EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSECAG00000017526 (Gene tree)
Gene ID
100053469
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Equus_caballus
Status
putative
Strand
Plus strand
Length
22752 bases
Position
chr8:16145426-16168177
Accession
55189
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSECAP00000015386RRM_1PF00076.228.1e-3412
ENSECAP00000015386RRM_1PF00076.228.1e-3422
ENSECAP00000026033RRM_1PF00076.221.4e-3312
ENSECAP00000026033RRM_1PF00076.221.4e-3322
ENSECAP00000038673RRM_1PF00076.221.6e-3312
ENSECAP00000038673RRM_1PF00076.221.6e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSECAT00000018838-2606-ENSECAP00000015386362 (aa)XP_023502797F6SHE7
ENSECAT00000039641-2828-ENSECAP00000026033436 (aa)--
ENSECAT00000057459-2885-ENSECAP00000038673455 (aa)--
Gene Model
Click here to download ENSECAG00000017526's gene model file
Pathways
Pathway IDPathway NameSource
ecb03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000017526's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSECAG00000017526MSI15239.437ENSECAG00000024257RBM39740.741
ENSECAG00000017526MSI15042.308ENSECAG00000008676HNRNPA17539.224
ENSECAG00000017526MSI15140.686ENSECAG00000023237HNRNPA36241.315
ENSECAG00000017526MSI15042.308ENSECAG00000028129-6443.716
ENSECAG00000017526MSI15241.346ENSECAG00000011805DAZAP15141.346
ENSECAG00000017526MSI15043.169ENSECAG00000040564-6042.021
ENSECAG00000017526MSI18433.684ENSECAG00000007700RBM388932.258
ENSECAG00000017526MSI15038.462ENSECAG00000006699-6238.624
ENSECAG00000017526MSI19669.663ENSECAG00000011435MSI29671.831
ENSECAG00000017526MSI15046.111ENSECAG00000018242-8638.267
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSECAG00000017526MSI1100100.000ENSG00000135097MSI1100100.000Homo_sapiens
ENSECAG00000017526MSI110083.791ENSAPOG00000003191MSI110083.791Acanthochromis_polyacanthus
ENSECAG00000017526MSI110084.254ENSAPOG00000023458-10084.254Acanthochromis_polyacanthus
ENSECAG00000017526MSI19881.365ENSAMEG00000013302MSI110085.635Ailuropoda_melanoleuca
ENSECAG00000017526MSI19182.675ENSACIG00000017754-7987.025Amphilophus_citrinellus
ENSECAG00000017526MSI19877.485ENSAOCG00000009031-9681.538Amphiprion_ocellaris
ENSECAG00000017526MSI110083.791ENSAOCG00000003804MSI110083.791Amphiprion_ocellaris
ENSECAG00000017526MSI110084.254ENSAPEG00000006857-8484.254Amphiprion_percula
ENSECAG00000017526MSI110083.791ENSAPEG00000003245MSI110083.791Amphiprion_percula
ENSECAG00000017526MSI110078.415ENSATEG00000023779-10078.415Anabas_testudineus
ENSECAG00000017526MSI110080.435ENSATEG00000017059MSI110080.435Anabas_testudineus
ENSECAG00000017526MSI110096.419ENSACAG00000002762MSI110096.419Anolis_carolinensis
ENSECAG00000017526MSI1100100.000ENSANAG00000027151MSI1100100.000Aotus_nancymaae
ENSECAG00000017526MSI18296.309ENSANAG00000027901-9296.309Aotus_nancymaae
ENSECAG00000017526MSI110083.242ENSACLG00000011230MSI110083.242Astatotilapia_calliptera
ENSECAG00000017526MSI110083.978ENSACLG00000000117-10085.337Astatotilapia_calliptera
ENSECAG00000017526MSI19483.735ENSAMXG00000038960msi17584.984Astyanax_mexicanus
ENSECAG00000017526MSI1100100.000ENSBTAG00000009800MSI1100100.000Bos_taurus
ENSECAG00000017526MSI1100100.000ENSCJAG00000008578MSI1100100.000Callithrix_jacchus
