EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000018042 (Gene tree)
Gene ID: 100050647
Gene Symbol: SRP54
Alias: -
Full Name: signal recognition particle 54
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 42717 bases
Position: chr1:173792269-173834985
Accession: 23587
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000016030	SRP54	PF00448.22	3.1e-78	1	1
ENSECAP00000016030	SRP54_N	PF02881.19	2.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000019578	-	2519	-	ENSECAP00000016030	507 (aa)	-	F7ASN4

Gene Model

Click here to download ENSECAG00000018042's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000018042's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000018042	SRP54	98	99.799	ENSG00000100883	SRP54	100	100.000	Homo_sapiens
ENSECAG00000018042	SRP54	98	95.582	ENSAPOG00000011314	srp54	99	95.582	Acanthochromis_polyacanthus
ENSECAG00000018042	SRP54	98	99.799	ENSAMEG00000015544	SRP54	99	99.799	Ailuropoda_melanoleuca
ENSECAG00000018042	SRP54	89	94.655	ENSACIG00000022831	srp54	97	94.655	Amphilophus_citrinellus
ENSECAG00000018042	SRP54	98	95.582	ENSAOCG00000019401	srp54	99	95.582	Amphiprion_ocellaris
ENSECAG00000018042	SRP54	98	95.582	ENSAPEG00000001977	srp54	99	95.582	Amphiprion_percula
ENSECAG00000018042	SRP54	98	95.984	ENSATEG00000013877	srp54	99	95.984	Anabas_testudineus
ENSECAG00000018042	SRP54	93	98.734	ENSAPLG00000010125	SRP54	95	98.734	Anas_platyrhynchos
ENSECAG00000018042	SRP54	84	95.327	ENSACAG00000010631	-	99	95.327	Anolis_carolinensis
ENSECAG00000018042	SRP54	98	98.394	ENSACAG00000002103	-	99	98.394	Anolis_carolinensis
ENSECAG00000018042	SRP54	64	81.902	ENSACAG00000001124	-	98	81.902	Anolis_carolinensis
ENSECAG00000018042	SRP54	98	99.799	ENSANAG00000022133	SRP54	99	99.799	Aotus_nancymaae
ENSECAG00000018042	SRP54	98	95.783	ENSACLG00000015866	srp54	99	95.783	Astatotilapia_calliptera
ENSECAG00000018042	SRP54	98	95.382	ENSAMXG00000032669	SRP54	99	95.382	Astyanax_mexicanus
ENSECAG00000018042	SRP54	98	99.799	ENSBTAG00000019085	SRP54	99	99.799	Bos_taurus
ENSECAG00000018042	SRP54	98	71.687	WBGene00009012	F21D5.7	100	71.687	Caenorhabditis_elegans
ENSECAG00000018042	SRP54	98	99.799	ENSCJAG00000006581	SRP54	99	99.799	Callithrix_jacchus
ENSECAG00000018042	SRP54	98	99.799	ENSCAFG00000013331	SRP54	99	99.799	Canis_familiaris
ENSECAG00000018042	SRP54	98	99.799	ENSCAFG00020023427	SRP54	99	99.799	Canis_lupus_dingo
ENSECAG00000018042	SRP54	98	99.799	ENSCHIG00000026345	SRP54	99	99.799	Capra_hircus
ENSECAG00000018042	SRP54	98	99.598	ENSTSYG00000002680	-	99	99.598	Carlito_syrichta
ENSECAG00000018042	SRP54	94	88.632	ENSTSYG00000035333	-	93	88.632	Carlito_syrichta
ENSECAG00000018042	SRP54	93	64.286	ENSCAPG00000008780	SRP54	100	64.286	Cavia_aperea
ENSECAG00000018042	SRP54	98	99.398	ENSCPOG00000003691	SRP54	99	99.398	Cavia_porcellus
ENSECAG00000018042	SRP54	88	99.517	ENSCCAG00000024179	SRP54	99	99.758	Cebus_capucinus
