EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000018303 (Gene tree)
Gene ID: 100066303
Gene Symbol: YTHDC1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 35153 bases
Position: chr3:68340274-68375426
Accession: 25113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000034551	YTH	PF04146.15	2.4e-40	1	1
ENSECAP00000037141	YTH	PF04146.15	3.3e-40	1	1
ENSECAP00000016239	YTH	PF04146.15	3.5e-40	1	1
ENSECAP00000036225	YTH	PF04146.15	3.9e-40	1	1
ENSECAP00000037578	YTH	PF04146.15	4e-40	1	1
ENSECAP00000016272	YTH	PF04146.15	4.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000019810	-	2200	-	ENSECAP00000016239	679 (aa)	-	F6ZA01
ENSECAT00000059284	-	2836	-	ENSECAP00000037578	738 (aa)	-	-
ENSECAT00000019849	-	2346	-	ENSECAP00000016272	781 (aa)	-	F7BPG4
ENSECAT00000065030	-	2605	-	ENSECAP00000037141	661 (aa)	-	-
ENSECAT00000041269	-	1626	-	ENSECAP00000034551	541 (aa)	-	-
ENSECAT00000042672	-	2812	-	ENSECAP00000036225	730 (aa)	XP_001501576	UPI000C9E29A5

Gene Model

Click here to download ENSECAG00000018303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000018303's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000018303	YTHDC1	100	97.538	ENSG00000083896	YTHDC1	100	97.538	Homo_sapiens
ENSECAG00000018303	YTHDC1	56	65.994	ENSAPOG00000013997	ythdc1	70	65.957	Acanthochromis_polyacanthus
ENSECAG00000018303	YTHDC1	100	99.041	ENSAMEG00000005688	YTHDC1	100	99.041	Ailuropoda_melanoleuca
ENSECAG00000018303	YTHDC1	65	70.312	ENSACIG00000019728	ythdc1	80	60.048	Amphilophus_citrinellus
ENSECAG00000018303	YTHDC1	56	67.935	ENSAOCG00000000239	ythdc1	72	70.202	Amphiprion_ocellaris
ENSECAG00000018303	YTHDC1	53	66.391	ENSAPEG00000000618	ythdc1	66	72.340	Amphiprion_percula
ENSECAG00000018303	YTHDC1	55	74.744	ENSATEG00000023007	ythdc1	80	69.663	Anabas_testudineus
ENSECAG00000018303	YTHDC1	97	81.250	ENSAPLG00000009921	YTHDC1	86	85.144	Anas_platyrhynchos
ENSECAG00000018303	YTHDC1	99	81.447	ENSACAG00000009697	YTHDC1	93	83.752	Anolis_carolinensis
ENSECAG00000018303	YTHDC1	100	97.538	ENSANAG00000001522	YTHDC1	100	97.538	Aotus_nancymaae
ENSECAG00000018303	YTHDC1	78	66.304	ENSACLG00000019371	ythdc1	92	69.192	Astatotilapia_calliptera
ENSECAG00000018303	YTHDC1	80	86.835	ENSAMXG00000006978	ythdc1	80	85.255	Astyanax_mexicanus
ENSECAG00000018303	YTHDC1	100	97.808	ENSBTAG00000015572	YTHDC1	100	97.808	Bos_taurus
ENSECAG00000018303	YTHDC1	100	97.948	ENSCJAG00000009934	YTHDC1	100	97.948	Callithrix_jacchus
ENSECAG00000018303	YTHDC1	100	99.315	ENSCAFG00000002821	YTHDC1	100	99.315	Canis_familiaris
ENSECAG00000018303	YTHDC1	100	99.315	ENSCAFG00020027112	YTHDC1	100	99.315	Canis_lupus_dingo
ENSECAG00000018303	YTHDC1	98	92.628	ENSCHIG00000004810	YTHDC1	95	91.871	Capra_hircus