ENSECAG00000017526MSI110099.724ENSCAFG00000010283MSI110099.724Canis_familiaris
ENSECAG00000017526MSI194100.000ENSCAFG00020020585MSI1100100.000Canis_lupus_dingo
ENSECAG00000017526MSI110094.580ENSCHIG00000024304MSI110094.580Capra_hircus
ENSECAG00000017526MSI194100.000ENSTSYG00000033949MSI195100.000Carlito_syrichta
ENSECAG00000017526MSI19489.776ENSCAPG00000003919MSI18989.776Cavia_aperea
ENSECAG00000017526MSI198100.000ENSCPOG00000012361MSI1100100.000Cavia_porcellus
ENSECAG00000017526MSI1100100.000ENSCCAG00000035567MSI1100100.000Cebus_capucinus
ENSECAG00000017526MSI1100100.000ENSCATG00000030019MSI1100100.000Cercocebus_atys
ENSECAG00000017526MSI198100.000ENSCLAG00000011329MSI1100100.000Chinchilla_lanigera
ENSECAG00000017526MSI17596.390ENSCSAG00000002265MSI19696.390Chlorocebus_sabaeus
ENSECAG00000017526MSI110095.856ENSCPBG00000011349MSI110095.856Chrysemys_picta_bellii
ENSECAG00000017526MSI198100.000ENSCANG00000040651MSI1100100.000Colobus_angolensis_palliatus
ENSECAG00000017526MSI1100100.000ENSCGRG00001018883Msi1100100.000Cricetulus_griseus_chok1gshd
ENSECAG00000017526MSI194100.000ENSCGRG00000002191Msi172100.000Cricetulus_griseus_crigri
ENSECAG00000017526MSI110083.149ENSCSEG00000008352-10083.149Cynoglossus_semilaevis
ENSECAG00000017526MSI19878.299ENSCSEG00000011032MSI110082.919Cynoglossus_semilaevis
ENSECAG00000017526MSI110083.516ENSCSEG00000005834-10083.516Cynoglossus_semilaevis
ENSECAG00000017526MSI110084.254ENSCVAG00000009100MSI110084.254Cyprinodon_variegatus
ENSECAG00000017526MSI16468.398ENSCVAG00000017463-8968.398Cyprinodon_variegatus
ENSECAG00000017526MSI19881.402ENSDARG00000010710msi19986.408Danio_rerio
ENSECAG00000017526MSI18082.096ENSDARG00000102015CABZ01037298.18982.096Danio_rerio
ENSECAG00000017526MSI19889.970ENSDNOG00000005713MSI19189.970Dasypus_novemcinctus
ENSECAG00000017526MSI19899.102ENSDORG00000005610Msi19995.480Dipodomys_ordii
ENSECAG00000017526MSI19895.732ENSETEG00000004756MSI110095.732Echinops_telfairi
ENSECAG00000017526MSI1100100.000ENSEASG00005004736MSI1100100.000Equus_asinus_asinus
ENSECAG00000017526MSI19481.232ENSELUG00000023280-10080.938Esox_lucius
ENSECAG00000017526MSI19480.387ENSELUG00000023219MSI19379.620Esox_lucius
ENSECAG00000017526MSI1100100.000ENSFCAG00000011007MSI1100100.000Felis_catus
ENSECAG00000017526MSI19895.820ENSFALG00000007574MSI110095.820Ficedula_albicollis
ENSECAG00000017526MSI19899.695ENSFDAG00000019586MSI110099.695Fukomys_damarensis
ENSECAG00000017526MSI110083.791ENSFHEG00000003560-10083.791Fundulus_heteroclitus
ENSECAG00000017526MSI110084.530ENSFHEG00000022446MSI110084.530Fundulus_heteroclitus
ENSECAG00000017526MSI110076.584ENSGMOG00000017838-10076.584Gadus_morhua
ENSECAG00000017526MSI110082.597ENSGMOG00000001006MSI19982.320Gadus_morhua
ENSECAG00000017526MSI19495.238ENSGALG00000007227MSI19886.957Gallus_gallus
ENSECAG00000017526MSI110065.205ENSGAFG00000005860-10065.205Gambusia_affinis
ENSECAG00000017526MSI19885.380ENSGAFG00000021522MSI19983.008Gambusia_affinis
ENSECAG00000017526MSI110080.663ENSGACG00000008674-10080.663Gasterosteus_aculeatus
ENSECAG00000017526MSI110083.425ENSGACG00000012679MSI110083.425Gasterosteus_aculeatus
ENSECAG00000017526MSI110095.580ENSGAGG00000016037MSI110095.580Gopherus_agassizii
