EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000018202 (Gene tree)
Gene ID: 100055348
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 11823 bases
Position: chr20:30801712-30813534
Accession: 100055348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000016976	tRNA-synt_1g	PF09334.11	1.4e-14	1	1
ENSECAP00000016976	Anticodon_1	PF08264.13	1.7e-30	1	1
ENSECAP00000016976	tRNA-synt_1	PF00133.22	4.6e-184	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000020674	VARS2-201	4121	-	ENSECAP00000016976	1062 (aa)	XP_005603748	F6UGH0

Gene Model

Click here to download ENSECAG00000018202's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000018202's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000018202	VARS2	92	52.266	ENSECAG00000014620	VARS	82	50.772

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000018202	VARS2	93	51.270	ENSAPOG00000007396	vars2	99	49.954	Acanthochromis_polyacanthus
ENSECAG00000018202	VARS2	99	90.274	ENSAMEG00000012997	VARS2	97	90.274	Ailuropoda_melanoleuca
ENSECAG00000018202	VARS2	99	51.692	ENSACIG00000004344	vars2	98	51.598	Amphilophus_citrinellus
ENSECAG00000018202	VARS2	94	51.852	ENSAOCG00000000476	vars2	97	50.371	Amphiprion_ocellaris
ENSECAG00000018202	VARS2	94	51.754	ENSAPEG00000008646	vars2	95	50.278	Amphiprion_percula
ENSECAG00000018202	VARS2	93	53.011	ENSATEG00000012291	vars2	96	52.354	Anabas_testudineus
ENSECAG00000018202	VARS2	97	58.729	ENSACAG00000022093	VARS2	97	58.539	Anolis_carolinensis
ENSECAG00000018202	VARS2	99	90.179	ENSANAG00000038018	VARS2	99	90.179	Aotus_nancymaae
ENSECAG00000018202	VARS2	99	51.022	ENSACLG00000018673	vars2	98	50.929	Astatotilapia_calliptera
ENSECAG00000018202	VARS2	96	53.092	ENSAMXG00000017773	vars2	97	54.337	Astyanax_mexicanus
ENSECAG00000018202	VARS2	99	92.315	ENSBTAG00000010698	VARS2	99	92.162	Bos_taurus
ENSECAG00000018202	VARS2	99	90.076	ENSCJAG00000019826	VARS2	99	90.076	Callithrix_jacchus
ENSECAG00000018202	VARS2	99	88.878	ENSCAFG00000000454	VARS2	99	88.878	Canis_familiaris
ENSECAG00000018202	VARS2	87	89.201	ENSCAFG00020019387	VARS2	95	89.236	Canis_lupus_dingo
ENSECAG00000018202	VARS2	99	92.133	ENSCHIG00000007847	VARS2	99	92.162	Capra_hircus
ENSECAG00000018202	VARS2	100	89.548	ENSTSYG00000009904	VARS2	99	89.548	Carlito_syrichta
ENSECAG00000018202	VARS2	88	85.806	ENSCAPG00000017770	VARS2	99	85.714	Cavia_aperea
ENSECAG00000018202	VARS2	99	85.122	ENSCPOG00000021834	VARS2	99	85.122	Cavia_porcellus
ENSECAG00000018202	VARS2	99	90.368	ENSCCAG00000037907	VARS2	99	90.368	Cebus_capucinus
ENSECAG00000018202	VARS2	100	91.243	ENSCATG00000032554	VARS2	99	91.243	Cercocebus_atys
ENSECAG00000018202	VARS2	99	85.782	ENSCLAG00000002889	VARS2	99	85.782	Chinchilla_lanigera
ENSECAG00000018202	VARS2	100	90.866	ENSCSAG00000008327	VARS2	99	90.866	Chlorocebus_sabaeus
ENSECAG00000018202	VARS2	91	62.667	ENSCPBG00000021502	VARS2	96	63.543	Chrysemys_picta_bellii
ENSECAG00000018202	VARS2	100	90.678	ENSCANG00000014991	VARS2	99	90.678	Colobus_angolensis_palliatus
ENSECAG00000018202	VARS2	99	84.447	ENSCGRG00001021535	Vars2	99	84.354	Cricetulus_griseus_chok1gshd
