EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000018274 (Gene tree)
Gene ID: 102148790
Gene Symbol: FAM172A
Alias: -
Full Name: family with sequence similarity 172 member A
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 396136 bases
Position: chr14:74349073-74745208
Accession: 17826
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000015929	Arb2	PF09757.9	1.3e-09	1	1
ENSECAP00000046421	Arb2	PF09757.9	1.8e-09	1	1
ENSECAP00000030470	Arb2	PF09757.9	2.6e-09	1	1
ENSECAP00000032888	Arb2	PF09757.9	3e-09	1	1
ENSECAP00000038759	Arb2	PF09757.9	3.3e-09	1	1
ENSECAP00000045090	Arb2	PF09757.9	3.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000064034	-	1386	-	ENSECAP00000030470	461 (aa)	-	-
ENSECAT00000038872	-	1374	-	ENSECAP00000037570	457 (aa)	-	-
ENSECAT00000052127	-	2272	-	ENSECAP00000043280	423 (aa)	-	-
ENSECAT00000062660	-	1488	-	ENSECAP00000038759	495 (aa)	-	-
ENSECAT00000032921	-	2299	-	ENSECAP00000025580	432 (aa)	-	-
ENSECAT00000042259	-	2396	-	ENSECAP00000046421	416 (aa)	XP_023473784	UPI000C9E2D70
ENSECAT00000019460	-	1464	-	ENSECAP00000015929	375 (aa)	-	F7CUH0
ENSECAT00000044434	-	2491	-	ENSECAP00000045090	496 (aa)	-	-
ENSECAT00000044246	-	1443	-	ENSECAP00000032888	480 (aa)	-	-
ENSECAT00000038874	-	2425	-	ENSECAP00000031022	474 (aa)	-	-

Gene Model

Click here to download ENSECAG00000018274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000018274's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000018274	FAM172A	97	94.568	ENSG00000113391	FAM172A	100	96.203	Homo_sapiens
ENSECAG00000018274	FAM172A	100	84.856	ENSAPLG00000004055	FAM172A	97	85.891	Anas_platyrhynchos
ENSECAG00000018274	FAM172A	50	42.328	ENSAPLG00000011555	-	91	40.183	Anas_platyrhynchos
ENSECAG00000018274	FAM172A	98	86.721	ENSACAG00000013305	FAM172A	95	86.885	Anolis_carolinensis
ENSECAG00000018274	FAM172A	97	87.805	ENSANAG00000035869	FAM172A	91	87.805	Aotus_nancymaae
ENSECAG00000018274	FAM172A	98	96.748	ENSBTAG00000050195	FAM172A	97	95.062	Bos_taurus
ENSECAG00000018274	FAM172A	98	96.477	ENSCJAG00000010444	FAM172A	97	95.062	Callithrix_jacchus
ENSECAG00000018274	FAM172A	98	97.019	ENSCAFG00000008064	FAM172A	99	97.027	Canis_familiaris
ENSECAG00000018274	FAM172A	98	97.019	ENSCAFG00020006210	FAM172A	97	95.062	Canis_lupus_dingo
ENSECAG00000018274	FAM172A	98	96.748	ENSCHIG00000008440	FAM172A	97	94.815	Capra_hircus
ENSECAG00000018274	FAM172A	71	96.241	ENSTSYG00000006286	FAM172A	85	96.241	Carlito_syrichta
ENSECAG00000018274	FAM172A	60	85.841	ENSCAPG00000014103	-	100	85.841	Cavia_aperea
ENSECAG00000018274	FAM172A	98	96.206	ENSCCAG00000023116	FAM172A	100	94.865	Cebus_capucinus
