EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000018018 (Gene tree)
Gene ID: 100050989
Gene Symbol: RRP1B
Alias: -
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 26265 bases
Position: chr26:40233465-40259729
Accession: 22589
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000015707	Nop52	PF05997.12	3e-70	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000019206	-	4962	XM_014736408	ENSECAP00000015707	755 (aa)	XP_014591894	F6QJS2

Gene Model

Click here to download ENSECAG00000018018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000018018's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000018018	RRP1B	50	50.532	ENSECAG00000015703	RRP1	83	51.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000018018	RRP1B	100	74.211	ENSG00000160208	RRP1B	100	74.211	Homo_sapiens
ENSECAG00000018018	RRP1B	56	48.694	ENSG00000160214	RRP1	78	62.857	Homo_sapiens
ENSECAG00000018018	RRP1B	64	51.163	ENSAPOG00000007490	-	50	46.875	Acanthochromis_polyacanthus
ENSECAG00000018018	RRP1B	72	83.721	ENSAMEG00000011401	RRP1B	76	83.721	Ailuropoda_melanoleuca
ENSECAG00000018018	RRP1B	58	53.333	ENSAOCG00000017894	-	95	56.122	Amphiprion_ocellaris
ENSECAG00000018018	RRP1B	64	46.721	ENSAPEG00000024150	-	50	46.094	Amphiprion_percula
ENSECAG00000018018	RRP1B	63	48.780	ENSATEG00000005045	-	50	48.780	Anabas_testudineus
ENSECAG00000018018	RRP1B	94	45.924	ENSAPLG00000004310	RRP1B	100	46.311	Anas_platyrhynchos
ENSECAG00000018018	RRP1B	99	43.943	ENSACAG00000017851	RRP1B	95	44.757	Anolis_carolinensis
ENSECAG00000018018	RRP1B	100	72.668	ENSANAG00000034889	RRP1B	100	72.668	Aotus_nancymaae
ENSECAG00000018018	RRP1B	100	73.580	ENSBTAG00000017418	RRP1B	100	73.580	Bos_taurus
ENSECAG00000018018	RRP1B	100	71.842	ENSCJAG00000017077	RRP1B	100	71.842	Callithrix_jacchus
ENSECAG00000018018	RRP1B	94	72.689	ENSCAFG00000010621	RRP1B	99	73.109	Canis_familiaris
ENSECAG00000018018	RRP1B	51	47.959	ENSCAFG00000010646	RRP1	88	46.244	Canis_familiaris
ENSECAG00000018018	RRP1B	51	47.959	ENSCAFG00020018979	RRP1	83	48.837	Canis_lupus_dingo
ENSECAG00000018018	RRP1B	100	72.991	ENSCAFG00020018901	RRP1B	100	73.386	Canis_lupus_dingo
ENSECAG00000018018	RRP1B	100	73.810	ENSCHIG00000021519	RRP1B	100	73.810	Capra_hircus
ENSECAG00000018018	RRP1B	52	47.772	ENSTSYG00000012831	RRP1	83	49.347	Carlito_syrichta
ENSECAG00000018018	RRP1B	100	60.395	ENSCPOG00000002396	RRP1B	100	61.053	Cavia_porcellus
ENSECAG00000018018	RRP1B	100	72.763	ENSCCAG00000029384	RRP1B	100	72.763	Cebus_capucinus
ENSECAG00000018018	RRP1B	56	48.463	ENSCCAG00000029828	RRP1	80	50.133	Cebus_capucinus
