EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000017870 (Gene tree)
Gene ID: 100050553
Gene Symbol: RBM12B
Alias: -
Full Name: Equus caballus RNA binding motif protein 12B (RBM12B)%2C mRNA.
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 2931 bases
Position: chr9:41936651-41939581
Accession: NM_001256920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000015430	RRM_1	PF00076.22	4.2e-27	1	2
ENSECAP00000015430	RRM_1	PF00076.22	4.2e-27	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000018889	-	2931	-	ENSECAP00000015430	976 (aa)	XP_005613243	F6RBD1

Gene Model

Click here to download ENSECAG00000017870's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000017870's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000017870	RBM12B	52	72.414	ENSECAG00000021997	RBM12	55	72.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000017870	RBM12B	100	86.214	ENSG00000183808	RBM12B	100	100.000	Homo_sapiens
ENSECAG00000017870	RBM12B	64	37.624	ENSAPOG00000013963	rbm12b	96	37.624	Acanthochromis_polyacanthus
ENSECAG00000017870	RBM12B	100	83.690	ENSAMEG00000007134	RBM12B	100	80.246	Ailuropoda_melanoleuca
ENSECAG00000017870	RBM12B	50	40.452	ENSACIG00000014943	rbm12b	99	40.881	Amphilophus_citrinellus
ENSECAG00000017870	RBM12B	64	38.889	ENSAOCG00000024270	rbm12b	96	38.889	Amphiprion_ocellaris
ENSECAG00000017870	RBM12B	62	42.435	ENSAPEG00000022079	rbm12b	98	40.498	Amphiprion_percula
ENSECAG00000017870	RBM12B	57	45.455	ENSATEG00000004578	rbm12b	87	45.455	Anabas_testudineus
ENSECAG00000017870	RBM12B	75	60.667	ENSAPLG00000002020	RBM12B	100	60.667	Anas_platyrhynchos
ENSECAG00000017870	RBM12B	100	38.151	ENSACAG00000003463	RBM12B	100	38.227	Anolis_carolinensis
ENSECAG00000017870	RBM12B	100	83.128	ENSANAG00000034015	RBM12B	98	84.505	Aotus_nancymaae
ENSECAG00000017870	RBM12B	58	46.753	ENSACLG00000005575	rbm12b	84	46.753	Astatotilapia_calliptera
ENSECAG00000017870	RBM12B	55	46.753	ENSACLG00000005578	rbm12b	82	46.753	Astatotilapia_calliptera
ENSECAG00000017870	RBM12B	58	44.156	ENSAMXG00000041973	rbm12b	87	44.156	Astyanax_mexicanus
ENSECAG00000017870	RBM12B	100	83.203	ENSBTAG00000013408	RBM12B	100	81.167	Bos_taurus
ENSECAG00000017870	RBM12B	100	89.839	ENSCAFG00000009109	RBM12B	100	90.040	Canis_familiaris
ENSECAG00000017870	RBM12B	100	85.752	ENSCAFG00020012203	RBM12B	100	82.293	Canis_lupus_dingo
ENSECAG00000017870	RBM12B	88	89.024	ENSCHIG00000006790	RBM12B	88	89.024	Capra_hircus
ENSECAG00000017870	RBM12B	100	85.585	ENSTSYG00000012515	RBM12B	100	85.585	Carlito_syrichta
ENSECAG00000017870	RBM12B	100	82.190	ENSCAPG00000003543	RBM12B	100	82.618	Cavia_aperea