ENSECAG00000018274	FAM172A	98	95.393	ENSCLAG00000005472	FAM172A	100	97.468	Chinchilla_lanigera
ENSECAG00000018274	FAM172A	85	44.954	ENSCPBG00000004402	-	92	43.539	Chrysemys_picta_bellii
ENSECAG00000018274	FAM172A	72	94.424	ENSCANG00000040412	FAM172A	92	94.444	Colobus_angolensis_palliatus
ENSECAG00000018274	FAM172A	98	96.477	ENSDNOG00000004689	FAM172A	97	94.815	Dasypus_novemcinctus
ENSECAG00000018274	FAM172A	73	93.796	ENSDORG00000013558	Fam172a	89	94.834	Dipodomys_ordii
ENSECAG00000018274	FAM172A	83	38.710	ENSEBUG00000016097	-	62	39.697	Eptatretus_burgeri
ENSECAG00000018274	FAM172A	96	82.750	ENSEEUG00000002887	FAM172A	97	82.469	Erinaceus_europaeus
ENSECAG00000018274	FAM172A	96	70.278	ENSELUG00000017647	fam172a	95	68.564	Esox_lucius
ENSECAG00000018274	FAM172A	98	97.019	ENSFCAG00000025443	FAM172A	97	95.556	Felis_catus
ENSECAG00000018274	FAM172A	84	44.886	ENSFALG00000006501	-	98	44.886	Ficedula_albicollis
ENSECAG00000018274	FAM172A	95	87.324	ENSFALG00000009072	FAM172A	95	87.606	Ficedula_albicollis
ENSECAG00000018274	FAM172A	100	84.375	ENSGALG00000014661	FAM172A	97	85.891	Gallus_gallus
ENSECAG00000018274	FAM172A	82	46.302	ENSGAGG00000022828	-	89	44.706	Gopherus_agassizii
ENSECAG00000018274	FAM172A	100	88.942	ENSGAGG00000003839	FAM172A	97	89.851	Gopherus_agassizii
ENSECAG00000018274	FAM172A	97	94.321	ENSGGOG00000010296	FAM172A	97	94.321	Gorilla_gorilla
ENSECAG00000018274	FAM172A	95	95.531	ENSHGLG00000011178	FAM172A	100	96.203	Heterocephalus_glaber_female
ENSECAG00000018274	FAM172A	96	95.543	ENSHGLG00100013340	FAM172A	100	96.203	Heterocephalus_glaber_male
ENSECAG00000018274	FAM172A	98	96.477	ENSSTOG00000009918	FAM172A	97	94.815	Ictidomys_tridecemlineatus
ENSECAG00000018274	FAM172A	87	49.390	ENSLACG00000001532	si:ch73-41e3.7	92	49.425	Latimeria_chalumnae
ENSECAG00000018274	FAM172A	98	75.339	ENSLOCG00000001629	fam172a	97	73.827	Lepisosteus_oculatus
ENSECAG00000018274	FAM172A	72	94.424	ENSMFAG00000001171	FAM172A	92	94.444	Macaca_fascicularis
ENSECAG00000018274	FAM172A	94	92.688	ENSMNEG00000039938	FAM172A	99	92.688	Macaca_nemestrina
ENSECAG00000018274	FAM172A	100	95.433	ENSMICG00000030403	FAM172A	99	95.195	Microcebus_murinus
ENSECAG00000018274	FAM172A	89	91.622	ENSMOCG00000003613	Fam172a	100	91.622	Microtus_ochrogaster
ENSECAG00000018274	FAM172A	100	88.221	ENSMODG00000020131	FAM172A	97	88.861	Monodelphis_domestica
ENSECAG00000018274	FAM172A	75	93.671	MGP_PahariEiJ_G0015818	Fam172a	100	93.671	Mus_pahari
ENSECAG00000018274	FAM172A	89	94.595	ENSNGAG00000019570	Fam172a	100	94.595	Nannospalax_galili
