EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000017994 (Gene tree)
Gene ID: 100051601
Gene Symbol: EDC3
Alias: -
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 38527 bases
Position: chr1:120200607-120239133
Accession: 17416
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000015628	FDF	PF09532.10	3.4e-18	1	1
ENSECAP00000015628	LSM14	PF12701.7	9.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000019108	-	2512	-	ENSECAP00000015628	508 (aa)	XP_005602979	F6S066

Gene Model

Click here to download ENSECAG00000017994's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000017994's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000017994	EDC3	100	97.638	ENSG00000179151	EDC3	100	100.000	Homo_sapiens
ENSECAG00000017994	EDC3	100	69.608	ENSAPOG00000010791	edc3	100	69.608	Acanthochromis_polyacanthus
ENSECAG00000017994	EDC3	100	55.922	ENSAPOG00000008655	EDC3	100	55.922	Acanthochromis_polyacanthus
ENSECAG00000017994	EDC3	100	97.441	ENSAMEG00000008963	EDC3	100	97.441	Ailuropoda_melanoleuca
ENSECAG00000017994	EDC3	100	68.369	ENSACIG00000017751	edc3	100	68.369	Amphilophus_citrinellus
ENSECAG00000017994	EDC3	99	60.039	ENSACIG00000005330	EDC3	99	60.039	Amphilophus_citrinellus
ENSECAG00000017994	EDC3	100	69.608	ENSAOCG00000005431	edc3	100	69.608	Amphiprion_ocellaris
ENSECAG00000017994	EDC3	100	58.721	ENSAOCG00000009103	-	100	58.721	Amphiprion_ocellaris
ENSECAG00000017994	EDC3	100	69.608	ENSAPEG00000000968	edc3	100	69.608	Amphiprion_percula
ENSECAG00000017994	EDC3	100	58.721	ENSAPEG00000007841	EDC3	100	58.721	Amphiprion_percula
ENSECAG00000017994	EDC3	100	57.692	ENSATEG00000004205	-	100	57.692	Anabas_testudineus
ENSECAG00000017994	EDC3	100	69.548	ENSATEG00000015505	edc3	100	69.548	Anabas_testudineus
ENSECAG00000017994	EDC3	90	87.473	ENSAPLG00000008957	EDC3	100	87.473	Anas_platyrhynchos
ENSECAG00000017994	EDC3	78	87.406	ENSACAG00000000460	-	100	87.406	Anolis_carolinensis
ENSECAG00000017994	EDC3	100	97.835	ENSANAG00000024078	EDC3	100	97.835	Aotus_nancymaae
ENSECAG00000017994	EDC3	100	67.387	ENSACLG00000007232	edc3	100	67.387	Astatotilapia_calliptera
ENSECAG00000017994	EDC3	99	58.480	ENSACLG00000018776	-	99	58.480	Astatotilapia_calliptera
ENSECAG00000017994	EDC3	100	70.703	ENSAMXG00000001589	edc3	100	70.703	Astyanax_mexicanus
ENSECAG00000017994	EDC3	100	96.850	ENSBTAG00000007308	EDC3	100	96.850	Bos_taurus
ENSECAG00000017994	EDC3	100	98.031	ENSCJAG00000017681	EDC3	100	98.031	Callithrix_jacchus
ENSECAG00000017994	EDC3	100	97.244	ENSCAFG00000017935	EDC3	100	97.244	Canis_familiaris
ENSECAG00000017994	EDC3	100	97.244	ENSCAFG00020003909	EDC3	100	97.244	Canis_lupus_dingo
ENSECAG00000017994	EDC3	100	97.047	ENSCHIG00000023658	EDC3	100	97.047	Capra_hircus
ENSECAG00000017994	EDC3	100	97.047	ENSTSYG00000004822	EDC3	100	97.047	Carlito_syrichta
ENSECAG00000017994	EDC3	100	95.669	ENSCPOG00000015595	EDC3	100	95.669	Cavia_porcellus