ENSECAG00000017526MSI194100.000ENSGGOG00000010328MSI1100100.000Gorilla_gorilla
ENSECAG00000017526MSI110083.242ENSHBUG00000021921MSI110083.242Haplochromis_burtoni
ENSECAG00000017526MSI110083.978ENSHBUG00000011841-10083.978Haplochromis_burtoni
ENSECAG00000017526MSI110099.724ENSHGLG00000012782MSI110099.724Heterocephalus_glaber_female
ENSECAG00000017526MSI19899.695ENSHGLG00100016848MSI110099.695Heterocephalus_glaber_male
ENSECAG00000017526MSI19880.938ENSHCOG00000012019MSI110085.714Hippocampus_comes
ENSECAG00000017526MSI110078.689ENSHCOG00000012067-10078.689Hippocampus_comes
ENSECAG00000017526MSI110082.320ENSIPUG00000001976msi19984.026Ictalurus_punctatus
ENSECAG00000017526MSI194100.000ENSSTOG00000009799MSI1100100.000Ictidomys_tridecemlineatus
ENSECAG00000017526MSI1100100.000ENSJJAG00000010463Msi1100100.000Jaculus_jaculus
ENSECAG00000017526MSI110084.530ENSJJAG00000010643-10084.254Jaculus_jaculus
ENSECAG00000017526MSI110083.702ENSKMAG00000011251MSI110083.702Kryptolebias_marmoratus
ENSECAG00000017526MSI19883.578ENSKMAG00000019877-10088.509Kryptolebias_marmoratus
ENSECAG00000017526MSI110083.242ENSLBEG00000001375-10083.242Labrus_bergylta
ENSECAG00000017526MSI110084.254ENSLBEG00000008789MSI110084.254Labrus_bergylta
ENSECAG00000017526MSI19887.427ENSLACG00000018287MSI110087.427Latimeria_chalumnae
ENSECAG00000017526MSI15070.000ENSLOCG00000008618zgc:1107967170.000Lepisosteus_oculatus
ENSECAG00000017526MSI19189.426ENSLAFG00000009412MSI110089.426Loxodonta_africana
ENSECAG00000017526MSI198100.000ENSMFAG00000001798MSI1100100.000Macaca_fascicularis
ENSECAG00000017526MSI19798.291ENSMMUG00000031527MSI19699.708Macaca_mulatta
ENSECAG00000017526MSI1100100.000ENSMNEG00000040034MSI1100100.000Macaca_nemestrina
ENSECAG00000017526MSI198100.000ENSMLEG00000003921MSI1100100.000Mandrillus_leucophaeus
ENSECAG00000017526MSI19685.960ENSMAMG00000018426-9786.930Mastacembelus_armatus
ENSECAG00000017526MSI110083.425ENSMAMG00000002279MSI110083.425Mastacembelus_armatus
ENSECAG00000017526MSI110083.242ENSMZEG00005026892MSI110083.242Maylandia_zebra
ENSECAG00000017526MSI110083.978ENSMZEG00005000340-10083.978Maylandia_zebra
ENSECAG00000017526MSI16498.817ENSMGAG00000016518-10098.817Meleagris_gallopavo
ENSECAG00000017526MSI171100.000ENSMAUG00000016820Msi1100100.000Mesocricetus_auratus
ENSECAG00000017526MSI1100100.000ENSMICG00000033181MSI1100100.000Microcebus_murinus
ENSECAG00000017526MSI110099.724ENSMOCG00000002286Msi110099.724Microtus_ochrogaster
ENSECAG00000017526MSI19881.571ENSMMOG00000012265-9786.538Mola_mola
ENSECAG00000017526MSI19876.316ENSMMOG00000010492MSI19879.167Mola_mola
ENSECAG00000017526MSI19167.771ENSMODG00000003189-10067.771Monodelphis_domestica
ENSECAG00000017526MSI110083.978ENSMALG00000017889MSI110083.978Monopterus_albus
ENSECAG00000017526MSI19885.044ENSMALG00000001426-10086.646Monopterus_albus
ENSECAG00000017526MSI110099.448MGP_CAROLIEiJ_G0027626Msi110099.490Mus_caroli
ENSECAG00000017526MSI110099.448ENSMUSG00000054256Msi110099.490Mus_musculus
ENSECAG00000017526MSI110099.171MGP_PahariEiJ_G0024206Msi110099.171Mus_pahari
ENSECAG00000017526MSI110099.448MGP_SPRETEiJ_G0028624Msi110099.490Mus_spretus
ENSECAG00000017526MSI194100.000ENSMPUG00000003168MSI1100100.000Mustela_putorius_furo