ENSECAG00000018018	RRP1B	100	73.026	ENSCATG00000017423	RRP1B	100	73.026	Cercocebus_atys
ENSECAG00000018018	RRP1B	100	61.809	ENSCLAG00000005622	RRP1B	100	61.750	Chinchilla_lanigera
ENSECAG00000018018	RRP1B	100	73.421	ENSCSAG00000007961	RRP1B	100	73.421	Chlorocebus_sabaeus
ENSECAG00000018018	RRP1B	52	64.662	ENSCHOG00000002426	-	82	64.662	Choloepus_hoffmanni
ENSECAG00000018018	RRP1B	99	51.871	ENSCPBG00000010310	RRP1B	98	50.822	Chrysemys_picta_bellii
ENSECAG00000018018	RRP1B	52	34.739	ENSCING00000003304	-	56	43.750	Ciona_intestinalis
ENSECAG00000018018	RRP1B	100	73.289	ENSCANG00000040952	RRP1B	100	73.289	Colobus_angolensis_palliatus
ENSECAG00000018018	RRP1B	56	46.729	ENSCGRG00001011920	Rrp1	86	49.741	Cricetulus_griseus_chok1gshd
ENSECAG00000018018	RRP1B	100	63.325	ENSCGRG00001010889	-	100	63.325	Cricetulus_griseus_chok1gshd
ENSECAG00000018018	RRP1B	100	63.193	ENSCGRG00001023882	-	100	63.193	Cricetulus_griseus_chok1gshd
ENSECAG00000018018	RRP1B	56	46.729	ENSCGRG00000008915	Rrp1	86	49.741	Cricetulus_griseus_crigri
ENSECAG00000018018	RRP1B	94	62.378	ENSCGRG00000001553	Rrp1b	97	62.291	Cricetulus_griseus_crigri
ENSECAG00000018018	RRP1B	59	53.846	ENSCSEG00000020711	-	78	53.846	Cynoglossus_semilaevis
ENSECAG00000018018	RRP1B	52	49.367	ENSDNOG00000019880	RRP1	82	50.802	Dasypus_novemcinctus
ENSECAG00000018018	RRP1B	100	65.309	ENSDNOG00000032774	RRP1B	100	66.448	Dasypus_novemcinctus
ENSECAG00000018018	RRP1B	93	59.441	ENSDORG00000005496	Rrp1b	100	59.141	Dipodomys_ordii
ENSECAG00000018018	RRP1B	100	58.793	ENSETEG00000019489	RRP1B	100	59.186	Echinops_telfairi
ENSECAG00000018018	RRP1B	100	98.411	ENSEASG00005001687	RRP1B	100	98.411	Equus_asinus_asinus
ENSECAG00000018018	RRP1B	50	50.532	ENSEASG00005001673	RRP1	83	51.459	Equus_asinus_asinus
ENSECAG00000018018	RRP1B	64	50.806	ENSELUG00000015885	-	99	44.444	Esox_lucius
ENSECAG00000018018	RRP1B	50	50.267	ENSFCAG00000008434	RRP1	81	50.267	Felis_catus
ENSECAG00000018018	RRP1B	100	71.466	ENSFCAG00000010272	RRP1B	100	72.069	Felis_catus
ENSECAG00000018018	RRP1B	58	44.954	ENSFDAG00000013728	RRP1	80	48.780	Fukomys_damarensis
ENSECAG00000018018	RRP1B	96	61.937	ENSFDAG00000010899	RRP1B	96	61.918	Fukomys_damarensis
ENSECAG00000018018	RRP1B	70	44.242	ENSFHEG00000016314	-	66	44.242	Fundulus_heteroclitus
ENSECAG00000018018	RRP1B	62	44.954	ENSGMOG00000001953	-	69	44.954	Gadus_morhua
ENSECAG00000018018	RRP1B	100	46.770	ENSGALG00000035696	RRP1B	100	47.938	Gallus_gallus
ENSECAG00000018018	RRP1B	65	48.062	ENSGACG00000001438	rrp1	73	48.062	Gasterosteus_aculeatus
ENSECAG00000018018	RRP1B	100	51.465	ENSGAGG00000000375	RRP1B	100	51.995	Gopherus_agassizii
