EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000017563 (Gene tree)
Gene ID: 100070684
Gene Symbol: XRCC6
Alias: -
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 25064 bases
Position: chr28:39195655-39220718
Accession: 25084
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000030051	SAP	PF02037.27	3.5e-09	1	1
ENSECAP00000015554	SAP	PF02037.27	4.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000035700	-	1982	-	ENSECAP00000030051	560 (aa)	XP_014592354	UPI000C9E37FF
ENSECAT00000019026	-	1929	-	ENSECAP00000015554	642 (aa)	XP_001500404	F6PNM7

Gene Model

Click here to download ENSECAG00000017563's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000017563's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000017563	XRCC6	99	86.275	ENSG00000196419	XRCC6	99	85.197	Homo_sapiens
ENSECAG00000017563	XRCC6	99	55.437	ENSAPOG00000012704	xrcc6	99	54.860	Acanthochromis_polyacanthus
ENSECAG00000017563	XRCC6	99	55.615	ENSACIG00000021277	xrcc6	99	55.354	Amphilophus_citrinellus
ENSECAG00000017563	XRCC6	99	54.982	ENSAOCG00000021344	xrcc6	99	54.441	Amphiprion_ocellaris
ENSECAG00000017563	XRCC6	99	55.338	ENSAPEG00000020712	xrcc6	99	54.770	Amphiprion_percula
ENSECAG00000017563	XRCC6	99	55.080	ENSATEG00000007119	xrcc6	99	54.695	Anabas_testudineus
ENSECAG00000017563	XRCC6	98	69.801	ENSAPLG00000004469	XRCC6	99	69.801	Anas_platyrhynchos
ENSECAG00000017563	XRCC6	99	74.336	ENSANAG00000023445	-	99	74.225	Aotus_nancymaae
ENSECAG00000017563	XRCC6	99	76.344	ENSANAG00000035230	-	99	75.537	Aotus_nancymaae
ENSECAG00000017563	XRCC6	99	86.275	ENSANAG00000018684	XRCC6	99	85.846	Aotus_nancymaae
ENSECAG00000017563	XRCC6	99	76.827	ENSANAG00000020017	-	99	75.618	Aotus_nancymaae
ENSECAG00000017563	XRCC6	99	55.437	ENSACLG00000018608	xrcc6	99	55.025	Astatotilapia_calliptera
ENSECAG00000017563	XRCC6	99	55.752	ENSAMXG00000007545	xrcc6	99	55.646	Astyanax_mexicanus
ENSECAG00000017563	XRCC6	99	86.275	ENSCJAG00000045512	XRCC6	99	85.362	Callithrix_jacchus
ENSECAG00000017563	XRCC6	100	86.501	ENSTSYG00000011348	XRCC6	100	85.902	Carlito_syrichta
ENSECAG00000017563	XRCC6	89	87.956	ENSCCAG00000030468	-	99	85.981	Cebus_capucinus
ENSECAG00000017563	XRCC6	99	82.703	ENSCCAG00000030041	-	95	80.757	Cebus_capucinus
ENSECAG00000017563	XRCC6	99	71.658	ENSCCAG00000037663	-	97	70.016	Cebus_capucinus
ENSECAG00000017563	XRCC6	99	67.023	ENSCCAG00000035711	-	99	67.599	Cebus_capucinus
ENSECAG00000017563	XRCC6	99	86.275	ENSCATG00000042366	XRCC6	98	86.528	Cercocebus_atys
ENSECAG00000017563	XRCC6	100	86.501	ENSCLAG00000016669	XRCC6	100	86.371	Chinchilla_lanigera
ENSECAG00000017563	XRCC6	99	86.275	ENSCSAG00000005784	XRCC6	99	85.197	Chlorocebus_sabaeus