ENSECAG00000018042	SRP54	98	99.799	ENSCATG00000034083	SRP54	99	99.799	Cercocebus_atys
ENSECAG00000018042	SRP54	98	99.799	ENSCLAG00000015076	SRP54	99	99.799	Chinchilla_lanigera
ENSECAG00000018042	SRP54	98	99.799	ENSCSAG00000015575	SRP54	99	99.799	Chlorocebus_sabaeus
ENSECAG00000018042	SRP54	95	87.942	ENSCHOG00000008986	SRP54	100	87.942	Choloepus_hoffmanni
ENSECAG00000018042	SRP54	98	98.996	ENSCPBG00000026195	SRP54	99	98.996	Chrysemys_picta_bellii
ENSECAG00000018042	SRP54	97	82.892	ENSCING00000007380	-	98	82.892	Ciona_intestinalis
ENSECAG00000018042	SRP54	98	99.799	ENSCANG00000028532	SRP54	99	99.799	Colobus_angolensis_palliatus
ENSECAG00000018042	SRP54	98	99.398	ENSCGRG00001009525	-	99	99.398	Cricetulus_griseus_chok1gshd
ENSECAG00000018042	SRP54	76	99.481	ENSCGRG00000009453	-	89	99.481	Cricetulus_griseus_crigri
ENSECAG00000018042	SRP54	98	94.980	ENSCSEG00000012392	srp54	99	94.980	Cynoglossus_semilaevis
ENSECAG00000018042	SRP54	98	95.582	ENSCVAG00000010395	srp54	99	95.582	Cyprinodon_variegatus
ENSECAG00000018042	SRP54	98	95.783	ENSDARG00000098367	srp54	99	95.783	Danio_rerio
ENSECAG00000018042	SRP54	98	99.799	ENSDNOG00000032525	SRP54	99	99.799	Dasypus_novemcinctus
ENSECAG00000018042	SRP54	88	85.045	ENSDORG00000005159	-	97	85.045	Dipodomys_ordii
ENSECAG00000018042	SRP54	96	77.526	FBgn0010747	Srp54k	97	77.374	Drosophila_melanogaster
ENSECAG00000018042	SRP54	81	58.537	ENSETEG00000012102	-	99	58.537	Echinops_telfairi
ENSECAG00000018042	SRP54	98	98.594	ENSETEG00000016307	-	99	98.594	Echinops_telfairi
ENSECAG00000018042	SRP54	98	88.306	ENSEBUG00000009437	-	98	88.306	Eptatretus_burgeri
ENSECAG00000018042	SRP54	98	99.799	ENSEASG00005002057	SRP54	99	99.799	Equus_asinus_asinus
ENSECAG00000018042	SRP54	98	82.932	ENSEEUG00000001511	SRP54	99	82.932	Erinaceus_europaeus
ENSECAG00000018042	SRP54	98	94.980	ENSELUG00000003395	srp54	99	94.980	Esox_lucius
ENSECAG00000018042	SRP54	98	99.598	ENSFCAG00000032033	SRP54	99	99.598	Felis_catus
ENSECAG00000018042	SRP54	98	98.594	ENSFALG00000005995	SRP54	99	98.594	Ficedula_albicollis
ENSECAG00000018042	SRP54	98	99.799	ENSFDAG00000016767	SRP54	99	100.000	Fukomys_damarensis
ENSECAG00000018042	SRP54	98	95.181	ENSFHEG00000004263	srp54	99	95.181	Fundulus_heteroclitus
ENSECAG00000018042	SRP54	93	89.831	ENSGMOG00000011391	srp54	99	89.831	Gadus_morhua
ENSECAG00000018042	SRP54	98	98.594	ENSGALG00000023135	SRP54	99	98.594	Gallus_gallus
ENSECAG00000018042	SRP54	98	95.783	ENSGAFG00000011586	srp54	99	95.783	Gambusia_affinis
ENSECAG00000018042	SRP54	98	95.181	ENSGACG00000004181	srp54	100	95.161	Gasterosteus_aculeatus
ENSECAG00000018042	SRP54	98	98.996	ENSGAGG00000014766	SRP54	99	98.996	Gopherus_agassizii
ENSECAG00000018042	SRP54	98	99.799	ENSGGOG00000002926	SRP54	99	99.799	Gorilla_gorilla
ENSECAG00000018042	SRP54	98	95.783	ENSHBUG00000005678	srp54	99	95.783	Haplochromis_burtoni