ENSECAG00000017870	RBM12B	100	82.190	ENSCPOG00000007815	RBM12B	100	82.618	Cavia_porcellus
ENSECAG00000017870	RBM12B	100	83.383	ENSCATG00000030769	RBM12B	100	79.222	Cercocebus_atys
ENSECAG00000017870	RBM12B	100	82.012	ENSCLAG00000017617	RBM12B	100	82.924	Chinchilla_lanigera
ENSECAG00000017870	RBM12B	100	86.513	ENSCSAG00000018559	RBM12B	100	86.513	Chlorocebus_sabaeus
ENSECAG00000017870	RBM12B	99	84.870	ENSCHOG00000008934	RBM12B	100	85.082	Choloepus_hoffmanni
ENSECAG00000017870	RBM12B	73	60.140	ENSCPBG00000003061	RBM12B	100	60.140	Chrysemys_picta_bellii
ENSECAG00000017870	RBM12B	100	83.432	ENSCANG00000030379	RBM12B	100	79.141	Colobus_angolensis_palliatus
ENSECAG00000017870	RBM12B	100	74.150	ENSCGRG00001008710	-	97	68.884	Cricetulus_griseus_chok1gshd
ENSECAG00000017870	RBM12B	66	40.040	ENSCSEG00000004610	rbm12b	89	40.040	Cynoglossus_semilaevis
ENSECAG00000017870	RBM12B	57	48.052	ENSCVAG00000011047	rbm12b	86	48.052	Cyprinodon_variegatus
ENSECAG00000017870	RBM12B	58	41.558	ENSDARG00000079717	rbm12b	81	41.558	Danio_rerio
ENSECAG00000017870	RBM12B	100	84.950	ENSDNOG00000041608	RBM12B	100	82.515	Dasypus_novemcinctus
ENSECAG00000017870	RBM12B	100	77.073	ENSDORG00000024034	-	100	79.529	Dipodomys_ordii
ENSECAG00000017870	RBM12B	69	73.836	ENSETEG00000013005	-	87	72.079	Echinops_telfairi
ENSECAG00000017870	RBM12B	100	87.887	ENSEASG00005016297	RBM12B	100	88.627	Equus_asinus_asinus
ENSECAG00000017870	RBM12B	100	85.848	ENSFCAG00000029274	RBM12B	100	85.848	Felis_catus
ENSECAG00000017870	RBM12B	75	57.333	ENSFALG00000014893	RBM12B	100	57.333	Ficedula_albicollis
ENSECAG00000017870	RBM12B	100	81.288	ENSFDAG00000005576	RBM12B	97	82.004	Fukomys_damarensis
ENSECAG00000017870	RBM12B	58	48.052	ENSFHEG00000016425	rbm12b	86	48.052	Fundulus_heteroclitus
ENSECAG00000017870	RBM12B	57	45.333	ENSGMOG00000013467	rbm12b	86	45.333	Gadus_morhua
ENSECAG00000017870	RBM12B	75	58.667	ENSGALG00000035129	RBM12B	100	58.667	Gallus_gallus
ENSECAG00000017870	RBM12B	57	48.052	ENSGAFG00000007224	rbm12b	86	48.052	Gambusia_affinis
ENSECAG00000017870	RBM12B	58	44.156	ENSGACG00000008682	rbm12b	85	44.156	Gasterosteus_aculeatus
ENSECAG00000017870	RBM12B	73	59.310	ENSGAGG00000009774	RBM12B	100	59.310	Gopherus_agassizii
ENSECAG00000017870	RBM12B	100	81.074	ENSGGOG00000011909	RBM12B	100	79.472	Gorilla_gorilla
ENSECAG00000017870	RBM12B	59	46.753	ENSHBUG00000016227	rbm12b	87	46.753	Haplochromis_burtoni
ENSECAG00000017870	RBM12B	100	82.437	ENSHGLG00000009063	RBM12B	100	82.175	Heterocephalus_glaber_female
