EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000018264 (Gene tree)
Gene ID: 100054875
Gene Symbol: TRANK1
Alias: -
Full Name: tetratricopeptide repeat and ankyrin repeat containing 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 97434 bases
Position: chr16:49729533-49826966
Accession: 56855
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000015859	UvrD-helicase	PF00580.21	7.3e-05	1	1
ENSECAP00000032815	UvrD-helicase	PF00580.21	7.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000019382	-	9949	XM_023620747	ENSECAP00000015859	2982 (aa)	XP_023476515	F7CIR4
ENSECAT00000047556	-	9967	XM_005600832	ENSECAP00000032815	2988 (aa)	XP_005600889	UPI0003ACB8A5

Gene Model

Click here to download ENSECAG00000018264's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000018264's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000018264	TRANK1	83	58.737	ENSAPLG00000010356	TRANK1	99	58.449	Anas_platyrhynchos
ENSECAG00000018264	TRANK1	55	85.714	ENSCAFG00020001387	TRANK1	99	85.471	Canis_lupus_dingo
ENSECAG00000018264	TRANK1	98	83.214	ENSTSYG00000025860	TRANK1	99	83.282	Carlito_syrichta
ENSECAG00000018264	TRANK1	98	80.736	ENSCLAG00000003643	TRANK1	99	80.634	Chinchilla_lanigera
ENSECAG00000018264	TRANK1	99	63.618	ENSCPBG00000013529	TRANK1	99	64.673	Chrysemys_picta_bellii
ENSECAG00000018264	TRANK1	98	85.242	ENSCANG00000039915	TRANK1	99	85.344	Colobus_angolensis_palliatus
ENSECAG00000018264	TRANK1	98	81.542	ENSDNOG00000003573	TRANK1	99	81.508	Dasypus_novemcinctus
ENSECAG00000018264	TRANK1	100	98.759	ENSEASG00005007374	TRANK1	100	99.577	Equus_asinus_asinus
ENSECAG00000018264	TRANK1	81	79.967	ENSEEUG00000008528	TRANK1	99	79.967	Erinaceus_europaeus
ENSECAG00000018264	TRANK1	99	57.571	ENSFALG00000002875	TRANK1	99	57.532	Ficedula_albicollis
ENSECAG00000018264	TRANK1	74	61.522	ENSGALG00000037629	TRANK1	100	61.108	Gallus_gallus
ENSECAG00000018264	TRANK1	89	63.988	ENSGAGG00000009012	TRANK1	100	63.853	Gopherus_agassizii
ENSECAG00000018264	TRANK1	99	47.885	ENSLOCG00000004808	TRANK1	100	47.849	Lepisosteus_oculatus
ENSECAG00000018264	TRANK1	98	57.971	ENSMGAG00000011934	TRANK1	99	57.615	Meleagris_gallopavo
ENSECAG00000018264	TRANK1	98	83.958	ENSMLUG00000003537	TRANK1	99	83.958	Myotis_lucifugus
ENSECAG00000018264	TRANK1	98	80.293	ENSODEG00000003882	TRANK1	97	80.293	Octodon_degus
ENSECAG00000018264	TRANK1	99	62.708	ENSPSIG00000010217	TRANK1	100	62.591	Pelodiscus_sinensis
ENSECAG00000018264	TRANK1	65	74.342	ENSPCAG00000002172	-	87	74.342	Procavia_capensis
ENSECAG00000018264	TRANK1	80	78.049	ENSPVAG00000004199	TRANK1	100	77.917	Pteropus_vampyrus
ENSECAG00000018264	TRANK1	100	85.466	ENSRBIG00000012281	TRANK1	99	85.617	Rhinopithecus_bieti
ENSECAG00000018264	TRANK1	98	85.549	ENSRROG00000044487	TRANK1	99	85.651	Rhinopithecus_roxellana
ENSECAG00000018264	TRANK1	60	88.076	ENSSARG00000007861	-	74	88.076	Sorex_araneus
ENSECAG00000018264	TRANK1	72	67.448	ENSSPUG00000015974	TRANK1	94	75.755	Sphenodon_punctatus
ENSECAG00000018264	TRANK1	82	59.316	ENSTGUG00000005694	TRANK1	100	59.365	Taeniopygia_guttata
ENSECAG00000018264	TRANK1	55	86.943	ENSUAMG00000027609	-	99	86.943	Ursus_americanus
ENSECAG00000018264	TRANK1	55	85.784	ENSUMAG00000006416	TRANK1	99	85.784	Ursus_maritimus
ENSECAG00000018264	TRANK1	55	85.471	ENSVVUG00000007788	TRANK1	99	85.228	Vulpes_vulpes