EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000018148 (Gene tree)
Gene ID: 106780830
Gene Symbol: SNRPN
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide N
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 15924 bases
Position: chr1:111315598-111331521
Accession: 23402
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000015877	LSM	PF01423.22	1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000019401	-	1240	-	ENSECAP00000015877	240 (aa)	XP_023507663	F7CI38

Gene Model

Click here to download ENSECAG00000018148's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000018148's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000018148	SNRPN	92	92.308	ENSECAG00000011944	SNRPB	96	92.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000018148	SNRPN	100	99.583	ENSG00000128739	SNRPN	100	100.000	Homo_sapiens
ENSECAG00000018148	SNRPN	99	100.000	ENSAMEG00000007034	SNRPN	98	100.000	Ailuropoda_melanoleuca
ENSECAG00000018148	SNRPN	100	99.583	ENSANAG00000034241	SNRPN	100	99.583	Aotus_nancymaae
ENSECAG00000018148	SNRPN	100	99.167	ENSBTAG00000008251	SNRPN	100	99.167	Bos_taurus
ENSECAG00000018148	SNRPN	95	99.123	ENSCJAG00000042622	-	95	99.123	Callithrix_jacchus
ENSECAG00000018148	SNRPN	100	99.583	ENSCJAG00000003759	-	100	99.583	Callithrix_jacchus
ENSECAG00000018148	SNRPN	100	100.000	ENSCAFG00000010127	SNRPN	100	100.000	Canis_familiaris
ENSECAG00000018148	SNRPN	100	100.000	ENSCAFG00020024075	SNRPN	100	100.000	Canis_lupus_dingo
ENSECAG00000018148	SNRPN	100	99.167	ENSCHIG00000017477	SNRPN	100	99.167	Capra_hircus
ENSECAG00000018148	SNRPN	100	99.583	ENSTSYG00000005248	SNRPN	100	99.583	Carlito_syrichta
ENSECAG00000018148	SNRPN	100	99.583	ENSCAPG00000003047	SNRPN	100	99.583	Cavia_aperea
ENSECAG00000018148	SNRPN	100	99.583	ENSCPOG00000020270	SNRPN	100	99.583	Cavia_porcellus
ENSECAG00000018148	SNRPN	100	99.583	ENSCCAG00000024231	SNRPN	100	99.583	Cebus_capucinus
ENSECAG00000018148	SNRPN	100	99.583	ENSCATG00000032518	SNRPN	100	99.583	Cercocebus_atys
ENSECAG00000018148	SNRPN	100	99.583	ENSCLAG00000011376	SNRPN	100	99.583	Chinchilla_lanigera
ENSECAG00000018148	SNRPN	100	99.583	ENSCSAG00000006406	SNRPN	100	99.583	Chlorocebus_sabaeus
ENSECAG00000018148	SNRPN	98	98.291	ENSCHOG00000001846	SNRPN	88	98.291	Choloepus_hoffmanni
ENSECAG00000018148	SNRPN	100	99.583	ENSCANG00000041156	SNRPN	100	99.583	Colobus_angolensis_palliatus
ENSECAG00000018148	SNRPN	100	99.167	ENSCGRG00001004136	Snrpn	100	99.167	Cricetulus_griseus_chok1gshd
ENSECAG00000018148	SNRPN	100	98.750	ENSCGRG00000001621	Snrpn	100	98.750	Cricetulus_griseus_crigri
ENSECAG00000018148	SNRPN	72	92.486	ENSCVAG00000014193	SNRPN	69	92.857	Cyprinodon_variegatus
ENSECAG00000018148	SNRPN	99	98.745	ENSDNOG00000037060	SNRPN	98	98.745	Dasypus_novemcinctus
ENSECAG00000018148	SNRPN	100	99.167	ENSDORG00000004527	Snrpn	100	99.167	Dipodomys_ordii
ENSECAG00000018148	SNRPN	100	100.000	ENSEASG00005017871	SNRPN	100	100.000	Equus_asinus_asinus
ENSECAG00000018148	SNRPN	99	99.163	ENSEEUG00000007440	-	100	99.163	Erinaceus_europaeus
ENSECAG00000018148	SNRPN	100	100.000	ENSFCAG00000022298	-	100	100.000	Felis_catus
ENSECAG00000018148	SNRPN	100	99.167	ENSFDAG00000016578	-	100	99.167	Fukomys_damarensis