ENSECAG00000017994	EDC3	100	98.228	ENSCCAG00000021663	EDC3	100	98.228	Cebus_capucinus
ENSECAG00000017994	EDC3	100	97.835	ENSCATG00000037511	EDC3	100	97.835	Cercocebus_atys
ENSECAG00000017994	EDC3	100	95.472	ENSCLAG00000005700	EDC3	100	95.472	Chinchilla_lanigera
ENSECAG00000017994	EDC3	100	97.835	ENSCSAG00000014239	EDC3	100	97.835	Chlorocebus_sabaeus
ENSECAG00000017994	EDC3	100	89.173	ENSCPBG00000024239	EDC3	100	89.173	Chrysemys_picta_bellii
ENSECAG00000017994	EDC3	100	37.885	ENSCING00000022142	-	99	37.885	Ciona_intestinalis
ENSECAG00000017994	EDC3	100	97.835	ENSCANG00000028699	EDC3	100	97.835	Colobus_angolensis_palliatus
ENSECAG00000017994	EDC3	100	96.850	ENSCGRG00001013874	Edc3	100	96.850	Cricetulus_griseus_chok1gshd
ENSECAG00000017994	EDC3	100	96.850	ENSCGRG00000011885	Edc3	100	96.850	Cricetulus_griseus_crigri
ENSECAG00000017994	EDC3	99	69.291	ENSCSEG00000012996	edc3	99	69.291	Cynoglossus_semilaevis
ENSECAG00000017994	EDC3	100	68.824	ENSCVAG00000008023	edc3	100	68.824	Cyprinodon_variegatus
ENSECAG00000017994	EDC3	99	68.235	ENSDARG00000051931	edc3	99	68.616	Danio_rerio
ENSECAG00000017994	EDC3	100	85.659	ENSDNOG00000030661	EDC3	100	85.659	Dasypus_novemcinctus
ENSECAG00000017994	EDC3	64	98.148	ENSETEG00000002398	-	64	98.148	Echinops_telfairi
ENSECAG00000017994	EDC3	100	100.000	ENSEASG00005005071	EDC3	100	100.000	Equus_asinus_asinus
ENSECAG00000017994	EDC3	100	62.062	ENSELUG00000007607	EDC3	100	62.062	Esox_lucius
ENSECAG00000017994	EDC3	100	65.497	ENSELUG00000005794	edc3	100	65.497	Esox_lucius
ENSECAG00000017994	EDC3	100	96.457	ENSFCAG00000002014	EDC3	100	96.457	Felis_catus
ENSECAG00000017994	EDC3	98	84.569	ENSFALG00000004543	EDC3	96	84.569	Ficedula_albicollis
ENSECAG00000017994	EDC3	100	95.079	ENSFDAG00000012582	EDC3	100	95.079	Fukomys_damarensis
ENSECAG00000017994	EDC3	100	69.216	ENSFHEG00000009375	edc3	100	69.216	Fundulus_heteroclitus
ENSECAG00000017994	EDC3	100	67.836	ENSGMOG00000002715	edc3	100	67.773	Gadus_morhua
ENSECAG00000017994	EDC3	100	88.976	ENSGALG00000040181	EDC3	100	88.976	Gallus_gallus
ENSECAG00000017994	EDC3	100	67.387	ENSGAFG00000014433	edc3	100	67.451	Gambusia_affinis
ENSECAG00000017994	EDC3	100	68.369	ENSGACG00000009783	edc3	100	68.369	Gasterosteus_aculeatus
ENSECAG00000017994	EDC3	99	55.513	ENSGACG00000014671	EDC3	99	56.140	Gasterosteus_aculeatus
ENSECAG00000017994	EDC3	100	88.780	ENSGAGG00000023477	EDC3	100	88.780	Gopherus_agassizii
ENSECAG00000017994	EDC3	100	97.835	ENSGGOG00000003552	EDC3	100	97.835	Gorilla_gorilla
ENSECAG00000017994	EDC3	100	67.387	ENSHBUG00000003635	edc3	100	67.387	Haplochromis_burtoni
ENSECAG00000017994	EDC3	99	58.480	ENSHBUG00000020817	EDC3	99	58.480	Haplochromis_burtoni
ENSECAG00000017994	EDC3	100	66.536	ENSHCOG00000016834	edc3	100	67.710	Hippocampus_comes
ENSECAG00000017994	EDC3	99	69.863	ENSIPUG00000005695	edc3	100	69.863	Ictalurus_punctatus