ENSECAG00000018018	RRP1B	56	49.057	ENSGGOG00000000173	RRP1	80	50.667	Gorilla_gorilla
ENSECAG00000018018	RRP1B	100	74.079	ENSGGOG00000012069	RRP1B	100	74.079	Gorilla_gorilla
ENSECAG00000018018	RRP1B	99	62.073	ENSHGLG00000004968	RRP1B	100	63.158	Heterocephalus_glaber_female
ENSECAG00000018018	RRP1B	78	66.525	ENSHGLG00100002232	RRP1B	99	55.836	Heterocephalus_glaber_male
ENSECAG00000018018	RRP1B	66	45.455	ENSHCOG00000018388	-	61	45.455	Hippocampus_comes
ENSECAG00000018018	RRP1B	61	46.296	ENSIPUG00000000673	-	73	43.272	Ictalurus_punctatus
ENSECAG00000018018	RRP1B	54	47.317	ENSSTOG00000011116	RRP1	86	49.351	Ictidomys_tridecemlineatus
ENSECAG00000018018	RRP1B	99	67.380	ENSSTOG00000011790	RRP1B	96	67.984	Ictidomys_tridecemlineatus
ENSECAG00000018018	RRP1B	100	59.452	ENSJJAG00000021279	Rrp1b	100	59.014	Jaculus_jaculus
ENSECAG00000018018	RRP1B	61	50.400	ENSKMAG00000005539	rrp1	73	50.400	Kryptolebias_marmoratus
ENSECAG00000018018	RRP1B	50	50.773	ENSLACG00000017332	-	52	50.773	Latimeria_chalumnae
ENSECAG00000018018	RRP1B	63	52.419	ENSLOCG00000004064	-	67	51.938	Lepisosteus_oculatus
ENSECAG00000018018	RRP1B	88	62.832	ENSLAFG00000000766	RRP1B	94	69.124	Loxodonta_africana
ENSECAG00000018018	RRP1B	50	50.510	ENSLAFG00000022901	RRP1	84	50.765	Loxodonta_africana
ENSECAG00000018018	RRP1B	56	48.456	ENSMFAG00000003202	RRP1	80	50.933	Macaca_fascicularis
ENSECAG00000018018	RRP1B	100	73.553	ENSMFAG00000039152	RRP1B	100	73.553	Macaca_fascicularis
ENSECAG00000018018	RRP1B	100	70.526	ENSMMUG00000000104	RRP1B	100	70.526	Macaca_mulatta
ENSECAG00000018018	RRP1B	56	47.307	ENSMMUG00000012304	RRP1	80	49.869	Macaca_mulatta
ENSECAG00000018018	RRP1B	100	73.158	ENSMNEG00000034269	RRP1B	100	73.158	Macaca_nemestrina
ENSECAG00000018018	RRP1B	56	48.456	ENSMNEG00000031210	RRP1	80	50.933	Macaca_nemestrina
ENSECAG00000018018	RRP1B	95	72.083	ENSMLEG00000040044	RRP1B	99	72.245	Mandrillus_leucophaeus
ENSECAG00000018018	RRP1B	51	47.044	ENSMLEG00000037797	RRP1	79	49.563	Mandrillus_leucophaeus
ENSECAG00000018018	RRP1B	100	47.416	ENSMGAG00000014591	RRP1B	50	59.375	Meleagris_gallopavo
ENSECAG00000018018	RRP1B	100	61.082	ENSMAUG00000021508	Rrp1b	100	61.478	Mesocricetus_auratus
ENSECAG00000018018	RRP1B	100	74.769	ENSMICG00000004686	RRP1B	100	73.879	Microcebus_murinus
ENSECAG00000018018	RRP1B	100	59.763	ENSMOCG00000001117	Rrp1b	100	59.346	Microtus_ochrogaster
ENSECAG00000018018	RRP1B	100	64.721	ENSMODG00000021033	RRP1B	100	64.752	Monodelphis_domestica
ENSECAG00000018018	RRP1B	100	59.420	MGP_CAROLIEiJ_G0021376	Rrp1b	100	59.420	Mus_caroli
ENSECAG00000018018	RRP1B	100	59.031	ENSMUSG00000058392	Rrp1b	100	58.333	Mus_musculus