ENSECAG00000018148	SNRPN	76	85.792	ENSFDAG00000010528	-	86	83.333	Fukomys_damarensis
ENSECAG00000018148	SNRPN	75	76.243	ENSGMOG00000018161	SNRPN	93	73.239	Gadus_morhua
ENSECAG00000018148	SNRPN	100	99.583	ENSGGOG00000003988	SNRPN	100	99.583	Gorilla_gorilla
ENSECAG00000018148	SNRPN	90	73.023	ENSGGOG00000024469	-	69	83.942	Gorilla_gorilla
ENSECAG00000018148	SNRPN	89	90.141	ENSHGLG00000019812	-	89	90.610	Heterocephalus_glaber_female
ENSECAG00000018148	SNRPN	90	80.930	ENSHGLG00000020936	-	88	80.282	Heterocephalus_glaber_female
ENSECAG00000018148	SNRPN	100	99.583	ENSHGLG00000011924	SNRPN	100	99.583	Heterocephalus_glaber_female
ENSECAG00000018148	SNRPN	100	85.000	ENSHGLG00000002327	-	92	84.615	Heterocephalus_glaber_female
ENSECAG00000018148	SNRPN	100	99.583	ENSHGLG00100016559	SNRPN	100	99.583	Heterocephalus_glaber_male
ENSECAG00000018148	SNRPN	100	82.500	ENSHGLG00100004881	-	92	82.805	Heterocephalus_glaber_male
ENSECAG00000018148	SNRPN	89	90.141	ENSHGLG00100021056	-	89	90.610	Heterocephalus_glaber_male
ENSECAG00000018148	SNRPN	100	99.583	ENSSTOG00000001339	SNRPN	100	99.583	Ictidomys_tridecemlineatus
ENSECAG00000018148	SNRPN	99	99.163	ENSLAFG00000009458	SNRPN	99	99.163	Loxodonta_africana
ENSECAG00000018148	SNRPN	100	99.583	ENSMFAG00000042235	SNRPN	100	99.583	Macaca_fascicularis
ENSECAG00000018148	SNRPN	100	99.583	ENSMMUG00000023139	SNURF	100	99.583	Macaca_mulatta
ENSECAG00000018148	SNRPN	100	99.583	ENSMNEG00000031291	SNRPN	100	99.583	Macaca_nemestrina
ENSECAG00000018148	SNRPN	100	99.583	ENSMLEG00000038837	SNRPN	100	99.583	Mandrillus_leucophaeus
ENSECAG00000018148	SNRPN	92	85.455	ENSMGAG00000008696	SNRPN	92	85.455	Meleagris_gallopavo
ENSECAG00000018148	SNRPN	100	99.583	ENSMAUG00000000051	Snrpn	100	99.583	Mesocricetus_auratus
ENSECAG00000018148	SNRPN	100	99.583	ENSMICG00000042356	SNRPN	100	99.583	Microcebus_murinus
ENSECAG00000018148	SNRPN	100	99.583	ENSMOCG00000015350	Snrpn	100	99.583	Microtus_ochrogaster
ENSECAG00000018148	SNRPN	92	93.665	ENSMODG00000013926	-	92	93.665	Monodelphis_domestica
ENSECAG00000018148	SNRPN	100	99.583	MGP_CAROLIEiJ_G0029815	Snrpn	100	99.583	Mus_caroli
ENSECAG00000018148	SNRPN	100	99.583	ENSMUSG00000102252	Snrpn	100	99.583	Mus_musculus
ENSECAG00000018148	SNRPN	100	99.583	MGP_PahariEiJ_G0013040	Snrpn	100	99.583	Mus_pahari
ENSECAG00000018148	SNRPN	100	99.583	MGP_SPRETEiJ_G0030918	Snrpn	100	99.583	Mus_spretus
ENSECAG00000018148	SNRPN	88	50.711	ENSMPUG00000007115	-	64	70.423	Mustela_putorius_furo
ENSECAG00000018148	SNRPN	100	100.000	ENSMPUG00000014638	-	100	100.000	Mustela_putorius_furo
ENSECAG00000018148	SNRPN	95	61.842	ENSMLUG00000024428	-	62	71.111	Myotis_lucifugus
ENSECAG00000018148	SNRPN	99	99.582	ENSMLUG00000023361	-	98	99.582	Myotis_lucifugus
ENSECAG00000018148	SNRPN	85	60.784	ENSMLUG00000025849	-	73	63.057	Myotis_lucifugus
ENSECAG00000018148	SNRPN	100	99.583	ENSNGAG00000000181	Snrpn	100	99.583	Nannospalax_galili
ENSECAG00000018148	SNRPN	100	83.333	ENSNLEG00000001376	SNRPN	99	83.333	Nomascus_leucogenys
ENSECAG00000018148	SNRPN	98	81.624	ENSODEG00000016065	-	87	82.609	Octodon_degus
ENSECAG00000018148	SNRPN	100	95.417	ENSODEG00000019708	-	93	98.643	Octodon_degus