ENSECAG00000017994	EDC3	100	97.638	ENSSTOG00000013936	EDC3	100	97.638	Ictidomys_tridecemlineatus
ENSECAG00000017994	EDC3	100	96.654	ENSJJAG00000008074	Edc3	100	96.654	Jaculus_jaculus
ENSECAG00000017994	EDC3	100	56.102	ENSKMAG00000001987	EDC3	100	56.102	Kryptolebias_marmoratus
ENSECAG00000017994	EDC3	100	68.762	ENSKMAG00000001243	edc3	100	68.762	Kryptolebias_marmoratus
ENSECAG00000017994	EDC3	100	58.527	ENSLBEG00000017984	EDC3	100	58.527	Labrus_bergylta
ENSECAG00000017994	EDC3	100	69.216	ENSLBEG00000013435	edc3	99	69.216	Labrus_bergylta
ENSECAG00000017994	EDC3	100	77.670	ENSLACG00000014149	EDC3	100	77.670	Latimeria_chalumnae
ENSECAG00000017994	EDC3	99	67.057	ENSLOCG00000014625	edc3	99	67.057	Lepisosteus_oculatus
ENSECAG00000017994	EDC3	100	96.063	ENSLAFG00000002992	EDC3	100	96.063	Loxodonta_africana
ENSECAG00000017994	EDC3	100	97.638	ENSMFAG00000043074	EDC3	100	97.638	Macaca_fascicularis
ENSECAG00000017994	EDC3	100	97.638	ENSMMUG00000011071	EDC3	100	97.638	Macaca_mulatta
ENSECAG00000017994	EDC3	100	97.638	ENSMNEG00000035316	EDC3	100	97.638	Macaca_nemestrina
ENSECAG00000017994	EDC3	100	97.835	ENSMLEG00000030372	EDC3	100	97.835	Mandrillus_leucophaeus
ENSECAG00000017994	EDC3	99	57.422	ENSMAMG00000005423	-	99	57.422	Mastacembelus_armatus
ENSECAG00000017994	EDC3	100	69.548	ENSMAMG00000000505	edc3	100	69.548	Mastacembelus_armatus
ENSECAG00000017994	EDC3	99	58.984	ENSMZEG00005005654	EDC3	99	58.984	Maylandia_zebra
ENSECAG00000017994	EDC3	100	67.387	ENSMZEG00005004892	edc3	100	67.387	Maylandia_zebra
ENSECAG00000017994	EDC3	100	87.992	ENSMGAG00000002617	EDC3	100	87.992	Meleagris_gallopavo
ENSECAG00000017994	EDC3	100	97.047	ENSMICG00000043190	EDC3	100	97.047	Microcebus_murinus
ENSECAG00000017994	EDC3	100	96.850	ENSMOCG00000016205	Edc3	100	96.850	Microtus_ochrogaster
ENSECAG00000017994	EDC3	99	68.762	ENSMMOG00000012278	edc3	99	68.762	Mola_mola
ENSECAG00000017994	EDC3	100	92.126	ENSMODG00000009442	EDC3	100	92.126	Monodelphis_domestica
ENSECAG00000017994	EDC3	100	69.548	ENSMALG00000008658	edc3	100	69.548	Monopterus_albus
ENSECAG00000017994	EDC3	100	96.260	MGP_CAROLIEiJ_G0032280	Edc3	100	98.462	Mus_caroli
ENSECAG00000017994	EDC3	100	95.866	ENSMUSG00000038957	Edc3	100	98.462	Mus_musculus
ENSECAG00000017994	EDC3	100	96.457	MGP_PahariEiJ_G0015146	Edc3	100	98.462	Mus_pahari
ENSECAG00000017994	EDC3	100	95.669	MGP_SPRETEiJ_G0033420	Edc3	100	98.462	Mus_spretus
ENSECAG00000017994	EDC3	100	96.260	ENSMPUG00000017293	EDC3	100	96.260	Mustela_putorius_furo
ENSECAG00000017994	EDC3	100	96.863	ENSMLUG00000016382	EDC3	100	96.863	Myotis_lucifugus
ENSECAG00000017994	EDC3	100	96.260	ENSNGAG00000010923	Edc3	100	96.260	Nannospalax_galili
ENSECAG00000017994	EDC3	100	67.780	ENSNBRG00000002434	edc3	100	67.780	Neolamprologus_brichardi
ENSECAG00000017994	EDC3	99	58.984	ENSNBRG00000007881	EDC3	99	58.984	Neolamprologus_brichardi
ENSECAG00000017994	EDC3	100	88.189	ENSNLEG00000014577	EDC3	100	88.189	Nomascus_leucogenys
