniculatus_bairdii
ENSECAG00000017289	RNASEH2C	100	75.904	ENSPPYG00000003051	RNASEH2C	100	76.506	Pongo_abelii
ENSECAG00000017289	RNASEH2C	100	70.930	ENSPCAG00000007887	RNASEH2C	100	70.930	Procavia_capensis
ENSECAG00000017289	RNASEH2C	100	74.118	ENSPCOG00000021092	RNASEH2C	100	74.118	Propithecus_coquereli
ENSECAG00000017289	RNASEH2C	100	73.988	ENSPVAG00000016950	RNASEH2C	100	73.988	Pteropus_vampyrus
ENSECAG00000017289	RNASEH2C	100	64.458	ENSRNOG00000020700	Rnaseh2c	100	64.458	Rattus_norvegicus
ENSECAG00000017289	RNASEH2C	99	74.390	ENSRBIG00000040124	RNASEH2C	66	74.390	Rhinopithecus_bieti
ENSECAG00000017289	RNASEH2C	99	74.390	ENSRROG00000044910	RNASEH2C	99	76.582	Rhinopithecus_roxellana
ENSECAG00000017289	RNASEH2C	100	74.699	ENSSBOG00000034781	RNASEH2C	100	73.684	Saimiri_boliviensis_boliviensis
ENSECAG00000017289	RNASEH2C	100	76.744	ENSSSCG00000012979	RNASEH2C	100	76.163	Sus_scrofa
ENSECAG00000017289	RNASEH2C	100	52.907	ENSTTRG00000016928	RNASEH2C	100	52.907	Tursiops_truncatus
ENSECAG00000017289	RNASEH2C	100	78.488	ENSUAMG00000020793	RNASEH2C	100	78.488	Ursus_americanus
ENSECAG00000017289	RNASEH2C	100	77.907	ENSUMAG00000010791	RNASEH2C	100	77.907	Ursus_maritimus
ENSECAG00000017289	RNASEH2C	95	69.697	ENSVPAG00000006579	RNASEH2C	100	68.263	Vicugna_pacos
ENSECAG00000017289	RNASEH2C	96	75.152	ENSVVUG00000027076	RNASEH2C	77	73.939	Vulpes_vulpes