ENSECAG00000018042	SRP54	98	99.799	ENSHGLG00000002850	SRP54	99	99.799	Heterocephalus_glaber_female
ENSECAG00000018042	SRP54	98	68.537	ENSHGLG00100007281	-	99	68.537	Heterocephalus_glaber_male
ENSECAG00000018042	SRP54	98	99.799	ENSHGLG00100005263	SRP54	99	99.799	Heterocephalus_glaber_male
ENSECAG00000018042	SRP54	98	93.775	ENSHCOG00000021127	srp54	99	93.775	Hippocampus_comes
ENSECAG00000018042	SRP54	98	94.980	ENSIPUG00000001420	srp54	99	94.980	Ictalurus_punctatus
ENSECAG00000018042	SRP54	98	99.799	ENSSTOG00000016023	SRP54	99	99.799	Ictidomys_tridecemlineatus
ENSECAG00000018042	SRP54	98	94.578	ENSJJAG00000013417	-	99	94.578	Jaculus_jaculus
ENSECAG00000018042	SRP54	86	76.037	ENSJJAG00000016404	-	98	76.037	Jaculus_jaculus
ENSECAG00000018042	SRP54	98	95.181	ENSKMAG00000007707	srp54	99	95.181	Kryptolebias_marmoratus
ENSECAG00000018042	SRP54	98	95.582	ENSLBEG00000021122	srp54	99	95.582	Labrus_bergylta
ENSECAG00000018042	SRP54	98	95.582	ENSLBEG00000018690	srp54	99	95.582	Labrus_bergylta
ENSECAG00000018042	SRP54	98	95.783	ENSLACG00000017890	SRP54	99	95.783	Latimeria_chalumnae
ENSECAG00000018042	SRP54	98	96.586	ENSLOCG00000009440	srp54	99	96.586	Lepisosteus_oculatus
ENSECAG00000018042	SRP54	98	99.799	ENSLAFG00000012007	SRP54	99	99.799	Loxodonta_africana
ENSECAG00000018042	SRP54	98	99.799	ENSMFAG00000044371	SRP54	99	99.799	Macaca_fascicularis
ENSECAG00000018042	SRP54	98	99.799	ENSMMUG00000015073	FAM177A1	99	99.799	Macaca_mulatta
ENSECAG00000018042	SRP54	98	99.799	ENSMNEG00000006947	SRP54	99	99.799	Macaca_nemestrina
ENSECAG00000018042	SRP54	98	99.799	ENSMLEG00000042251	SRP54	99	99.799	Mandrillus_leucophaeus
ENSECAG00000018042	SRP54	98	95.783	ENSMAMG00000004803	srp54	99	95.783	Mastacembelus_armatus
ENSECAG00000018042	SRP54	98	95.783	ENSMZEG00005027528	srp54	99	95.783	Maylandia_zebra
ENSECAG00000018042	SRP54	98	93.800	ENSMGAG00000012481	SRP54	99	93.800	Meleagris_gallopavo
ENSECAG00000018042	SRP54	98	99.598	ENSMAUG00000014447	-	99	99.598	Mesocricetus_auratus
ENSECAG00000018042	SRP54	98	99.799	ENSMICG00000010270	SRP54	99	99.799	Microcebus_murinus
ENSECAG00000018042	SRP54	86	99.539	ENSMOCG00000000948	-	99	99.539	Microtus_ochrogaster
ENSECAG00000018042	SRP54	88	94.183	ENSMMOG00000020303	srp54	98	94.183	Mola_mola
ENSECAG00000018042	SRP54	98	99.598	ENSMODG00000012925	-	99	99.598	Monodelphis_domestica
ENSECAG00000018042	SRP54	98	99.598	ENSMODG00000023150	-	99	99.598	Monodelphis_domestica
ENSECAG00000018042	SRP54	87	95.485	ENSMALG00000009163	srp54	98	95.485	Monopterus_albus
ENSECAG00000018042	SRP54	98	99.598	MGP_CAROLIEiJ_G0017754	-	99	99.598	Mus_caroli
ENSECAG00000018042	SRP54	98	98.795	ENSMUSG00000079108	Srp54c	99	98.795	Mus_musculus
ENSECAG00000018042	SRP54	98	99.598	ENSMUSG00000112449	Srp54b	99	99.598	Mus_musculus
ENSECAG00000018042	SRP54	98	99.598	ENSMUSG00000073079	Srp54a	100	100.000	Mus_musculus
