EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000017659 (Gene tree)
Gene ID: 100069172
Gene Symbol: LSG1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 30914 bases
Position: chr19:33939025-33969938
Accession: 19814
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000015638	MMR_HSR1	PF01926.23	4.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000019119	-	2715	-	ENSECAP00000015638	659 (aa)	XP_014588312	F6RZL9

Gene Model

Click here to download ENSECAG00000017659's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000017659's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000017659	LSG1	100	86.039	ENSG00000041802	LSG1	98	91.379	Homo_sapiens
ENSECAG00000017659	LSG1	99	64.145	ENSAPOG00000009694	lsg1	99	63.473	Acanthochromis_polyacanthus
ENSECAG00000017659	LSG1	99	84.219	ENSAMEG00000009343	LSG1	99	84.219	Ailuropoda_melanoleuca
ENSECAG00000017659	LSG1	98	64.506	ENSACIG00000012406	lsg1	99	64.599	Amphilophus_citrinellus
ENSECAG00000017659	LSG1	99	63.389	ENSAOCG00000016066	lsg1	99	63.843	Amphiprion_ocellaris
ENSECAG00000017659	LSG1	99	63.994	ENSAPEG00000003252	lsg1	99	64.145	Amphiprion_percula
ENSECAG00000017659	LSG1	98	66.049	ENSATEG00000011794	lsg1	99	64.555	Anabas_testudineus
ENSECAG00000017659	LSG1	95	65.610	ENSACAG00000004222	LSG1	99	64.873	Anolis_carolinensis
ENSECAG00000017659	LSG1	100	87.102	ENSANAG00000021153	LSG1	100	87.102	Aotus_nancymaae
ENSECAG00000017659	LSG1	99	63.378	ENSACLG00000000520	lsg1	99	62.261	Astatotilapia_calliptera
ENSECAG00000017659	LSG1	99	63.118	ENSAMXG00000008271	lsg1	99	63.268	Astyanax_mexicanus
ENSECAG00000017659	LSG1	100	84.522	ENSBTAG00000008461	LSG1	100	85.736	Bos_taurus
ENSECAG00000017659	LSG1	62	49.746	WBGene00016907	C53H9.2	89	49.746	Caenorhabditis_elegans
ENSECAG00000017659	LSG1	100	86.798	ENSCJAG00000013962	LSG1	100	86.798	Callithrix_jacchus
ENSECAG00000017659	LSG1	95	85.760	ENSCAFG00000013445	LSG1	99	85.760	Canis_familiaris
ENSECAG00000017659	LSG1	99	84.418	ENSCAFG00020002216	LSG1	99	85.554	Canis_lupus_dingo
ENSECAG00000017659	LSG1	99	84.802	ENSCHIG00000015769	LSG1	99	84.802	Capra_hircus
ENSECAG00000017659	LSG1	100	86.950	ENSTSYG00000001447	LSG1	100	86.950	Carlito_syrichta
ENSECAG00000017659	LSG1	95	77.107	ENSCAPG00000009856	LSG1	100	75.835	Cavia_aperea
ENSECAG00000017659	LSG1	100	85.888	ENSCCAG00000035744	LSG1	100	85.888	Cebus_capucinus
ENSECAG00000017659	LSG1	100	86.798	ENSCATG00000042060	LSG1	100	84.977	Cercocebus_atys
ENSECAG00000017659	LSG1	100	87.253	ENSCSAG00000008796	LSG1	92	87.253	Chlorocebus_sabaeus
ENSECAG00000017659	LSG1	99	70.348	ENSCPBG00000015941	LSG1	83	70.348	Chrysemys_picta_bellii
ENSECAG00000017659	LSG1	72	63.684	ENSCING00000007079	-	99	63.684	Ciona_intestinalis
ENSECAG00000017659	LSG1	67	63.265	ENSCSAVG00000002514	-	89	63.265	Ciona_savignyi
ENSECAG00000017659	LSG1	100	86.495	ENSCANG00000030709	LSG1	100	86.495	Colobus_angolensis_palliatus
ENSECAG00000017659	LSG1	100	84.091	ENSCGRG00001019846	Lsg1	100	84.091	Cricetulus_griseus_chok1gshd
ENSECAG00000017659	LSG1	100	84.091	ENSCGRG00000014617	Lsg1	100	84.091	Cricetulus_griseus_crigri