ENSECAG00000018148	SNRPN	100	99.167	ENSODEG00000013478	-	100	99.167	Octodon_degus
ENSECAG00000018148	SNRPN	100	98.750	ENSODEG00000020110	-	100	98.750	Octodon_degus
ENSECAG00000018148	SNRPN	100	99.170	ENSOCUG00000003532	-	100	99.170	Oryctolagus_cuniculus
ENSECAG00000018148	SNRPN	73	92.045	ENSORLG00020007490	SNRPN	69	93.452	Oryzias_latipes_hni
ENSECAG00000018148	SNRPN	73	92.045	ENSORLG00015003332	SNRPN	69	93.452	Oryzias_latipes_hsok
ENSECAG00000018148	SNRPN	73	92.614	ENSOMEG00000002066	SNRPN	69	94.048	Oryzias_melastigma
ENSECAG00000018148	SNRPN	100	99.583	ENSOGAG00000007392	SNRPN	100	99.583	Otolemur_garnettii
ENSECAG00000018148	SNRPN	100	99.167	ENSOARG00000009080	SNRPN	100	99.167	Ovis_aries
ENSECAG00000018148	SNRPN	100	99.583	ENSPPAG00000027650	SNRPN	100	99.583	Pan_paniscus
ENSECAG00000018148	SNRPN	97	68.803	ENSPPAG00000034049	-	86	71.770	Pan_paniscus
ENSECAG00000018148	SNRPN	85	64.390	ENSPPRG00000006957	-	73	70.861	Panthera_pardus
ENSECAG00000018148	SNRPN	100	100.000	ENSPPRG00000019878	-	100	100.000	Panthera_pardus
ENSECAG00000018148	SNRPN	100	99.583	ENSPTIG00000004537	SNRPN	100	99.583	Panthera_tigris_altaica
ENSECAG00000018148	SNRPN	97	69.231	ENSPTRG00000052400	-	65	80.420	Pan_troglodytes
ENSECAG00000018148	SNRPN	100	99.583	ENSPTRG00000006826	SNRPN	100	99.583	Pan_troglodytes
ENSECAG00000018148	SNRPN	100	99.583	ENSPANG00000020142	SNRPN	100	99.583	Papio_anubis
ENSECAG00000018148	SNRPN	100	99.583	ENSPEMG00000012911	-	100	99.583	Peromyscus_maniculatus_bairdii
ENSECAG00000018148	SNRPN	92	86.425	ENSPEMG00000013920	-	91	86.878	Peromyscus_maniculatus_bairdii
ENSECAG00000018148	SNRPN	95	95.175	ENSPEMG00000020979	-	95	95.175	Peromyscus_maniculatus_bairdii
ENSECAG00000018148	SNRPN	92	94.545	ENSPCIG00000004699	-	70	94.545	Phascolarctos_cinereus
ENSECAG00000018148	SNRPN	72	92.486	ENSPMEG00000020674	SNRPN	69	93.452	Poecilia_mexicana
ENSECAG00000018148	SNRPN	100	99.583	ENSPPYG00000006269	SNURF	100	99.583	Pongo_abelii
ENSECAG00000018148	SNRPN	100	99.583	ENSPCOG00000014231	SNRPN	100	99.583	Propithecus_coquereli
ENSECAG00000018148	SNRPN	100	99.583	ENSRNOG00000059764	Snrpn	100	99.583	Rattus_norvegicus
ENSECAG00000018148	SNRPN	100	99.583	ENSRBIG00000041765	SNRPN	100	99.583	Rhinopithecus_bieti
ENSECAG00000018148	SNRPN	100	99.583	ENSRROG00000035157	SNRPN	100	99.583	Rhinopithecus_roxellana
ENSECAG00000018148	SNRPN	100	99.583	ENSSBOG00000000110	-	100	99.583	Saimiri_boliviensis_boliviensis
ENSECAG00000018148	SNRPN	100	98.750	ENSSBOG00000024929	-	100	98.750	Saimiri_boliviensis_boliviensis
ENSECAG00000018148	SNRPN	92	94.118	ENSSHAG00000010257	-	91	94.118	Sarcophilus_harrisii
ENSECAG00000018148	SNRPN	99	78.243	ENSSARG00000000072	SNRPN	100	78.243	Sorex_araneus
ENSECAG00000018148	SNRPN	100	99.583	ENSSSCG00000028124	SNRPN	100	99.583	Sus_scrofa
ENSECAG00000018148	SNRPN	100	99.167	ENSTTRG00000010966	SNRPN	89	99.167	Tursiops_truncatus
ENSECAG00000018148	SNRPN	93	100.000	ENSUAMG00000016284	SNRPN	78	100.000	Ursus_americanus
ENSECAG00000018148	SNRPN	100	100.000	ENSUMAG00000025589	SNRPN	100	100.000	Ursus_maritimus
ENSECAG00000018148	SNRPN	95	100.000	ENSVVUG00000017971	SNRPN	94	100.000	Vulpes_vulpes