ENSECAG00000018303	YTHDC1	100	97.674	ENSTSYG00000011668	YTHDC1	100	97.674	Carlito_syrichta
ENSECAG00000018303	YTHDC1	79	90.476	ENSCAPG00000008722	YTHDC1	90	89.680	Cavia_aperea
ENSECAG00000018303	YTHDC1	99	96.097	ENSCPOG00000010929	YTHDC1	100	90.150	Cavia_porcellus
ENSECAG00000018303	YTHDC1	100	97.674	ENSCCAG00000035754	YTHDC1	100	97.674	Cebus_capucinus
ENSECAG00000018303	YTHDC1	100	97.583	ENSCATG00000036320	YTHDC1	100	96.617	Cercocebus_atys
ENSECAG00000018303	YTHDC1	100	96.073	ENSCLAG00000005482	YTHDC1	99	93.897	Chinchilla_lanigera
ENSECAG00000018303	YTHDC1	100	97.674	ENSCSAG00000005252	YTHDC1	100	97.674	Chlorocebus_sabaeus
ENSECAG00000018303	YTHDC1	99	83.364	ENSCPBG00000021965	YTHDC1	88	96.111	Chrysemys_picta_bellii
ENSECAG00000018303	YTHDC1	100	97.811	ENSCANG00000004769	YTHDC1	100	97.811	Colobus_angolensis_palliatus
ENSECAG00000018303	YTHDC1	100	93.297	ENSCGRG00001000816	Ythdc1	100	93.297	Cricetulus_griseus_chok1gshd
ENSECAG00000018303	YTHDC1	99	95.706	ENSCGRG00000009807	Ythdc1	99	95.706	Cricetulus_griseus_crigri
ENSECAG00000018303	YTHDC1	61	60.793	ENSCSEG00000020404	ythdc1	67	69.367	Cynoglossus_semilaevis
ENSECAG00000018303	YTHDC1	61	60.089	ENSCVAG00000022349	ythdc1	73	70.079	Cyprinodon_variegatus
ENSECAG00000018303	YTHDC1	80	85.434	ENSDARG00000051953	ythdc1	80	83.914	Danio_rerio
ENSECAG00000018303	YTHDC1	100	95.765	ENSDNOG00000004949	YTHDC1	100	95.765	Dasypus_novemcinctus
ENSECAG00000018303	YTHDC1	100	97.054	ENSDORG00000013045	Ythdc1	100	97.083	Dipodomys_ordii
ENSECAG00000018303	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	70	100.000	Echinops_telfairi
ENSECAG00000018303	YTHDC1	100	99.452	ENSEASG00005018383	YTHDC1	100	99.452	Equus_asinus_asinus
ENSECAG00000018303	YTHDC1	100	96.438	ENSEEUG00000015466	YTHDC1	100	96.438	Erinaceus_europaeus
ENSECAG00000018303	YTHDC1	98	60.589	ENSELUG00000014029	ythdc1	53	81.870	Esox_lucius
ENSECAG00000018303	YTHDC1	100	98.767	ENSFCAG00000026791	YTHDC1	100	98.767	Felis_catus
ENSECAG00000018303	YTHDC1	68	89.679	ENSFALG00000006581	YTHDC1	87	97.449	Ficedula_albicollis
ENSECAG00000018303	YTHDC1	100	96.176	ENSFDAG00000018560	YTHDC1	100	96.394	Fukomys_damarensis
ENSECAG00000018303	YTHDC1	64	67.857	ENSFHEG00000001286	ythdc1	58	58.621	Fundulus_heteroclitus
ENSECAG00000018303	YTHDC1	63	64.539	ENSGMOG00000018815	ythdc1	71	77.833	Gadus_morhua
ENSECAG00000018303	YTHDC1	99	82.397	ENSGALG00000035906	YTHDC1	80	84.665	Gallus_gallus
ENSECAG00000018303	YTHDC1	73	64.918	ENSGAFG00000001759	ythdc1	72	67.658	Gambusia_affinis
ENSECAG00000018303	YTHDC1	61	63.084	ENSGACG00000015486	ythdc1	52	68.378	Gasterosteus_aculeatus
ENSECAG00000018303	YTHDC1	99	83.271	ENSGAGG00000007108	YTHDC1	81	95.833	Gopherus_agassizii