ENSECAG00000017659	LSG1	98	63.846	ENSCSEG00000008522	lsg1	99	62.930	Cynoglossus_semilaevis
ENSECAG00000017659	LSG1	97	65.741	ENSCVAG00000002484	lsg1	99	65.564	Cyprinodon_variegatus
ENSECAG00000017659	LSG1	99	66.616	ENSDARG00000015352	lsg1	99	66.465	Danio_rerio
ENSECAG00000017659	LSG1	100	86.103	ENSDNOG00000006224	LSG1	100	85.801	Dasypus_novemcinctus
ENSECAG00000017659	LSG1	84	58.264	FBgn0266284	Ns3	93	56.078	Drosophila_melanogaster
ENSECAG00000017659	LSG1	88	88.000	ENSETEG00000003888	LSG1	89	88.000	Echinops_telfairi
ENSECAG00000017659	LSG1	88	56.879	ENSEBUG00000003119	lsg1	85	56.260	Eptatretus_burgeri
ENSECAG00000017659	LSG1	100	98.938	ENSEASG00005000678	LSG1	100	98.938	Equus_asinus_asinus
ENSECAG00000017659	LSG1	87	84.483	ENSEEUG00000015217	LSG1	87	84.483	Erinaceus_europaeus
ENSECAG00000017659	LSG1	99	61.480	ENSELUG00000023973	lsg1	99	61.631	Esox_lucius
ENSECAG00000017659	LSG1	99	88.754	ENSFCAG00000024957	LSG1	99	88.754	Felis_catus
ENSECAG00000017659	LSG1	92	67.700	ENSFALG00000007210	LSG1	94	67.700	Ficedula_albicollis
ENSECAG00000017659	LSG1	100	78.765	ENSFDAG00000017373	LSG1	100	78.765	Fukomys_damarensis
ENSECAG00000017659	LSG1	97	63.919	ENSFHEG00000003680	lsg1	99	64.048	Fundulus_heteroclitus
ENSECAG00000017659	LSG1	81	71.849	ENSGMOG00000015834	lsg1	87	70.238	Gadus_morhua
ENSECAG00000017659	LSG1	99	65.658	ENSGALG00000007058	LSG1	87	65.356	Gallus_gallus
ENSECAG00000017659	LSG1	97	64.706	ENSGAFG00000015831	lsg1	99	64.134	Gambusia_affinis
ENSECAG00000017659	LSG1	98	63.318	ENSGACG00000009323	lsg1	99	63.024	Gasterosteus_aculeatus
ENSECAG00000017659	LSG1	100	86.495	ENSGGOG00000000520	LSG1	100	86.495	Gorilla_gorilla
ENSECAG00000017659	LSG1	99	63.528	ENSHBUG00000005659	lsg1	99	63.001	Haplochromis_burtoni
ENSECAG00000017659	LSG1	100	76.692	ENSHGLG00000017390	LSG1	100	75.753	Heterocephalus_glaber_female
ENSECAG00000017659	LSG1	100	76.692	ENSHGLG00100018587	LSG1	100	75.753	Heterocephalus_glaber_male
ENSECAG00000017659	LSG1	97	63.003	ENSHCOG00000016848	lsg1	99	62.054	Hippocampus_comes
ENSECAG00000017659	LSG1	99	64.643	ENSIPUG00000008631	lsg1	99	64.795	Ictalurus_punctatus
ENSECAG00000017659	LSG1	81	79.681	ENSSTOG00000010234	LSG1	99	81.673	Ictidomys_tridecemlineatus
ENSECAG00000017659	LSG1	100	81.118	ENSJJAG00000015513	Lsg1	100	81.118	Jaculus_jaculus
ENSECAG00000017659	LSG1	98	63.003	ENSKMAG00000009681	lsg1	99	62.556	Kryptolebias_marmoratus
ENSECAG00000017659	LSG1	99	67.166	ENSLACG00000013399	LSG1	99	66.967	Latimeria_chalumnae
ENSECAG00000017659	LSG1	98	68.673	ENSLOCG00000004918	lsg1	99	67.625	Lepisosteus_oculatus
ENSECAG00000017659	LSG1	100	83.308	ENSLAFG00000012919	-	100	83.308	Loxodonta_africana
ENSECAG00000017659	LSG1	100	86.798	ENSMFAG00000039903	LSG1	100	84.977	Macaca_fascicularis
ENSECAG00000017659	LSG1	100	86.950	ENSMMUG00000010708	LSG1	100	86.950	Macaca_mulatta
ENSECAG00000017659	LSG1	100	86.798	ENSMNEG00000031538	LSG1	100	84.825	Macaca_nemestrina
ENSECAG00000017659	LSG1	100	86.798	ENSMLEG00000041184	LSG1	100	86.798	Mandrillus_leucophaeus