ENSECAG00000017563	XRCC6	99	74.600	ENSCPBG00000020535	XRCC6	99	74.877	Chrysemys_picta_bellii
ENSECAG00000017563	XRCC6	99	34.446	ENSCING00000000633	-	96	34.242	Ciona_intestinalis
ENSECAG00000017563	XRCC6	99	86.275	ENSCANG00000031032	XRCC6	99	85.197	Colobus_angolensis_palliatus
ENSECAG00000017563	XRCC6	100	76.732	ENSCGRG00001019029	Xrcc6	100	76.519	Cricetulus_griseus_chok1gshd
ENSECAG00000017563	XRCC6	100	84.902	ENSCGRG00000001528	Xrcc6	100	84.072	Cricetulus_griseus_crigri
ENSECAG00000017563	XRCC6	99	56.283	ENSCSEG00000020434	xrcc6	99	55.646	Cynoglossus_semilaevis
ENSECAG00000017563	XRCC6	99	56.406	ENSCVAG00000002189	xrcc6	99	55.921	Cyprinodon_variegatus
ENSECAG00000017563	XRCC6	99	57.042	ENSDARG00000071551	xrcc6	100	56.515	Danio_rerio
ENSECAG00000017563	XRCC6	74	83.077	ENSETEG00000015333	-	78	84.615	Echinops_telfairi
ENSECAG00000017563	XRCC6	100	98.750	ENSEASG00005001514	XRCC6	100	98.845	Equus_asinus_asinus
ENSECAG00000017563	XRCC6	99	54.513	ENSELUG00000020301	xrcc6	99	53.846	Esox_lucius
ENSECAG00000017563	XRCC6	99	72.371	ENSFALG00000011908	XRCC6	97	70.732	Ficedula_albicollis
ENSECAG00000017563	XRCC6	99	56.460	ENSFHEG00000016833	xrcc6	99	56.137	Fundulus_heteroclitus
ENSECAG00000017563	XRCC6	99	49.020	ENSGMOG00000013524	xrcc6	99	48.849	Gadus_morhua
ENSECAG00000017563	XRCC6	99	70.232	ENSGALG00000011932	XRCC6	99	68.903	Gallus_gallus
ENSECAG00000017563	XRCC6	99	55.221	ENSGAFG00000008130	xrcc6	99	54.828	Gambusia_affinis
ENSECAG00000017563	XRCC6	99	53.697	ENSGACG00000004868	xrcc6	100	53.150	Gasterosteus_aculeatus
ENSECAG00000017563	XRCC6	99	74.067	ENSGAGG00000017518	XRCC6	99	74.220	Gopherus_agassizii
ENSECAG00000017563	XRCC6	99	86.453	ENSGGOG00000015885	XRCC6	99	85.362	Gorilla_gorilla
ENSECAG00000017563	XRCC6	99	55.793	ENSHBUG00000023281	xrcc6	99	55.793	Haplochromis_burtoni
ENSECAG00000017563	XRCC6	100	84.547	ENSHGLG00000018078	XRCC6	100	83.415	Heterocephalus_glaber_female
ENSECAG00000017563	XRCC6	100	84.547	ENSHGLG00100011264	XRCC6	100	83.415	Heterocephalus_glaber_male
ENSECAG00000017563	XRCC6	99	54.189	ENSHCOG00000009821	xrcc6	99	53.542	Hippocampus_comes
ENSECAG00000017563	XRCC6	99	54.850	ENSIPUG00000000767	xrcc6	96	55.556	Ictalurus_punctatus
ENSECAG00000017563	XRCC6	100	90.053	ENSSTOG00000009490	XRCC6	100	90.148	Ictidomys_tridecemlineatus
ENSECAG00000017563	XRCC6	100	78.431	ENSJJAG00000017136	Xrcc6	100	79.736	Jaculus_jaculus
ENSECAG00000017563	XRCC6	99	56.050	ENSKMAG00000002141	xrcc6	99	55.592	Kryptolebias_marmoratus
ENSECAG00000017563	XRCC6	99	54.867	ENSLBEG00000002691	xrcc6	99	54.828	Labrus_bergylta
ENSECAG00000017563	XRCC6	89	57.843	ENSLOCG00000011533	xrcc6	99	57.843	Lepisosteus_oculatus