ENSECAG00000018018	RRP1B	100	60.738	MGP_PahariEiJ_G0023695	Rrp1b	100	60.738	Mus_pahari
ENSECAG00000018018	RRP1B	100	58.770	MGP_SPRETEiJ_G0022290	Rrp1b	100	58.877	Mus_spretus
ENSECAG00000018018	RRP1B	84	67.296	ENSMPUG00000009810	RRP1B	99	67.296	Mustela_putorius_furo
ENSECAG00000018018	RRP1B	51	61.842	ENSMLUG00000017788	RRP1	85	45.455	Myotis_lucifugus
ENSECAG00000018018	RRP1B	99	77.255	ENSMLUG00000007738	RRP1B	99	76.993	Myotis_lucifugus
ENSECAG00000018018	RRP1B	100	62.714	ENSNGAG00000021073	Rrp1b	100	63.421	Nannospalax_galili
ENSECAG00000018018	RRP1B	56	48.821	ENSNLEG00000034734	RRP1	80	51.587	Nomascus_leucogenys
ENSECAG00000018018	RRP1B	100	70.883	ENSNLEG00000001490	RRP1B	100	70.883	Nomascus_leucogenys
ENSECAG00000018018	RRP1B	76	86.555	ENSMEUG00000003226	-	89	86.555	Notamacropus_eugenii
ENSECAG00000018018	RRP1B	100	59.211	ENSODEG00000013177	RRP1B	100	59.289	Octodon_degus
ENSECAG00000018018	RRP1B	99	52.480	ENSOANG00000006470	RRP1B	99	53.543	Ornithorhynchus_anatinus
ENSECAG00000018018	RRP1B	94	53.591	ENSOCUG00000025931	RRP1B	100	52.999	Oryctolagus_cuniculus
ENSECAG00000018018	RRP1B	67	45.308	ENSORLG00020007199	-	58	45.358	Oryzias_latipes_hni
ENSECAG00000018018	RRP1B	65	46.400	ENSORLG00015004425	-	56	46.400	Oryzias_latipes_hsok
ENSECAG00000018018	RRP1B	65	48.413	ENSOMEG00000016910	-	58	48.413	Oryzias_melastigma
ENSECAG00000018018	RRP1B	90	69.729	ENSOGAG00000009872	RRP1B	95	75.352	Otolemur_garnettii
ENSECAG00000018018	RRP1B	94	71.429	ENSOARG00000011314	RRP1B	100	71.429	Ovis_aries
ENSECAG00000018018	RRP1B	94	72.803	ENSPPAG00000035319	RRP1B	99	72.702	Pan_paniscus
ENSECAG00000018018	RRP1B	100	71.070	ENSPPRG00000010356	RRP1B	100	71.598	Panthera_pardus
ENSECAG00000018018	RRP1B	78	73.515	ENSPTIG00000016894	RRP1B	99	72.967	Panthera_tigris_altaica
ENSECAG00000018018	RRP1B	100	73.947	ENSPTRG00000013958	RRP1B	100	73.947	Pan_troglodytes
ENSECAG00000018018	RRP1B	56	48.694	ENSPTRG00000013962	RRP1	80	50.933	Pan_troglodytes
ENSECAG00000018018	RRP1B	56	47.281	ENSPANG00000015097	RRP1	80	49.604	Papio_anubis
ENSECAG00000018018	RRP1B	100	73.421	ENSPANG00000011090	RRP1B	100	73.421	Papio_anubis
ENSECAG00000018018	RRP1B	99	51.742	ENSPSIG00000008152	RRP1B	96	52.168	Pelodiscus_sinensis
ENSECAG00000018018	RRP1B	100	63.408	ENSPEMG00000022490	Rrp1b	100	63.408	Peromyscus_maniculatus_bairdii
ENSECAG00000018018	RRP1B	100	64.613	ENSPCIG00000015513	RRP1B	100	64.883	Phascolarctos_cinereus
ENSECAG00000018018	RRP1B	56	51.270	ENSPCIG00000015523	-	75	57.550	Phascolarctos_cinereus
ENSECAG00000018018	RRP1B	65	44.595	ENSPMEG00000007042	-	60	45.161	Poecilia_mexicana
ENSECAG00000018018	RRP1B	65	45.232	ENSPREG00000015673	-	61	45.232	Poecilia_reticulata