ENSECAG00000017526MSI19490.179ENSMLUG00000010313MSI110090.179Myotis_lucifugus
ENSECAG00000017526MSI19893.855ENSNGAG00000014508Msi191100.000Nannospalax_galili
ENSECAG00000017526MSI110083.978ENSNBRG00000000841-10083.978Neolamprologus_brichardi
ENSECAG00000017526MSI18877.432ENSNBRG00000018012MSI19977.432Neolamprologus_brichardi
ENSECAG00000017526MSI19189.634ENSNLEG00000015636MSI110089.634Nomascus_leucogenys
ENSECAG00000017526MSI19477.744ENSMEUG00000015759MSI110077.744Notamacropus_eugenii
ENSECAG00000017526MSI19492.063ENSOPRG00000016879MSI110092.063Ochotona_princeps
ENSECAG00000017526MSI198100.000ENSODEG00000006328MSI1100100.000Octodon_degus
ENSECAG00000017526MSI110083.978ENSONIG00000011182MSI110083.978Oreochromis_niloticus
ENSECAG00000017526MSI110083.516ENSONIG00000019452-10083.516Oreochromis_niloticus
ENSECAG00000017526MSI19499.678ENSOCUG00000027716MSI110099.678Oryctolagus_cuniculus
ENSECAG00000017526MSI110083.791ENSORLG00000029593MSI110083.791Oryzias_latipes
ENSECAG00000017526MSI110084.530ENSORLG00000019978-10084.530Oryzias_latipes
ENSECAG00000017526MSI110083.791ENSORLG00020008266MSI19987.273Oryzias_latipes_hni
ENSECAG00000017526MSI110084.530ENSORLG00020001208-7184.530Oryzias_latipes_hni
ENSECAG00000017526MSI110084.530ENSORLG00015013672-7187.307Oryzias_latipes_hsok
ENSECAG00000017526MSI110083.791ENSORLG00015003916MSI19987.273Oryzias_latipes_hsok
ENSECAG00000017526MSI19886.842ENSOMEG00000002272-10084.615Oryzias_melastigma
ENSECAG00000017526MSI110084.807ENSOMEG00000017536MSI110084.807Oryzias_melastigma
ENSECAG00000017526MSI19995.604ENSOGAG00000003847MSI19899.130Otolemur_garnettii
ENSECAG00000017526MSI19496.061ENSOARG00000012097MSI110096.061Ovis_aries
ENSECAG00000017526MSI198100.000ENSPPAG00000043073MSI1100100.000Pan_paniscus
ENSECAG00000017526MSI1100100.000ENSPPRG00000000370MSI1100100.000Panthera_pardus
ENSECAG00000017526MSI194100.000ENSPTIG00000008913MSI1100100.000Panthera_tigris_altaica
ENSECAG00000017526MSI1100100.000ENSPTRG00000005531MSI1100100.000Pan_troglodytes
ENSECAG00000017526MSI110099.724ENSPANG00000006335MSI110099.724Papio_anubis
ENSECAG00000017526MSI110085.083ENSPKIG00000016497MSI110085.083Paramormyrops_kingsleyae
ENSECAG00000017526MSI19685.879ENSPKIG00000023575-10083.978Paramormyrops_kingsleyae
ENSECAG00000017526MSI19892.105ENSPSIG00000011608-9392.128Pelodiscus_sinensis
ENSECAG00000017526MSI18092.576ENSPSIG00000009621-10092.576Pelodiscus_sinensis
ENSECAG00000017526MSI19470.640ENSPMGG00000007743-9073.964Periophthalmus_magnuspinnatus
ENSECAG00000017526MSI19481.763ENSPMGG00000000514MSI19786.774Periophthalmus_magnuspinnatus
ENSECAG00000017526MSI19994.958ENSPEMG00000010491Msi19994.958Peromyscus_maniculatus_bairdii
ENSECAG00000017526MSI110084.254ENSPFOG00000013113MSI110084.254Poecilia_formosa
ENSECAG00000017526MSI110083.791ENSPFOG00000008319-8683.791Poecilia_formosa
ENSECAG00000017526MSI110083.791ENSPLAG00000012431-9783.791Poecilia_latipinna
ENSECAG00000017526MSI110084.254ENSPLAG00000014025-10084.254Poecilia_latipinna
ENSECAG00000017526MSI110083.242ENSPMEG00000007025-9980.000Poecilia_mexicana
ENSECAG00000017526MSI110084.254ENSPMEG00000012796MSI110084.254Poecilia_mexicana
ENSECAG00000017526MSI19878.249ENSPREG00000021416-9483.939Poecilia_reticulata
ENSECAG00000017526MSI16278.571ENSPREG00000014574-10085.854Poecilia_reticulata