ENSECAG00000017870	RBM12B	100	82.437	ENSHGLG00100021324	RBM12B	100	82.175	Heterocephalus_glaber_male
ENSECAG00000017870	RBM12B	57	50.649	ENSHCOG00000014952	rbm12b	90	50.649	Hippocampus_comes
ENSECAG00000017870	RBM12B	60	48.315	ENSIPUG00000001167	RBM12B	87	48.315	Ictalurus_punctatus
ENSECAG00000017870	RBM12B	100	82.830	ENSSTOG00000027445	RBM12B	100	82.830	Ictidomys_tridecemlineatus
ENSECAG00000017870	RBM12B	100	72.131	ENSJJAG00000004165	-	100	74.514	Jaculus_jaculus
ENSECAG00000017870	RBM12B	57	47.368	ENSKMAG00000013704	rbm12b	83	47.368	Kryptolebias_marmoratus
ENSECAG00000017870	RBM12B	57	47.368	ENSKMAG00000013715	rbm12b	86	47.368	Kryptolebias_marmoratus
ENSECAG00000017870	RBM12B	66	51.429	ENSLACG00000007177	RBM12B	99	51.429	Latimeria_chalumnae
ENSECAG00000017870	RBM12B	58	49.351	ENSLOCG00000018344	rbm12b	86	49.351	Lepisosteus_oculatus
ENSECAG00000017870	RBM12B	100	78.164	ENSLAFG00000029949	RBM12B	100	72.904	Loxodonta_africana
ENSECAG00000017870	RBM12B	100	83.728	ENSMFAG00000045430	RBM12B	100	79.346	Macaca_fascicularis
ENSECAG00000017870	RBM12B	100	86.513	ENSMMUG00000005558	RBM12B	100	86.513	Macaca_mulatta
ENSECAG00000017870	RBM12B	100	83.728	ENSMNEG00000041292	RBM12B	100	79.346	Macaca_nemestrina
ENSECAG00000017870	RBM12B	100	82.940	ENSMLEG00000037288	RBM12B	100	79.878	Mandrillus_leucophaeus
ENSECAG00000017870	RBM12B	59	49.351	ENSMAMG00000011998	rbm12b	86	49.351	Mastacembelus_armatus
ENSECAG00000017870	RBM12B	58	46.753	ENSMZEG00005014845	rbm12b	85	45.946	Maylandia_zebra
ENSECAG00000017870	RBM12B	58	46.753	ENSMZEG00005015005	rbm12b	86	46.753	Maylandia_zebra
ENSECAG00000017870	RBM12B	50	58.708	ENSMGAG00000011985	RBM12B	99	59.295	Meleagris_gallopavo
ENSECAG00000017870	RBM12B	100	74.966	ENSMAUG00000021752	-	100	74.966	Mesocricetus_auratus
ENSECAG00000017870	RBM12B	100	84.890	ENSMICG00000036969	RBM12B	100	76.561	Microcebus_murinus
ENSECAG00000017870	RBM12B	100	73.859	ENSMOCG00000005603	-	100	73.859	Microtus_ochrogaster
ENSECAG00000017870	RBM12B	57	47.368	ENSMMOG00000002404	rbm12b	94	47.368	Mola_mola
ENSECAG00000017870	RBM12B	97	68.326	ENSMODG00000007436	RBM12B	98	68.326	Monodelphis_domestica
ENSECAG00000017870	RBM12B	59	48.718	ENSMALG00000012059	rbm12b	88	48.718	Monopterus_albus
ENSECAG00000017870	RBM12B	100	64.045	ENSMUSG00000052137	Rbm12b2	100	64.964	Mus_musculus
ENSECAG00000017870	RBM12B	100	73.003	ENSMUSG00000046667	Rbm12b1	100	71.429	Mus_musculus
ENSECAG00000017870	RBM12B	100	72.865	MGP_SPRETEiJ_G0026766	-	100	72.268	Mus_spretus
ENSECAG00000017870	RBM12B	100	67.210	MGP_SPRETEiJ_G0026765	-	100	68.566	Mus_spretus