ENSECAG00000018303	YTHDC1	100	97.432	ENSGGOG00000021958	YTHDC1	100	96.617	Gorilla_gorilla
ENSECAG00000018303	YTHDC1	78	66.304	ENSHBUG00000019288	ythdc1	92	69.192	Haplochromis_burtoni
ENSECAG00000018303	YTHDC1	100	95.770	ENSHGLG00000006319	-	100	95.129	Heterocephalus_glaber_female
ENSECAG00000018303	YTHDC1	98	68.738	ENSHGLG00000003239	-	82	74.603	Heterocephalus_glaber_female
ENSECAG00000018303	YTHDC1	100	95.238	ENSHGLG00100001556	-	100	95.238	Heterocephalus_glaber_male
ENSECAG00000018303	YTHDC1	98	66.854	ENSHGLG00100008060	-	82	74.603	Heterocephalus_glaber_male
ENSECAG00000018303	YTHDC1	53	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSECAG00000018303	YTHDC1	80	86.517	ENSIPUG00000018136	ythdc1	79	84.987	Ictalurus_punctatus
ENSECAG00000018303	YTHDC1	100	96.482	ENSSTOG00000013652	YTHDC1	100	96.482	Ictidomys_tridecemlineatus
ENSECAG00000018303	YTHDC1	98	89.015	ENSJJAG00000010268	Ythdc1	93	90.222	Jaculus_jaculus
ENSECAG00000018303	YTHDC1	61	60.959	ENSKMAG00000006483	ythdc1	85	65.525	Kryptolebias_marmoratus
ENSECAG00000018303	YTHDC1	64	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSECAG00000018303	YTHDC1	92	74.881	ENSLACG00000004893	YTHDC1	92	75.078	Latimeria_chalumnae
ENSECAG00000018303	YTHDC1	96	70.058	ENSLOCG00000003045	ythdc1	92	89.183	Lepisosteus_oculatus
ENSECAG00000018303	YTHDC1	100	95.399	ENSLAFG00000021592	YTHDC1	100	96.919	Loxodonta_africana
ENSECAG00000018303	YTHDC1	100	97.583	ENSMFAG00000031927	YTHDC1	100	96.752	Macaca_fascicularis
ENSECAG00000018303	YTHDC1	100	97.811	ENSMMUG00000002265	YTHDC1	100	97.811	Macaca_mulatta
ENSECAG00000018303	YTHDC1	100	97.811	ENSMNEG00000033751	YTHDC1	100	97.811	Macaca_nemestrina
ENSECAG00000018303	YTHDC1	100	97.674	ENSMLEG00000042147	YTHDC1	100	97.674	Mandrillus_leucophaeus
ENSECAG00000018303	YTHDC1	59	62.350	ENSMAMG00000013122	ythdc1	54	71.279	Mastacembelus_armatus
ENSECAG00000018303	YTHDC1	78	66.304	ENSMZEG00005023173	ythdc1	92	69.192	Maylandia_zebra
ENSECAG00000018303	YTHDC1	99	80.855	ENSMGAG00000010391	YTHDC1	85	85.304	Meleagris_gallopavo
ENSECAG00000018303	YTHDC1	100	93.023	ENSMAUG00000001286	Ythdc1	100	93.023	Mesocricetus_auratus
ENSECAG00000018303	YTHDC1	100	97.500	ENSMICG00000034640	YTHDC1	100	96.617	Microcebus_murinus
ENSECAG00000018303	YTHDC1	100	95.468	ENSMOCG00000020201	Ythdc1	100	93.297	Microtus_ochrogaster
ENSECAG00000018303	YTHDC1	54	61.842	ENSMMOG00000021200	ythdc1	86	55.297	Mola_mola
ENSECAG00000018303	YTHDC1	51	61.176	ENSMODG00000004117	-	92	63.259	Monodelphis_domestica
ENSECAG00000018303	YTHDC1	97	53.409	ENSMODG00000010076	-	86	56.427	Monodelphis_domestica
ENSECAG00000018303	YTHDC1	69	58.511	ENSMODG00000009173	-	88	62.319	Monodelphis_domestica