ENSECAG00000018274	FAM172A	73	93.455	ENSNLEG00000013903	FAM172A	90	93.455	Nomascus_leucogenys
ENSECAG00000018274	FAM172A	98	87.534	ENSOANG00000011068	FAM172A	95	89.888	Ornithorhynchus_anatinus
ENSECAG00000018274	FAM172A	98	96.477	ENSOCUG00000007299	FAM172A	94	95.431	Oryctolagus_cuniculus
ENSECAG00000018274	FAM172A	98	96.206	ENSOGAG00000015189	FAM172A	97	94.568	Otolemur_garnettii
ENSECAG00000018274	FAM172A	99	96.496	ENSOARG00000016711	FAM172A	85	96.496	Ovis_aries
ENSECAG00000018274	FAM172A	72	94.796	ENSPPAG00000030542	FAM172A	92	94.815	Pan_paniscus
ENSECAG00000018274	FAM172A	98	97.019	ENSPPRG00000006653	FAM172A	97	95.556	Panthera_pardus
ENSECAG00000018274	FAM172A	98	97.019	ENSPTIG00000012681	FAM172A	99	95.662	Panthera_tigris_altaica
ENSECAG00000018274	FAM172A	72	94.796	ENSPTRG00000017074	FAM172A	92	94.815	Pan_troglodytes
ENSECAG00000018274	FAM172A	72	94.424	ENSPANG00000011687	FAM172A	92	94.444	Papio_anubis
ENSECAG00000018274	FAM172A	98	72.703	ENSPKIG00000012314	fam172a	91	92.647	Paramormyrops_kingsleyae
ENSECAG00000018274	FAM172A	100	91.827	ENSPEMG00000009604	-	100	96.203	Peromyscus_maniculatus_bairdii
ENSECAG00000018274	FAM172A	100	88.462	ENSPCIG00000028612	FAM172A	97	89.356	Phascolarctos_cinereus
ENSECAG00000018274	FAM172A	55	93.886	ENSPCOG00000024072	FAM172A	93	93.886	Propithecus_coquereli
ENSECAG00000018274	FAM172A	72	91.822	ENSRNOG00000013844	Fam172a	99	91.822	Rattus_norvegicus
ENSECAG00000018274	FAM172A	72	94.424	ENSRROG00000023807	FAM172A	92	94.444	Rhinopithecus_roxellana
ENSECAG00000018274	FAM172A	98	96.748	ENSSBOG00000019860	FAM172A	97	95.309	Saimiri_boliviensis_boliviensis
ENSECAG00000018274	FAM172A	100	87.740	ENSSHAG00000013743	FAM172A	97	88.366	Sarcophilus_harrisii
ENSECAG00000018274	FAM172A	98	87.805	ENSSPUG00000008161	FAM172A	97	86.386	Sphenodon_punctatus
ENSECAG00000018274	FAM172A	100	95.192	ENSSSCG00000027608	FAM172A	100	95.405	Sus_scrofa
ENSECAG00000018274	FAM172A	89	87.087	ENSTGUG00000000715	FAM172A	100	83.947	Taeniopygia_guttata
ENSECAG00000018274	FAM172A	81	47.249	ENSTGUG00000013623	-	100	46.131	Taeniopygia_guttata
ENSECAG00000018274	FAM172A	87	57.273	ENSTNIG00000009902	fam172a	99	59.337	Tetraodon_nigroviridis
ENSECAG00000018274	FAM172A	98	95.122	ENSTTRG00000001521	FAM172A	97	92.346	Tursiops_truncatus
ENSECAG00000018274	FAM172A	99	96.765	ENSUMAG00000005442	FAM172A	99	96.757	Ursus_maritimus
ENSECAG00000018274	FAM172A	98	97.019	ENSVVUG00000022112	FAM172A	98	97.019	Vulpes_vulpes
ENSECAG00000018274	FAM172A	91	44.271	ENSXETG00000033027	-	99	44.503	Xenopus_tropicalis
ENSECAG00000018274	FAM172A	96	82.094	ENSXETG00000011592	fam172a	96	79.310	Xenopus_tropicalis