ENSECAG00000017994	EDC3	100	91.339	ENSMEUG00000009077	EDC3	100	91.339	Notamacropus_eugenii
ENSECAG00000017994	EDC3	79	96.296	ENSOPRG00000009540	-	79	96.296	Ochotona_princeps
ENSECAG00000017994	EDC3	100	67.583	ENSONIG00000008434	edc3	100	67.583	Oreochromis_niloticus
ENSECAG00000017994	EDC3	99	60.234	ENSONIG00000002932	-	99	60.234	Oreochromis_niloticus
ENSECAG00000017994	EDC3	78	92.443	ENSOCUG00000017740	EDC3	86	92.443	Oryctolagus_cuniculus
ENSECAG00000017994	EDC3	100	57.031	ENSORLG00000014399	-	98	57.031	Oryzias_latipes
ENSECAG00000017994	EDC3	100	66.994	ENSORLG00000004883	edc3	100	66.994	Oryzias_latipes
ENSECAG00000017994	EDC3	100	67.387	ENSORLG00020012262	edc3	100	67.387	Oryzias_latipes_hni
ENSECAG00000017994	EDC3	100	57.031	ENSORLG00020019446	-	100	57.031	Oryzias_latipes_hni
ENSECAG00000017994	EDC3	100	67.188	ENSORLG00015005634	edc3	100	67.188	Oryzias_latipes_hsok
ENSECAG00000017994	EDC3	100	56.641	ENSORLG00015017635	-	96	56.641	Oryzias_latipes_hsok
ENSECAG00000017994	EDC3	100	57.227	ENSOMEG00000017354	EDC3	100	57.227	Oryzias_melastigma
ENSECAG00000017994	EDC3	100	68.627	ENSOMEG00000014026	edc3	100	68.627	Oryzias_melastigma
ENSECAG00000017994	EDC3	100	97.441	ENSOGAG00000014441	EDC3	100	97.441	Otolemur_garnettii
ENSECAG00000017994	EDC3	100	96.660	ENSOARG00000003476	EDC3	100	96.660	Ovis_aries
ENSECAG00000017994	EDC3	100	97.835	ENSPPAG00000040143	EDC3	100	97.835	Pan_paniscus
ENSECAG00000017994	EDC3	100	96.850	ENSPPRG00000006257	EDC3	100	96.850	Panthera_pardus
ENSECAG00000017994	EDC3	100	96.850	ENSPTIG00000017424	EDC3	100	96.850	Panthera_tigris_altaica
ENSECAG00000017994	EDC3	100	97.835	ENSPTRG00000007279	EDC3	100	97.835	Pan_troglodytes
ENSECAG00000017994	EDC3	100	97.835	ENSPANG00000015997	EDC3	100	97.835	Papio_anubis
ENSECAG00000017994	EDC3	100	66.211	ENSPKIG00000019810	EDC3	100	66.211	Paramormyrops_kingsleyae
ENSECAG00000017994	EDC3	100	67.969	ENSPKIG00000004416	edc3	100	69.141	Paramormyrops_kingsleyae
ENSECAG00000017994	EDC3	100	83.661	ENSPSIG00000008474	EDC3	100	83.661	Pelodiscus_sinensis
ENSECAG00000017994	EDC3	100	66.536	ENSPMGG00000007223	edc3	100	66.536	Periophthalmus_magnuspinnatus
ENSECAG00000017994	EDC3	100	96.457	ENSPEMG00000015260	Edc3	100	96.457	Peromyscus_maniculatus_bairdii
ENSECAG00000017994	EDC3	100	90.551	ENSPCIG00000006276	EDC3	70	90.730	Phascolarctos_cinereus
ENSECAG00000017994	EDC3	100	68.288	ENSPFOG00000012204	edc3	100	68.288	Poecilia_formosa
ENSECAG00000017994	EDC3	100	68.288	ENSPLAG00000014420	edc3	100	68.288	Poecilia_latipinna
ENSECAG00000017994	EDC3	100	68.288	ENSPMEG00000023289	edc3	100	68.288	Poecilia_mexicana
ENSECAG00000017994	EDC3	100	68.566	ENSPREG00000016022	edc3	100	68.566	Poecilia_reticulata
ENSECAG00000017994	EDC3	100	96.654	ENSPPYG00000006642	EDC3	100	96.654	Pongo_abelii
ENSECAG00000017994	EDC3	88	100.000	ENSPCAG00000002802	EDC3	88	100.000	Procavia_capensis