ENSECAG00000018042	SRP54	98	99.598	MGP_PahariEiJ_G0029510	-	99	99.598	Mus_pahari
ENSECAG00000018042	SRP54	98	99.799	ENSMPUG00000016302	SRP54	99	99.799	Mustela_putorius_furo
ENSECAG00000018042	SRP54	98	99.197	ENSMLUG00000008958	SRP54	99	99.197	Myotis_lucifugus
ENSECAG00000018042	SRP54	98	89.558	ENSNGAG00000019806	-	99	89.558	Nannospalax_galili
ENSECAG00000018042	SRP54	86	95.392	ENSNBRG00000006000	srp54	99	95.392	Neolamprologus_brichardi
ENSECAG00000018042	SRP54	98	99.799	ENSNLEG00000003496	SRP54	99	99.799	Nomascus_leucogenys
ENSECAG00000018042	SRP54	66	100.000	ENSMEUG00000000138	-	76	100.000	Notamacropus_eugenii
ENSECAG00000018042	SRP54	56	100.000	ENSOPRG00000014502	-	59	100.000	Ochotona_princeps
ENSECAG00000018042	SRP54	98	99.799	ENSODEG00000004865	SRP54	99	99.799	Octodon_degus
ENSECAG00000018042	SRP54	98	95.783	ENSONIG00000011768	srp54	99	95.783	Oreochromis_niloticus
ENSECAG00000018042	SRP54	98	99.799	ENSOANG00000014051	SRP54	99	99.799	Ornithorhynchus_anatinus
ENSECAG00000018042	SRP54	98	99.197	ENSOCUG00000007838	SRP54	99	99.197	Oryctolagus_cuniculus
ENSECAG00000018042	SRP54	98	95.582	ENSORLG00000010027	srp54	99	95.582	Oryzias_latipes
ENSECAG00000018042	SRP54	98	95.582	ENSORLG00020001878	srp54	99	95.582	Oryzias_latipes_hni
ENSECAG00000018042	SRP54	98	95.582	ENSORLG00015021866	srp54	99	95.582	Oryzias_latipes_hsok
ENSECAG00000018042	SRP54	98	95.382	ENSOMEG00000020952	srp54	99	95.382	Oryzias_melastigma
ENSECAG00000018042	SRP54	98	99.799	ENSOGAG00000012188	SRP54	99	99.799	Otolemur_garnettii
ENSECAG00000018042	SRP54	98	99.799	ENSOARG00000007160	SRP54	99	99.799	Ovis_aries
ENSECAG00000018042	SRP54	98	99.799	ENSPPAG00000017434	SRP54	99	99.799	Pan_paniscus
ENSECAG00000018042	SRP54	98	98.594	ENSPPRG00000014047	SRP54	99	98.594	Panthera_pardus
ENSECAG00000018042	SRP54	98	99.598	ENSPTIG00000000744	SRP54	95	99.598	Panthera_tigris_altaica
ENSECAG00000018042	SRP54	98	99.799	ENSPTRG00000006259	FAM177A1	99	99.799	Pan_troglodytes
ENSECAG00000018042	SRP54	98	99.799	ENSPANG00000023853	SRP54	99	99.799	Papio_anubis
ENSECAG00000018042	SRP54	98	95.382	ENSPKIG00000001953	srp54	99	95.382	Paramormyrops_kingsleyae
ENSECAG00000018042	SRP54	98	98.795	ENSPSIG00000006476	SRP54	99	98.795	Pelodiscus_sinensis
ENSECAG00000018042	SRP54	91	93.043	ENSPMGG00000004127	srp54	99	93.043	Periophthalmus_magnuspinnatus
ENSECAG00000018042	SRP54	98	86.546	ENSPEMG00000019634	-	99	86.546	Peromyscus_maniculatus_bairdii
ENSECAG00000018042	SRP54	98	89.718	ENSPMAG00000006078	-	98	89.718	Petromyzon_marinus
ENSECAG00000018042	SRP54	98	99.598	ENSPCIG00000016175	SRP54	99	99.598	Phascolarctos_cinereus
ENSECAG00000018042	SRP54	98	95.783	ENSPFOG00000008870	srp54	99	95.783	Poecilia_formosa
ENSECAG00000018042	SRP54	98	95.783	ENSPLAG00000009889	srp54	99	95.783	Poecilia_latipinna
ENSECAG00000018042	SRP54	98	95.783	ENSPMEG00000008601	srp54	99	95.783	Poecilia_mexicana