ENSECAG00000017563	XRCC6	99	86.275	ENSMFAG00000003352	XRCC6	99	85.197	Macaca_fascicularis
ENSECAG00000017563	XRCC6	99	86.275	ENSMMUG00000001856	XRCC6	99	85.197	Macaca_mulatta
ENSECAG00000017563	XRCC6	99	86.275	ENSMNEG00000035076	XRCC6	99	85.197	Macaca_nemestrina
ENSECAG00000017563	XRCC6	99	86.275	ENSMLEG00000019869	XRCC6	99	85.197	Mandrillus_leucophaeus
ENSECAG00000017563	XRCC6	99	54.707	ENSMAMG00000003368	xrcc6	99	54.023	Mastacembelus_armatus
ENSECAG00000017563	XRCC6	99	53.641	ENSMAMG00000003405	xrcc6	96	54.217	Mastacembelus_armatus
ENSECAG00000017563	XRCC6	99	55.615	ENSMZEG00005028080	xrcc6	99	55.189	Maylandia_zebra
ENSECAG00000017563	XRCC6	99	69.627	ENSMGAG00000012146	XRCC6	99	68.515	Meleagris_gallopavo
ENSECAG00000017563	XRCC6	99	85.409	ENSMAUG00000017340	Xrcc6	100	84.375	Mesocricetus_auratus
ENSECAG00000017563	XRCC6	99	84.848	ENSMOCG00000015717	Xrcc6	100	83.526	Microtus_ochrogaster
ENSECAG00000017563	XRCC6	99	53.737	ENSMMOG00000003536	xrcc6	99	52.796	Mola_mola
ENSECAG00000017563	XRCC6	99	56.684	ENSMALG00000013912	xrcc6	94	56.013	Monopterus_albus
ENSECAG00000017563	XRCC6	100	76.909	MGP_CAROLIEiJ_G0020067	Xrcc6	100	76.519	Mus_caroli
ENSECAG00000017563	XRCC6	100	83.126	ENSMUSG00000022471	Xrcc6	100	82.266	Mus_musculus
ENSECAG00000017563	XRCC6	100	81.883	MGP_PahariEiJ_G0020069	Xrcc6	100	81.117	Mus_pahari
ENSECAG00000017563	XRCC6	100	82.801	MGP_SPRETEiJ_G0020967	Xrcc6	99	82.990	Mus_spretus
ENSECAG00000017563	XRCC6	100	83.659	ENSNGAG00000013750	Xrcc6	100	82.923	Nannospalax_galili
ENSECAG00000017563	XRCC6	99	55.971	ENSNBRG00000004125	xrcc6	99	55.519	Neolamprologus_brichardi
ENSECAG00000017563	XRCC6	99	84.314	ENSOPRG00000002386	XRCC6	99	84.111	Ochotona_princeps
ENSECAG00000017563	XRCC6	100	83.837	ENSODEG00000015847	XRCC6	100	83.580	Octodon_degus
ENSECAG00000017563	XRCC6	99	55.654	ENSONIG00000019715	xrcc6	99	55.848	Oreochromis_niloticus
ENSECAG00000017563	XRCC6	73	78.935	ENSOANG00000011328	XRCC6	99	78.935	Ornithorhynchus_anatinus
ENSECAG00000017563	XRCC6	99	86.275	ENSOCUG00000006948	XRCC6	99	86.161	Oryctolagus_cuniculus
ENSECAG00000017563	XRCC6	99	54.417	ENSORLG00020007820	xrcc6	99	54.248	Oryzias_latipes_hni
ENSECAG00000017563	XRCC6	99	54.064	ENSORLG00015006406	xrcc6	99	53.922	Oryzias_latipes_hsok
ENSECAG00000017563	XRCC6	99	53.710	ENSOMEG00000008998	xrcc6	99	53.595	Oryzias_melastigma
ENSECAG00000017563	XRCC6	99	88.256	ENSOGAG00000008821	XRCC6	100	88.322	Otolemur_garnettii
ENSECAG00000017563	XRCC6	92	89.262	ENSPPAG00000037167	XRCC6	97	88.550	Pan_paniscus
ENSECAG00000017563	XRCC6	99	86.275	ENSPTRG00000022548	XRCC6	99	86.528	Pan_troglodytes
ENSECAG00000017563	XRCC6	99	86.275	ENSPTRG00000045824	XRCC6	99	86.528	Pan_troglodytes