ENSECAG00000017526MSI110099.171ENSPPYG00000005027MSI110099.171Pongo_abelii
ENSECAG00000017526MSI19876.923ENSPCAG00000002300MSI110076.923Procavia_capensis
ENSECAG00000017526MSI1100100.000ENSPCOG00000017341MSI1100100.000Propithecus_coquereli
ENSECAG00000017526MSI19882.927ENSPVAG00000002225MSI110082.927Pteropus_vampyrus
ENSECAG00000017526MSI110083.978ENSPNYG00000002529-10083.978Pundamilia_nyererei
ENSECAG00000017526MSI110083.242ENSPNYG00000004379MSI110083.242Pundamilia_nyererei
ENSECAG00000017526MSI110082.597ENSPNAG00000019337msi110082.597Pygocentrus_nattereri
ENSECAG00000017526MSI19499.678ENSRNOG00000001156Msi110099.678Rattus_norvegicus
ENSECAG00000017526MSI194100.000ENSRBIG00000036889MSI1100100.000Rhinopithecus_bieti
ENSECAG00000017526MSI19499.697ENSRROG00000041076MSI19399.697Rhinopithecus_roxellana
ENSECAG00000017526MSI198100.000ENSSBOG00000030259MSI110099.713Saimiri_boliviensis_boliviensis
ENSECAG00000017526MSI19487.255ENSSHAG00000006834MSI110087.255Sarcophilus_harrisii
ENSECAG00000017526MSI19886.842ENSSFOG00015014964-9785.429Scleropages_formosus
ENSECAG00000017526MSI19488.012ENSSFOG00015005350MSI110088.820Scleropages_formosus
ENSECAG00000017526MSI19881.763ENSSMAG00000018824MSI19786.774Scophthalmus_maximus
ENSECAG00000017526MSI19485.818ENSSMAG00000009156-7185.818Scophthalmus_maximus
ENSECAG00000017526MSI110084.254ENSSDUG00000001027MSI110084.254Seriola_dumerili
ENSECAG00000017526MSI110083.516ENSSDUG00000022697-9787.220Seriola_dumerili
ENSECAG00000017526MSI19880.967ENSSLDG00000018706-9787.220Seriola_lalandi_dorsalis
ENSECAG00000017526MSI110084.254ENSSLDG00000016832MSI110084.254Seriola_lalandi_dorsalis
ENSECAG00000017526MSI110095.028ENSSPUG00000015741MSI110095.614Sphenodon_punctatus
ENSECAG00000017526MSI15274.375ENSSPAG00000015573zgc:1107968274.375Stegastes_partitus
ENSECAG00000017526MSI19886.217ENSSPAG00000013098-10086.217Stegastes_partitus
ENSECAG00000017526MSI16268.750ENSSPAG00000014085-10075.122Stegastes_partitus
ENSECAG00000017526MSI110099.724ENSSSCG00000029365MSI110099.724Sus_scrofa
ENSECAG00000017526MSI19896.784ENSTGUG00000009534MSI110096.784Taeniopygia_guttata
ENSECAG00000017526MSI19475.988ENSTRUG00000015636-7980.645Takifugu_rubripes
ENSECAG00000017526MSI18180.952ENSTRUG00000016249MSI110073.783Takifugu_rubripes
ENSECAG00000017526MSI19862.432ENSTNIG00000019814-9962.432Tetraodon_nigroviridis
ENSECAG00000017526MSI110079.178ENSTNIG00000011469MSI110079.178Tetraodon_nigroviridis
ENSECAG00000017526MSI19489.377ENSTBEG00000007182MSI110089.377Tupaia_belangeri
ENSECAG00000017526MSI19881.287ENSTTRG00000005663MSI110081.287Tursiops_truncatus
ENSECAG00000017526MSI16892.694ENSUAMG00000015514MSI19492.694Ursus_americanus
ENSECAG00000017526MSI19492.405ENSUMAG00000006176MSI19093.811Ursus_maritimus
ENSECAG00000017526MSI19899.099ENSVVUG00000020993MSI110099.099Vulpes_vulpes
ENSECAG00000017526MSI110091.209ENSXETG00000012216msi110091.257Xenopus_tropicalis
ENSECAG00000017526MSI19471.930ENSXCOG00000017605MSI19474.118Xiphophorus_couchianus
ENSECAG00000017526MSI110084.254ENSXMAG00000027103MSI110073.984Xiphophorus_maculatus
ENSECAG00000017526MSI110083.516ENSXMAG00000018237-10083.516Xiphophorus_maculatus

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