ENSECAG00000017659	LSG1	99	63.238	ENSMAMG00000000470	lsg1	99	62.631	Mastacembelus_armatus
ENSECAG00000017659	LSG1	99	63.677	ENSMZEG00005017865	lsg1	99	63.150	Maylandia_zebra
ENSECAG00000017659	LSG1	89	67.291	ENSMGAG00000007050	LSG1	99	66.951	Meleagris_gallopavo
ENSECAG00000017659	LSG1	96	78.370	ENSMAUG00000016976	Lsg1	98	78.370	Mesocricetus_auratus
ENSECAG00000017659	LSG1	100	85.736	ENSMICG00000049087	LSG1	100	85.736	Microcebus_murinus
ENSECAG00000017659	LSG1	100	81.571	ENSMOCG00000022136	Lsg1	100	81.448	Microtus_ochrogaster
ENSECAG00000017659	LSG1	83	73.510	ENSMMOG00000008884	lsg1	99	71.429	Mola_mola
ENSECAG00000017659	LSG1	99	58.126	ENSMODG00000019828	LSG1	99	58.220	Monodelphis_domestica
ENSECAG00000017659	LSG1	100	81.942	MGP_CAROLIEiJ_G0020648	Lsg1	100	81.942	Mus_caroli
ENSECAG00000017659	LSG1	100	82.246	ENSMUSG00000022538	Lsg1	100	82.246	Mus_musculus
ENSECAG00000017659	LSG1	98	82.126	MGP_PahariEiJ_G0016352	Lsg1	100	82.576	Mus_pahari
ENSECAG00000017659	LSG1	100	81.942	MGP_SPRETEiJ_G0021544	Lsg1	100	81.942	Mus_spretus
ENSECAG00000017659	LSG1	99	85.866	ENSMPUG00000003734	LSG1	99	85.866	Mustela_putorius_furo
ENSECAG00000017659	LSG1	99	88.012	ENSMLUG00000012548	LSG1	99	88.012	Myotis_lucifugus
ENSECAG00000017659	LSG1	100	81.184	ENSNGAG00000021872	Lsg1	100	81.184	Nannospalax_galili
ENSECAG00000017659	LSG1	100	87.253	ENSNLEG00000008293	LSG1	100	87.253	Nomascus_leucogenys
ENSECAG00000017659	LSG1	69	69.359	ENSMEUG00000009041	-	82	69.275	Notamacropus_eugenii
ENSECAG00000017659	LSG1	99	63.855	ENSONIG00000002635	lsg1	99	63.127	Oreochromis_niloticus
ENSECAG00000017659	LSG1	95	73.684	ENSOANG00000012742	LSG1	99	72.727	Ornithorhynchus_anatinus
ENSECAG00000017659	LSG1	100	86.039	ENSOCUG00000004817	LSG1	100	86.039	Oryctolagus_cuniculus
ENSECAG00000017659	LSG1	98	64.341	ENSORLG00000007695	lsg1	99	63.830	Oryzias_latipes
ENSECAG00000017659	LSG1	98	63.876	ENSORLG00020016286	lsg1	99	63.222	Oryzias_latipes_hni
ENSECAG00000017659	LSG1	98	64.031	ENSORLG00015012025	lsg1	99	63.982	Oryzias_latipes_hsok
ENSECAG00000017659	LSG1	98	63.003	ENSOMEG00000022379	lsg1	99	63.047	Oryzias_melastigma
ENSECAG00000017659	LSG1	100	85.520	ENSOGAG00000003475	LSG1	100	85.520	Otolemur_garnettii
ENSECAG00000017659	LSG1	99	84.522	ENSOARG00000020403	LSG1	99	83.915	Ovis_aries
ENSECAG00000017659	LSG1	100	86.039	ENSPPAG00000029271	LSG1	100	86.039	Pan_paniscus
ENSECAG00000017659	LSG1	99	87.218	ENSPPRG00000010281	LSG1	99	87.218	Panthera_pardus
ENSECAG00000017659	LSG1	99	88.450	ENSPTIG00000010789	LSG1	99	88.450	Panthera_tigris_altaica
ENSECAG00000017659	LSG1	100	85.888	ENSPTRG00000015760	LSG1	100	85.888	Pan_troglodytes
ENSECAG00000017659	LSG1	100	86.798	ENSPANG00000018249	LSG1	100	84.977	Papio_anubis
ENSECAG00000017659	LSG1	96	65.047	ENSPKIG00000002895	lsg1	100	63.378	Paramormyrops_kingsleyae
ENSECAG00000017659	LSG1	95	66.299	ENSPSIG00000009821	LSG1	99	65.669	Pelodiscus_sinensis
ENSECAG00000017659	LSG1	95	65.978	ENSPMGG00000000931	lsg1	99	65.660	Periophthalmus_magnuspinnatus
ENSECAG00000017659	LSG1	100	82.477	ENSPEMG00000012082	-	100	82.024	Peromyscus_maniculatus_bairdii