ENSECAG00000018018	RRP1B	100	73.816	ENSPPYG00000011470	RRP1B	100	73.816	Pongo_abelii
ENSECAG00000018018	RRP1B	56	48.009	ENSPPYG00000011474	RRP1	80	50.131	Pongo_abelii
ENSECAG00000018018	RRP1B	85	87.368	ENSPCAG00000013723	RRP1B	91	87.368	Procavia_capensis
ENSECAG00000018018	RRP1B	100	74.901	ENSPCOG00000017927	RRP1B	100	75.033	Propithecus_coquereli
ENSECAG00000018018	RRP1B	99	70.053	ENSPVAG00000001436	RRP1B	99	70.317	Pteropus_vampyrus
ENSECAG00000018018	RRP1B	56	58.750	ENSPNAG00000007718	-	51	44.828	Pygocentrus_nattereri
ENSECAG00000018018	RRP1B	100	63.553	ENSRNOG00000001194	Rrp1b	100	63.553	Rattus_norvegicus
ENSECAG00000018018	RRP1B	100	69.737	ENSRBIG00000041689	RRP1B	100	69.737	Rhinopithecus_bieti
ENSECAG00000018018	RRP1B	56	48.219	ENSRBIG00000032082	RRP1	80	50.667	Rhinopithecus_bieti
ENSECAG00000018018	RRP1B	100	73.684	ENSRROG00000031499	RRP1B	100	73.684	Rhinopithecus_roxellana
ENSECAG00000018018	RRP1B	56	48.219	ENSRROG00000039799	RRP1	80	50.667	Rhinopithecus_roxellana
ENSECAG00000018018	RRP1B	94	68.548	ENSSBOG00000034727	RRP1B	99	68.548	Saimiri_boliviensis_boliviensis
ENSECAG00000018018	RRP1B	100	64.974	ENSSHAG00000017789	RRP1B	100	64.752	Sarcophilus_harrisii
ENSECAG00000018018	RRP1B	64	48.462	ENSSMAG00000016847	-	88	44.892	Scophthalmus_maximus
ENSECAG00000018018	RRP1B	66	49.242	ENSSDUG00000000551	-	54	49.242	Seriola_dumerili
ENSECAG00000018018	RRP1B	66	49.242	ENSSLDG00000002538	-	54	49.242	Seriola_lalandi_dorsalis
ENSECAG00000018018	RRP1B	71	63.860	ENSSARG00000003108	-	75	63.860	Sorex_araneus
ENSECAG00000018018	RRP1B	50	53.807	ENSSPUG00000002834	RRP1B	100	45.019	Sphenodon_punctatus
ENSECAG00000018018	RRP1B	64	47.656	ENSSPAG00000005370	-	52	47.656	Stegastes_partitus
ENSECAG00000018018	RRP1B	100	67.593	ENSSSCG00000021698	RRP1B	100	68.254	Sus_scrofa
ENSECAG00000018018	RRP1B	94	47.131	ENSTGUG00000005926	RRP1B	100	46.986	Taeniopygia_guttata
ENSECAG00000018018	RRP1B	59	47.191	ENSTNIG00000005053	rrp1	81	43.597	Tetraodon_nigroviridis
ENSECAG00000018018	RRP1B	77	79.882	ENSTBEG00000000422	RRP1B	100	79.882	Tupaia_belangeri
ENSECAG00000018018	RRP1B	100	70.806	ENSTTRG00000000723	RRP1B	100	71.070	Tursiops_truncatus
ENSECAG00000018018	RRP1B	100	70.866	ENSUAMG00000026765	RRP1B	100	69.921	Ursus_americanus
ENSECAG00000018018	RRP1B	69	84.091	ENSUMAG00000025510	RRP1B	90	82.576	Ursus_maritimus
ENSECAG00000018018	RRP1B	94	72.308	ENSVVUG00000024509	RRP1B	99	72.727	Vulpes_vulpes
ENSECAG00000018018	RRP1B	57	50.000	ENSXETG00000013683	rrp1b	65	51.064	Xenopus_tropicalis
ENSECAG00000018018	RRP1B	65	46.257	ENSXMAG00000023123	-	59	51.020	Xiphophorus_maculatus