ENSECAG00000017870	RBM12B	100	90.220	ENSMPUG00000018637	RBM12B	100	89.920	Mustela_putorius_furo
ENSECAG00000017870	RBM12B	100	79.738	ENSMLUG00000002359	RBM12B	100	81.288	Myotis_lucifugus
ENSECAG00000017870	RBM12B	100	75.025	ENSNGAG00000002801	-	100	78.834	Nannospalax_galili
ENSECAG00000017870	RBM12B	58	46.753	ENSNBRG00000015057	rbm12b	86	46.753	Neolamprologus_brichardi
ENSECAG00000017870	RBM12B	100	81.877	ENSNLEG00000032050	RBM12B	100	80.589	Nomascus_leucogenys
ENSECAG00000017870	RBM12B	100	80.793	ENSODEG00000019204	RBM12B	100	80.996	Octodon_degus
ENSECAG00000017870	RBM12B	58	46.753	ENSONIG00000020612	rbm12b	86	46.753	Oreochromis_niloticus
ENSECAG00000017870	RBM12B	77	62.921	ENSOANG00000015735	-	97	62.921	Ornithorhynchus_anatinus
ENSECAG00000017870	RBM12B	100	79.129	ENSOCUG00000010353	RBM12B	100	78.710	Oryctolagus_cuniculus
ENSECAG00000017870	RBM12B	57	49.351	ENSORLG00000008228	rbm12b	83	49.351	Oryzias_latipes
ENSECAG00000017870	RBM12B	57	49.351	ENSORLG00020013619	rbm12b	83	49.351	Oryzias_latipes_hni
ENSECAG00000017870	RBM12B	57	49.351	ENSORLG00015019999	rbm12b	83	49.351	Oryzias_latipes_hsok
ENSECAG00000017870	RBM12B	57	50.649	ENSOMEG00000022523	rbm12b	83	50.649	Oryzias_melastigma
ENSECAG00000017870	RBM12B	100	85.598	ENSOGAG00000002979	RBM12B	100	85.598	Otolemur_garnettii
ENSECAG00000017870	RBM12B	100	85.885	ENSPTIG00000020071	RBM12B	100	82.088	Panthera_tigris_altaica
ENSECAG00000017870	RBM12B	100	81.443	ENSPTRG00000020420	RBM12B	99	84.677	Pan_troglodytes
ENSECAG00000017870	RBM12B	100	83.071	ENSPANG00000035535	RBM12B	100	79.980	Papio_anubis
ENSECAG00000017870	RBM12B	58	46.753	ENSPKIG00000018719	rbm12b	85	46.753	Paramormyrops_kingsleyae
ENSECAG00000017870	RBM12B	73	58.503	ENSPSIG00000001348	RBM12B	100	58.503	Pelodiscus_sinensis
ENSECAG00000017870	RBM12B	100	67.963	ENSPEMG00000008279	-	100	75.989	Peromyscus_maniculatus_bairdii
ENSECAG00000017870	RBM12B	97	67.421	ENSPCIG00000008556	RBM12B	100	67.943	Phascolarctos_cinereus
ENSECAG00000017870	RBM12B	60	44.118	ENSPFOG00000020937	rbm12b	86	44.118	Poecilia_formosa
ENSECAG00000017870	RBM12B	60	44.118	ENSPLAG00000018782	rbm12b	89	44.118	Poecilia_latipinna
ENSECAG00000017870	RBM12B	60	43.564	ENSPMEG00000011418	rbm12b	89	43.564	Poecilia_mexicana
ENSECAG00000017870	RBM12B	60	43.564	ENSPREG00000020770	rbm12b	89	43.564	Poecilia_reticulata
ENSECAG00000017870	RBM12B	50	30.545	ENSPREG00000018608	zgc:153215	99	30.545	Poecilia_reticulata
ENSECAG00000017870	RBM12B	100	86.214	ENSPPYG00000018745	RBM12B	100	85.714	Pongo_abelii
ENSECAG00000017870	RBM12B	100	77.073	ENSPCOG00000023546	RBM12B	100	82.458	Propithecus_coquereli