ENSECAG00000018202	VARS2	99	84.447	ENSCGRG00000014112	Vars2	99	84.354	Cricetulus_griseus_crigri
ENSECAG00000018202	VARS2	84	59.102	ENSCSEG00000015432	vars2	91	59.102	Cynoglossus_semilaevis
ENSECAG00000018202	VARS2	65	52.542	ENSCVAG00000017765	vars2	98	52.401	Cyprinodon_variegatus
ENSECAG00000018202	VARS2	98	51.643	ENSDARG00000056717	vars2	96	52.372	Danio_rerio
ENSECAG00000018202	VARS2	79	88.810	ENSDORG00000008516	Vars2	93	88.810	Dipodomys_ordii
ENSECAG00000018202	VARS2	99	77.673	ENSETEG00000014844	VARS2	99	77.673	Echinops_telfairi
ENSECAG00000018202	VARS2	100	98.023	ENSEASG00005019997	VARS2	97	98.023	Equus_asinus_asinus
ENSECAG00000018202	VARS2	67	83.495	ENSEEUG00000012591	-	67	83.495	Erinaceus_europaeus
ENSECAG00000018202	VARS2	93	52.321	ENSELUG00000017824	vars2	96	51.737	Esox_lucius
ENSECAG00000018202	VARS2	99	91.140	ENSFCAG00000010531	VARS2	99	91.140	Felis_catus
ENSECAG00000018202	VARS2	99	86.817	ENSFDAG00000017216	VARS2	99	86.817	Fukomys_damarensis
ENSECAG00000018202	VARS2	84	52.790	ENSFHEG00000013932	vars2	91	51.561	Fundulus_heteroclitus
ENSECAG00000018202	VARS2	88	55.789	ENSGMOG00000018960	vars2	98	55.684	Gadus_morhua
ENSECAG00000018202	VARS2	85	48.452	ENSGAFG00000004737	vars2	91	48.452	Gambusia_affinis
ENSECAG00000018202	VARS2	92	54.087	ENSGACG00000001464	vars2	99	54.289	Gasterosteus_aculeatus
ENSECAG00000018202	VARS2	91	63.185	ENSGAGG00000011652	VARS2	99	63.185	Gopherus_agassizii
ENSECAG00000018202	VARS2	100	90.584	ENSGGOG00000014587	VARS2	99	90.584	Gorilla_gorilla
ENSECAG00000018202	VARS2	99	49.441	ENSHBUG00000002448	vars2	99	49.348	Haplochromis_burtoni
ENSECAG00000018202	VARS2	99	84.840	ENSHGLG00000012886	VARS2	96	84.840	Heterocephalus_glaber_female
ENSECAG00000018202	VARS2	99	84.652	ENSHGLG00100016535	VARS2	99	84.652	Heterocephalus_glaber_male
ENSECAG00000018202	VARS2	68	50.202	ENSHCOG00000017907	vars2	94	52.321	Hippocampus_comes
ENSECAG00000018202	VARS2	91	54.728	ENSIPUG00000015573	Vars2	98	52.434	Ictalurus_punctatus
ENSECAG00000018202	VARS2	99	90.000	ENSSTOG00000009924	VARS2	99	90.000	Ictidomys_tridecemlineatus
ENSECAG00000018202	VARS2	100	84.746	ENSJJAG00000011144	Vars2	100	84.746	Jaculus_jaculus
ENSECAG00000018202	VARS2	93	52.110	ENSKMAG00000001393	vars2	96	51.431	Kryptolebias_marmoratus
ENSECAG00000018202	VARS2	95	52.031	ENSLBEG00000011949	vars2	96	51.524	Labrus_bergylta
ENSECAG00000018202	VARS2	52	63.604	ENSLBEG00000005480	-	81	63.587	Labrus_bergylta
ENSECAG00000018202	VARS2	95	52.754	ENSLACG00000001576	-	99	52.850	Latimeria_chalumnae
ENSECAG00000018202	VARS2	99	89.583	ENSLAFG00000015183	VARS2	99	89.583	Loxodonta_africana
ENSECAG00000018202	VARS2	100	90.395	ENSMFAG00000042367	VARS2	99	90.395	Macaca_fascicularis
ENSECAG00000018202	VARS2	100	90.490	ENSMMUG00000018609	VARS2	99	90.490	Macaca_mulatta
ENSECAG00000018202	VARS2	100	90.866	ENSMNEG00000043163	VARS2	99	90.866	Macaca_nemestrina
ENSECAG00000018202	VARS2	100	91.243	ENSMLEG00000041728	VARS2	97	91.243	Mandrillus_leucophaeus
ENSECAG00000018202	VARS2	95	50.818	ENSMAMG00000020339	vars2	96	50.623	Mastacembelus_armatus
ENSECAG00000018202	VARS2	99	50.929	ENSMZEG00005017669	vars2	98	50.836	Maylandia_zebra