ENSECAG00000017563	XRCC6	99	86.096	ENSPANG00000001252	XRCC6	99	86.356	Papio_anubis
ENSECAG00000017563	XRCC6	99	57.848	ENSPKIG00000003974	xrcc6	100	57.749	Paramormyrops_kingsleyae
ENSECAG00000017563	XRCC6	98	56.172	ENSPMGG00000014220	xrcc6	100	55.537	Periophthalmus_magnuspinnatus
ENSECAG00000017563	XRCC6	100	84.192	ENSPEMG00000023446	Xrcc6	100	83.415	Peromyscus_maniculatus_bairdii
ENSECAG00000017563	XRCC6	99	80.107	ENSPCIG00000026409	XRCC6	99	80.131	Phascolarctos_cinereus
ENSECAG00000017563	XRCC6	99	55.398	ENSPFOG00000017173	xrcc6	99	54.992	Poecilia_formosa
ENSECAG00000017563	XRCC6	99	55.044	ENSPLAG00000000562	xrcc6	99	54.664	Poecilia_latipinna
ENSECAG00000017563	XRCC6	99	55.398	ENSPMEG00000018478	xrcc6	99	55.155	Poecilia_mexicana
ENSECAG00000017563	XRCC6	99	55.732	ENSPREG00000020957	xrcc6	93	55.212	Poecilia_reticulata
ENSECAG00000017563	XRCC6	99	76.292	ENSPPYG00000011876	XRCC6	99	75.987	Pongo_abelii
ENSECAG00000017563	XRCC6	100	86.679	ENSPVAG00000001168	XRCC6	100	85.550	Pteropus_vampyrus
ENSECAG00000017563	XRCC6	99	55.437	ENSPNYG00000003815	xrcc6	99	52.351	Pundamilia_nyererei
ENSECAG00000017563	XRCC6	100	82.771	ENSRNOG00000006392	Xrcc6	100	81.773	Rattus_norvegicus
ENSECAG00000017563	XRCC6	99	79.679	ENSRBIG00000039794	XRCC6	99	79.112	Rhinopithecus_bieti
ENSECAG00000017563	XRCC6	99	86.275	ENSRROG00000030297	XRCC6	99	85.197	Rhinopithecus_roxellana
ENSECAG00000017563	XRCC6	72	73.399	ENSSBOG00000024724	-	99	73.399	Saimiri_boliviensis_boliviensis
ENSECAG00000017563	XRCC6	99	79.396	ENSSHAG00000010790	XRCC6	99	79.803	Sarcophilus_harrisii
ENSECAG00000017563	XRCC6	99	58.907	ENSSFOG00015014409	xrcc6	100	58.564	Scleropages_formosus
ENSECAG00000017563	XRCC6	99	55.971	ENSSMAG00000006496	xrcc6	99	55.848	Scophthalmus_maximus
ENSECAG00000017563	XRCC6	99	56.007	ENSSDUG00000007542	xrcc6	99	55.719	Seriola_dumerili
ENSECAG00000017563	XRCC6	99	54.867	ENSSLDG00000009974	xrcc6	99	54.664	Seriola_lalandi_dorsalis
ENSECAG00000017563	XRCC6	99	74.600	ENSSPUG00000012086	XRCC6	99	74.877	Sphenodon_punctatus
ENSECAG00000017563	XRCC6	99	55.575	ENSSPAG00000015199	xrcc6	99	54.992	Stegastes_partitus
ENSECAG00000017563	XRCC6	99	71.530	ENSTGUG00000009852	-	95	71.897	Taeniopygia_guttata
ENSECAG00000017563	XRCC6	99	53.832	ENSTRUG00000017070	xrcc6	99	53.542	Takifugu_rubripes
ENSECAG00000017563	XRCC6	99	54.754	ENSTNIG00000012947	xrcc6	98	55.290	Tetraodon_nigroviridis
ENSECAG00000017563	XRCC6	99	79.715	ENSTBEG00000011736	XRCC6	99	79.828	Tupaia_belangeri
ENSECAG00000017563	XRCC6	99	71.708	ENSTTRG00000006749	XRCC6	99	72.697	Tursiops_truncatus
ENSECAG00000017563	XRCC6	99	55.398	ENSXMAG00000009691	xrcc6	99	55.155	Xiphophorus_maculatus