ENSECAG00000018042	SRP54	98	95.783	ENSPREG00000004505	srp54	99	95.783	Poecilia_reticulata
ENSECAG00000018042	SRP54	98	94.578	ENSPPYG00000005739	SRP54	99	94.578	Pongo_abelii
ENSECAG00000018042	SRP54	98	95.582	ENSPCAG00000006268	SRP54	99	95.582	Procavia_capensis
ENSECAG00000018042	SRP54	98	97.796	ENSPCOG00000022473	SRP54	99	97.796	Propithecus_coquereli
ENSECAG00000018042	SRP54	63	100.000	ENSPVAG00000010056	SRP54	82	100.000	Pteropus_vampyrus
ENSECAG00000018042	SRP54	98	95.783	ENSPNYG00000009717	srp54	99	95.783	Pundamilia_nyererei
ENSECAG00000018042	SRP54	98	95.582	ENSPNAG00000008544	srp54	99	95.582	Pygocentrus_nattereri
ENSECAG00000018042	SRP54	98	99.398	ENSRNOG00000032776	Srp54a	99	99.398	Rattus_norvegicus
ENSECAG00000018042	SRP54	98	99.799	ENSRROG00000041292	SRP54	99	99.799	Rhinopithecus_roxellana
ENSECAG00000018042	SRP54	85	53.061	YPR088C	SRP54	95	48.263	Saccharomyces_cerevisiae
ENSECAG00000018042	SRP54	92	99.786	ENSSBOG00000035145	SRP54	99	99.786	Saimiri_boliviensis_boliviensis
ENSECAG00000018042	SRP54	66	99.703	ENSSHAG00000000671	SRP54	98	99.703	Sarcophilus_harrisii
ENSECAG00000018042	SRP54	98	95.984	ENSSFOG00015013920	srp54	99	95.984	Scleropages_formosus
ENSECAG00000018042	SRP54	98	89.583	ENSSMAG00000002441	srp54	99	89.583	Scophthalmus_maximus
ENSECAG00000018042	SRP54	98	95.382	ENSSDUG00000018586	srp54	99	95.382	Seriola_dumerili
ENSECAG00000018042	SRP54	98	95.181	ENSSLDG00000010476	srp54	99	95.181	Seriola_lalandi_dorsalis
ENSECAG00000018042	SRP54	98	99.799	ENSSARG00000002744	SRP54	99	99.799	Sorex_araneus
ENSECAG00000018042	SRP54	98	98.996	ENSSPUG00000013101	SRP54	99	98.996	Sphenodon_punctatus
ENSECAG00000018042	SRP54	98	95.582	ENSSPAG00000002354	srp54	99	95.582	Stegastes_partitus
ENSECAG00000018042	SRP54	98	99.799	ENSSSCG00000001955	SRP54	99	99.799	Sus_scrofa
ENSECAG00000018042	SRP54	93	98.734	ENSTGUG00000011945	-	95	98.734	Taeniopygia_guttata
ENSECAG00000018042	SRP54	98	94.980	ENSTRUG00000007057	srp54	99	94.980	Takifugu_rubripes
ENSECAG00000018042	SRP54	98	94.578	ENSTNIG00000002589	srp54	99	94.578	Tetraodon_nigroviridis
ENSECAG00000018042	SRP54	87	91.156	ENSTBEG00000011409	SRP54	99	91.156	Tupaia_belangeri
ENSECAG00000018042	SRP54	98	89.558	ENSTTRG00000000928	SRP54	99	89.558	Tursiops_truncatus
ENSECAG00000018042	SRP54	52	100.000	ENSUAMG00000012385	SRP54	100	100.000	Ursus_americanus
ENSECAG00000018042	SRP54	98	99.799	ENSUMAG00000011234	SRP54	99	99.799	Ursus_maritimus
ENSECAG00000018042	SRP54	93	99.789	ENSVPAG00000005668	SRP54	100	99.789	Vicugna_pacos
ENSECAG00000018042	SRP54	98	99.799	ENSVVUG00000019962	SRP54	99	99.799	Vulpes_vulpes
ENSECAG00000018042	SRP54	98	81.836	ENSXETG00000012290	srp54	99	81.836	Xenopus_tropicalis
ENSECAG00000018042	SRP54	87	95.937	ENSXCOG00000004658	srp54	96	95.937	Xiphophorus_couchianus
ENSECAG00000018042	SRP54	98	95.783	ENSXMAG00000018315	srp54	99	95.783	Xiphophorus_maculatus