ENSECAG00000017994	EDC3	100	97.244	ENSPCOG00000013364	EDC3	100	97.244	Propithecus_coquereli
ENSECAG00000017994	EDC3	100	96.260	ENSPVAG00000014733	EDC3	100	96.260	Pteropus_vampyrus
ENSECAG00000017994	EDC3	100	67.387	ENSPNYG00000021797	edc3	100	67.387	Pundamilia_nyererei
ENSECAG00000017994	EDC3	99	58.480	ENSPNYG00000009669	EDC3	99	58.480	Pundamilia_nyererei
ENSECAG00000017994	EDC3	100	69.650	ENSPNAG00000019657	edc3	100	69.650	Pygocentrus_nattereri
ENSECAG00000017994	EDC3	99	96.436	ENSRNOG00000019579	Edc3	99	96.436	Rattus_norvegicus
ENSECAG00000017994	EDC3	100	97.441	ENSRBIG00000019488	EDC3	100	97.441	Rhinopithecus_bieti
ENSECAG00000017994	EDC3	100	97.441	ENSRROG00000034959	EDC3	100	97.441	Rhinopithecus_roxellana
ENSECAG00000017994	EDC3	100	98.031	ENSSBOG00000004896	EDC3	100	98.031	Saimiri_boliviensis_boliviensis
ENSECAG00000017994	EDC3	96	91.616	ENSSHAG00000015075	EDC3	95	91.616	Sarcophilus_harrisii
ENSECAG00000017994	EDC3	100	63.333	ENSSFOG00015002439	edc3	100	64.981	Scleropages_formosus
ENSECAG00000017994	EDC3	100	70.135	ENSSFOG00015016939	edc3	100	70.817	Scleropages_formosus
ENSECAG00000017994	EDC3	99	57.505	ENSSMAG00000010176	-	99	57.505	Scophthalmus_maximus
ENSECAG00000017994	EDC3	100	68.566	ENSSMAG00000010695	edc3	100	69.155	Scophthalmus_maximus
ENSECAG00000017994	EDC3	100	69.020	ENSSDUG00000021844	edc3	100	69.608	Seriola_dumerili
ENSECAG00000017994	EDC3	100	59.533	ENSSDUG00000007671	EDC3	100	59.533	Seriola_dumerili
ENSECAG00000017994	EDC3	100	69.020	ENSSLDG00000022046	edc3	100	69.608	Seriola_lalandi_dorsalis
ENSECAG00000017994	EDC3	81	96.774	ENSSARG00000003907	EDC3	80	96.774	Sorex_araneus
ENSECAG00000017994	EDC3	100	88.583	ENSSPUG00000008232	EDC3	100	88.583	Sphenodon_punctatus
ENSECAG00000017994	EDC3	100	58.171	ENSSPAG00000020327	EDC3	100	58.171	Stegastes_partitus
ENSECAG00000017994	EDC3	100	69.941	ENSSPAG00000010009	edc3	100	69.941	Stegastes_partitus
ENSECAG00000017994	EDC3	100	97.835	ENSSSCG00000001903	EDC3	100	97.835	Sus_scrofa
ENSECAG00000017994	EDC3	100	88.583	ENSTGUG00000004007	EDC3	100	88.583	Taeniopygia_guttata
ENSECAG00000017994	EDC3	100	69.941	ENSTRUG00000017078	edc3	100	69.941	Takifugu_rubripes
ENSECAG00000017994	EDC3	100	68.493	ENSTNIG00000016047	edc3	100	68.493	Tetraodon_nigroviridis
ENSECAG00000017994	EDC3	100	96.850	ENSTTRG00000007990	EDC3	100	96.850	Tursiops_truncatus
ENSECAG00000017994	EDC3	100	97.441	ENSUAMG00000026710	-	100	97.441	Ursus_americanus
ENSECAG00000017994	EDC3	100	97.441	ENSUMAG00000005006	EDC3	96	97.441	Ursus_maritimus
ENSECAG00000017994	EDC3	79	87.037	ENSVPAG00000003499	-	79	87.037	Vicugna_pacos
ENSECAG00000017994	EDC3	100	97.441	ENSVVUG00000018601	EDC3	100	97.441	Vulpes_vulpes
ENSECAG00000017994	EDC3	68	82.184	ENSXETG00000010622	edc3	99	83.333	Xenopus_tropicalis
ENSECAG00000017994	EDC3	100	68.369	ENSXMAG00000007377	edc3	100	68.369	Xiphophorus_maculatus