ENSECAG00000018202	VARS2	99	84.934	ENSMAUG00000018946	Vars2	99	84.934	Mesocricetus_auratus
ENSECAG00000018202	VARS2	84	90.807	ENSMICG00000005365	VARS2	100	90.807	Microcebus_murinus
ENSECAG00000018202	VARS2	94	87.030	ENSMOCG00000014607	Vars2	99	87.030	Microtus_ochrogaster
ENSECAG00000018202	VARS2	91	52.733	ENSMMOG00000012122	vars2	97	50.956	Mola_mola
ENSECAG00000018202	VARS2	99	76.249	ENSMODG00000015848	VARS2	99	76.249	Monodelphis_domestica
ENSECAG00000018202	VARS2	93	53.082	ENSMALG00000009217	vars2	98	52.982	Monopterus_albus
ENSECAG00000018202	VARS2	99	85.391	MGP_CAROLIEiJ_G0021529	Vars2	99	85.391	Mus_caroli
ENSECAG00000018202	VARS2	99	85.014	ENSMUSG00000038838	Vars2	99	85.014	Mus_musculus
ENSECAG00000018202	VARS2	99	85.391	MGP_PahariEiJ_G0020523	Vars2	99	85.391	Mus_pahari
ENSECAG00000018202	VARS2	99	85.108	MGP_SPRETEiJ_G0022436	Vars2	99	85.108	Mus_spretus
ENSECAG00000018202	VARS2	99	90.104	ENSMPUG00000011643	VARS2	99	90.104	Mustela_putorius_furo
ENSECAG00000018202	VARS2	100	87.966	ENSMLUG00000002356	VARS2	97	87.966	Myotis_lucifugus
ENSECAG00000018202	VARS2	99	77.926	ENSNGAG00000020607	Vars2	99	77.799	Nannospalax_galili
ENSECAG00000018202	VARS2	61	50.964	ENSNBRG00000001624	vars2	58	53.039	Neolamprologus_brichardi
ENSECAG00000018202	VARS2	100	86.911	ENSNLEG00000005625	VARS2	97	86.911	Nomascus_leucogenys
ENSECAG00000018202	VARS2	78	73.790	ENSMEUG00000014475	VARS2	90	73.790	Notamacropus_eugenii
ENSECAG00000018202	VARS2	89	82.320	ENSOPRG00000000682	VARS2	90	82.442	Ochotona_princeps
ENSECAG00000018202	VARS2	99	83.992	ENSODEG00000017965	VARS2	99	83.992	Octodon_degus
ENSECAG00000018202	VARS2	93	38.536	ENSONIG00000004734	vars2	98	38.688	Oreochromis_niloticus
ENSECAG00000018202	VARS2	75	88.235	ENSOANG00000000398	-	98	88.235	Ornithorhynchus_anatinus
ENSECAG00000018202	VARS2	99	81.058	ENSOCUG00000021496	VARS2	64	81.530	Oryctolagus_cuniculus
ENSECAG00000018202	VARS2	92	53.128	ENSORLG00000010632	vars2	95	51.890	Oryzias_latipes
ENSECAG00000018202	VARS2	92	52.819	ENSORLG00020018584	vars2	97	51.555	Oryzias_latipes_hni
ENSECAG00000018202	VARS2	92	52.315	ENSORLG00015010408	vars2	96	51.187	Oryzias_latipes_hsok
ENSECAG00000018202	VARS2	91	53.761	ENSOMEG00000008360	vars2	97	51.782	Oryzias_melastigma
ENSECAG00000018202	VARS2	99	89.727	ENSOGAG00000006087	VARS2	97	89.727	Otolemur_garnettii
ENSECAG00000018202	VARS2	99	91.098	ENSOARG00000010844	VARS2	98	91.132	Ovis_aries
ENSECAG00000018202	VARS2	100	90.678	ENSPPAG00000041141	VARS2	99	90.678	Pan_paniscus
ENSECAG00000018202	VARS2	99	90.952	ENSPPRG00000006751	VARS2	97	90.952	Panthera_pardus
ENSECAG00000018202	VARS2	99	90.858	ENSPTIG00000017799	VARS2	98	91.859	Panthera_tigris_altaica
ENSECAG00000018202	VARS2	100	90.678	ENSPTRG00000034497	VARS2	99	90.678	Pan_troglodytes
ENSECAG00000018202	VARS2	100	91.243	ENSPANG00000018481	VARS2	100	91.384	Papio_anubis
ENSECAG00000018202	VARS2	95	54.892	ENSPKIG00000011372	vars2	99	53.853	Paramormyrops_kingsleyae
ENSECAG00000018202	VARS2	59	68.304	ENSPSIG00000006206	VARS2	92	67.747	Pelodiscus_sinensis
ENSECAG00000018202	VARS2	97	52.453	ENSPMGG00000000465	vars2	98	52.363	Periophthalmus_magnuspinnatus