ENSECAG00000017659	LSG1	99	60.921	ENSPMAG00000007451	lsg1	99	60.593	Petromyzon_marinus
ENSECAG00000017659	LSG1	99	67.708	ENSPCIG00000013890	LSG1	82	67.708	Phascolarctos_cinereus
ENSECAG00000017659	LSG1	97	65.284	ENSPFOG00000021882	lsg1	99	65.367	Poecilia_formosa
ENSECAG00000017659	LSG1	97	64.363	ENSPLAG00000019536	lsg1	99	64.627	Poecilia_latipinna
ENSECAG00000017659	LSG1	97	64.472	ENSPMEG00000017281	lsg1	99	64.574	Poecilia_mexicana
ENSECAG00000017659	LSG1	97	55.167	ENSPREG00000006048	lsg1	99	55.178	Poecilia_reticulata
ENSECAG00000017659	LSG1	92	85.362	ENSPPYG00000014425	LSG1	100	84.211	Pongo_abelii
ENSECAG00000017659	LSG1	90	86.667	ENSPCAG00000005511	LSG1	90	86.667	Procavia_capensis
ENSECAG00000017659	LSG1	100	87.102	ENSPCOG00000012360	LSG1	100	87.102	Propithecus_coquereli
ENSECAG00000017659	LSG1	99	63.229	ENSPNYG00000021994	lsg1	99	62.115	Pundamilia_nyererei
ENSECAG00000017659	LSG1	99	65.916	ENSPNAG00000015533	lsg1	99	65.507	Pygocentrus_nattereri
ENSECAG00000017659	LSG1	100	82.805	ENSRNOG00000001727	Lsg1	100	82.805	Rattus_norvegicus
ENSECAG00000017659	LSG1	100	86.343	ENSRBIG00000029053	LSG1	100	86.343	Rhinopithecus_bieti
ENSECAG00000017659	LSG1	100	86.343	ENSRROG00000037702	LSG1	100	86.343	Rhinopithecus_roxellana
ENSECAG00000017659	LSG1	70	48.458	YGL099W	LSG1	74	48.899	Saccharomyces_cerevisiae
ENSECAG00000017659	LSG1	100	86.950	ENSSBOG00000034938	LSG1	100	86.950	Saimiri_boliviensis_boliviensis
ENSECAG00000017659	LSG1	78	66.479	ENSSHAG00000003487	LSG1	99	65.234	Sarcophilus_harrisii
ENSECAG00000017659	LSG1	98	64.861	ENSSFOG00015008955	lsg1	99	64.804	Scleropages_formosus
ENSECAG00000017659	LSG1	98	64.787	ENSSDUG00000004622	lsg1	99	64.286	Seriola_dumerili
ENSECAG00000017659	LSG1	98	64.769	ENSSLDG00000010869	lsg1	99	64.947	Seriola_lalandi_dorsalis
ENSECAG00000017659	LSG1	81	83.284	ENSSARG00000012981	LSG1	81	83.284	Sorex_araneus
ENSECAG00000017659	LSG1	99	68.955	ENSSPUG00000016347	LSG1	99	68.507	Sphenodon_punctatus
ENSECAG00000017659	LSG1	99	63.086	ENSSPAG00000005508	lsg1	99	63.389	Stegastes_partitus
ENSECAG00000017659	LSG1	99	85.106	ENSSSCG00000011827	LSG1	99	84.498	Sus_scrofa
ENSECAG00000017659	LSG1	89	66.387	ENSTGUG00000009068	LSG1	99	65.546	Taeniopygia_guttata
ENSECAG00000017659	LSG1	97	60.896	ENSTRUG00000017380	lsg1	99	60.000	Takifugu_rubripes
ENSECAG00000017659	LSG1	97	64.241	ENSTNIG00000015570	lsg1	99	64.318	Tetraodon_nigroviridis
ENSECAG00000017659	LSG1	99	79.059	ENSTTRG00000000559	LSG1	99	78.149	Tursiops_truncatus
ENSECAG00000017659	LSG1	99	85.258	ENSUAMG00000012454	LSG1	99	85.258	Ursus_americanus
ENSECAG00000017659	LSG1	99	85.258	ENSUMAG00000000855	LSG1	99	85.258	Ursus_maritimus
ENSECAG00000017659	LSG1	95	82.400	ENSVPAG00000012400	LSG1	99	82.080	Vicugna_pacos
ENSECAG00000017659	LSG1	95	84.960	ENSVVUG00000008956	LSG1	97	84.960	Vulpes_vulpes
ENSECAG00000017659	LSG1	99	65.569	ENSXETG00000003451	lsg1	99	65.544	Xenopus_tropicalis
ENSECAG00000017659	LSG1	97	64.417	ENSXCOG00000003239	lsg1	99	64.275	Xiphophorus_couchianus
ENSECAG00000017659	LSG1	97	64.075	ENSXMAG00000005536	lsg1	99	63.783	Xiphophorus_maculatus