ENSECAG00000017870	RBM12B	100	85.159	ENSPVAG00000011803	RBM12B	100	85.890	Pteropus_vampyrus
ENSECAG00000017870	RBM12B	58	46.753	ENSPNYG00000016696	rbm12b	86	46.753	Pundamilia_nyererei
ENSECAG00000017870	RBM12B	58	50.649	ENSPNAG00000008126	rbm12b	84	50.649	Pygocentrus_nattereri
ENSECAG00000017870	RBM12B	100	71.191	ENSRNOG00000016330	Rbm12b	100	63.951	Rattus_norvegicus
ENSECAG00000017870	RBM12B	90	71.074	ENSRNOG00000055292	LOC679087	100	62.061	Rattus_norvegicus
ENSECAG00000017870	RBM12B	100	83.443	ENSRBIG00000035046	RBM12B	100	77.620	Rhinopithecus_bieti
ENSECAG00000017870	RBM12B	100	73.490	ENSRROG00000023660	RBM12B	100	77.198	Rhinopithecus_roxellana
ENSECAG00000017870	RBM12B	100	81.354	ENSSBOG00000027592	RBM12B	100	79.776	Saimiri_boliviensis_boliviensis
ENSECAG00000017870	RBM12B	96	67.421	ENSSHAG00000015335	RBM12B	100	68.262	Sarcophilus_harrisii
ENSECAG00000017870	RBM12B	58	46.753	ENSSFOG00015001584	rbm12b	86	46.753	Scleropages_formosus
ENSECAG00000017870	RBM12B	58	48.052	ENSSMAG00000019708	rbm12b	86	48.052	Scophthalmus_maximus
ENSECAG00000017870	RBM12B	58	48.052	ENSSDUG00000006856	rbm12b	86	48.052	Seriola_dumerili
ENSECAG00000017870	RBM12B	58	48.052	ENSSLDG00000016156	rbm12b	86	48.052	Seriola_lalandi_dorsalis
ENSECAG00000017870	RBM12B	83	82.903	ENSSARG00000011845	-	84	82.903	Sorex_araneus
ENSECAG00000017870	RBM12B	50	56.673	ENSSPUG00000016954	RBM12B	91	56.673	Sphenodon_punctatus
ENSECAG00000017870	RBM12B	57	48.052	ENSSPAG00000006774	rbm12b	86	48.052	Stegastes_partitus
ENSECAG00000017870	RBM12B	100	90.974	ENSSSCG00000006110	RBM12B	100	90.974	Sus_scrofa
ENSECAG00000017870	RBM12B	52	57.198	ENSTGUG00000011860	RBM12B	100	57.198	Taeniopygia_guttata
ENSECAG00000017870	RBM12B	61	46.753	ENSTRUG00000013738	rbm12b	93	46.753	Takifugu_rubripes
ENSECAG00000017870	RBM12B	84	84.953	ENSTBEG00000000449	RBM12B	82	84.953	Tupaia_belangeri
ENSECAG00000017870	RBM12B	100	78.689	ENSUAMG00000023639	RBM12B	100	83.214	Ursus_americanus
ENSECAG00000017870	RBM12B	100	82.944	ENSUMAG00000016008	RBM12B	100	86.182	Ursus_maritimus
ENSECAG00000017870	RBM12B	88	95.189	ENSVPAG00000001080	RBM12B	90	95.189	Vicugna_pacos
ENSECAG00000017870	RBM12B	100	80.020	ENSVVUG00000002694	RBM12B	100	82.497	Vulpes_vulpes
ENSECAG00000017870	RBM12B	78	43.645	ENSXETG00000014694	rbm12b	100	47.023	Xenopus_tropicalis
ENSECAG00000017870	RBM12B	62	43.836	ENSXETG00000014696	rbm12b	90	38.614	Xenopus_tropicalis
ENSECAG00000017870	RBM12B	50	30.103	ENSXETG00000025920	-	97	30.103	Xenopus_tropicalis
ENSECAG00000017870	RBM12B	60	44.554	ENSXMAG00000014213	rbm12b	89	44.554	Xiphophorus_maculatus