ENSECAG00000018202	VARS2	99	85.283	ENSPEMG00000014691	Vars2	99	85.283	Peromyscus_maniculatus_bairdii
ENSECAG00000018202	VARS2	99	77.883	ENSPCIG00000015040	VARS2	99	77.883	Phascolarctos_cinereus
ENSECAG00000018202	VARS2	92	52.277	ENSPFOG00000017616	vars2	95	51.556	Poecilia_formosa
ENSECAG00000018202	VARS2	92	52.234	ENSPLAG00000019778	vars2	99	49.954	Poecilia_latipinna
ENSECAG00000018202	VARS2	92	52.024	ENSPMEG00000011123	vars2	95	51.309	Poecilia_mexicana
ENSECAG00000018202	VARS2	89	47.477	ENSPREG00000014998	vars2	93	46.425	Poecilia_reticulata
ENSECAG00000018202	VARS2	100	90.866	ENSPPYG00000016424	VARS2	99	90.866	Pongo_abelii
ENSECAG00000018202	VARS2	84	85.030	ENSPCAG00000006946	VARS2	84	85.030	Procavia_capensis
ENSECAG00000018202	VARS2	99	89.662	ENSPCOG00000014839	VARS2	97	89.662	Propithecus_coquereli
ENSECAG00000018202	VARS2	100	90.584	ENSPVAG00000004197	VARS2	99	90.584	Pteropus_vampyrus
ENSECAG00000018202	VARS2	83	61.290	ENSPNYG00000010314	vars2	98	61.290	Pundamilia_nyererei
ENSECAG00000018202	VARS2	94	54.352	ENSPNAG00000026793	vars2	95	54.155	Pygocentrus_nattereri
ENSECAG00000018202	VARS2	99	84.826	ENSRNOG00000000833	Vars2	99	84.826	Rattus_norvegicus
ENSECAG00000018202	VARS2	100	90.584	ENSRBIG00000032725	VARS2	99	90.584	Rhinopithecus_bieti
ENSECAG00000018202	VARS2	100	90.584	ENSRROG00000043847	VARS2	99	90.584	Rhinopithecus_roxellana
ENSECAG00000018202	VARS2	99	87.697	ENSSBOG00000033240	VARS2	97	87.697	Saimiri_boliviensis_boliviensis
ENSECAG00000018202	VARS2	99	76.276	ENSSHAG00000009307	VARS2	100	76.276	Sarcophilus_harrisii
ENSECAG00000018202	VARS2	96	53.765	ENSSFOG00015016187	vars2	98	52.947	Scleropages_formosus
ENSECAG00000018202	VARS2	92	53.447	ENSSMAG00000020842	vars2	98	52.038	Scophthalmus_maximus
ENSECAG00000018202	VARS2	93	52.055	ENSSDUG00000011598	vars2	97	51.469	Seriola_dumerili
ENSECAG00000018202	VARS2	91	53.381	ENSSLDG00000015492	vars2	95	51.094	Seriola_lalandi_dorsalis
ENSECAG00000018202	VARS2	57	90.511	ENSSARG00000003786	-	69	90.511	Sorex_araneus
ENSECAG00000018202	VARS2	88	60.726	ENSSPUG00000014700	VARS2	94	60.726	Sphenodon_punctatus
ENSECAG00000018202	VARS2	93	50.596	ENSSPAG00000004654	vars2	97	48.211	Stegastes_partitus
ENSECAG00000018202	VARS2	99	91.989	ENSSSCG00000001384	VARS2	99	92.020	Sus_scrofa
ENSECAG00000018202	VARS2	94	53.333	ENSTRUG00000005264	vars2	95	52.780	Takifugu_rubripes
ENSECAG00000018202	VARS2	99	51.495	ENSTNIG00000005916	vars2	99	52.048	Tetraodon_nigroviridis
ENSECAG00000018202	VARS2	52	95.522	ENSTBEG00000007976	-	53	95.522	Tupaia_belangeri
ENSECAG00000018202	VARS2	93	92.377	ENSTTRG00000012243	VARS2	93	92.377	Tursiops_truncatus
ENSECAG00000018202	VARS2	99	89.340	ENSUAMG00000026124	VARS2	99	90.642	Ursus_americanus
ENSECAG00000018202	VARS2	99	90.274	ENSUMAG00000019894	VARS2	99	90.274	Ursus_maritimus
ENSECAG00000018202	VARS2	99	89.444	ENSVVUG00000010754	VARS2	95	89.444	Vulpes_vulpes
ENSECAG00000018202	VARS2	89	54.725	ENSXETG00000003036	vars2	99	54.725	Xenopus_tropicalis
ENSECAG00000018202	VARS2	89	54.079	ENSXCOG00000003455	vars2	96	51.863	Xiphophorus_couchianus
ENSECAG00000018202	VARS2	92	51.536	ENSXMAG00000013523	vars2	98	49.305	Xiphophorus_maculatus