ENSECAG00000018303	YTHDC1	99	86.406	ENSMODG00000020754	-	92	89.053	Monodelphis_domestica
ENSECAG00000018303	YTHDC1	84	76.604	ENSMODG00000014337	-	95	70.960	Monodelphis_domestica
ENSECAG00000018303	YTHDC1	53	67.925	ENSMALG00000013412	ythdc1	79	75.080	Monopterus_albus
ENSECAG00000018303	YTHDC1	99	92.737	MGP_CAROLIEiJ_G0027347	Ythdc1	97	91.439	Mus_caroli
ENSECAG00000018303	YTHDC1	99	92.737	ENSMUSG00000035851	Ythdc1	93	92.899	Mus_musculus
ENSECAG00000018303	YTHDC1	99	92.924	MGP_PahariEiJ_G0017126	Ythdc1	93	93.195	Mus_pahari
ENSECAG00000018303	YTHDC1	99	92.924	MGP_SPRETEiJ_G0028339	Ythdc1	93	93.195	Mus_spretus
ENSECAG00000018303	YTHDC1	76	93.510	ENSMPUG00000001743	YTHDC1	79	93.510	Mustela_putorius_furo
ENSECAG00000018303	YTHDC1	100	97.644	ENSMLUG00000016300	YTHDC1	100	97.778	Myotis_lucifugus
ENSECAG00000018303	YTHDC1	82	88.662	ENSNGAG00000024000	Ythdc1	93	87.783	Nannospalax_galili
ENSECAG00000018303	YTHDC1	61	60.890	ENSNBRG00000007663	ythdc1	67	69.509	Neolamprologus_brichardi
ENSECAG00000018303	YTHDC1	100	95.924	ENSNLEG00000009202	YTHDC1	99	96.022	Nomascus_leucogenys
ENSECAG00000018303	YTHDC1	83	81.875	ENSMEUG00000007128	YTHDC1	81	81.940	Notamacropus_eugenii
ENSECAG00000018303	YTHDC1	74	98.017	ENSOPRG00000008986	YTHDC1	74	98.017	Ochotona_princeps
ENSECAG00000018303	YTHDC1	100	95.753	ENSODEG00000001715	YTHDC1	100	95.753	Octodon_degus
ENSECAG00000018303	YTHDC1	78	66.848	ENSONIG00000012651	ythdc1	92	69.697	Oreochromis_niloticus
ENSECAG00000018303	YTHDC1	92	76.850	ENSOANG00000014398	YTHDC1	84	87.185	Ornithorhynchus_anatinus
ENSECAG00000018303	YTHDC1	98	79.965	ENSOCUG00000015886	YTHDC1	99	93.007	Oryctolagus_cuniculus
ENSECAG00000018303	YTHDC1	57	68.478	ENSORLG00000030544	ythdc1	77	68.434	Oryzias_latipes
ENSECAG00000018303	YTHDC1	60	61.111	ENSORLG00020019316	ythdc1	76	68.434	Oryzias_latipes_hni
ENSECAG00000018303	YTHDC1	62	67.030	ENSOMEG00000000551	ythdc1	86	66.184	Oryzias_melastigma
ENSECAG00000018303	YTHDC1	100	97.127	ENSOGAG00000003362	YTHDC1	100	97.127	Otolemur_garnettii
ENSECAG00000018303	YTHDC1	100	97.808	ENSOARG00000008633	YTHDC1	100	97.808	Ovis_aries
ENSECAG00000018303	YTHDC1	100	97.281	ENSPPAG00000041315	YTHDC1	100	96.482	Pan_paniscus
ENSECAG00000018303	YTHDC1	100	98.790	ENSPPRG00000011979	YTHDC1	100	97.832	Panthera_pardus
ENSECAG00000018303	YTHDC1	100	98.487	ENSPTIG00000015527	YTHDC1	100	97.527	Panthera_tigris_altaica
ENSECAG00000018303	YTHDC1	100	97.281	ENSPTRG00000016105	YTHDC1	100	96.482	Pan_troglodytes
ENSECAG00000018303	YTHDC1	100	97.583	ENSPANG00000021590	YTHDC1	100	96.617	Papio_anubis
ENSECAG00000018303	YTHDC1	79	87.234	ENSPKIG00000018497	ythdc1	93	69.754	Paramormyrops_kingsleyae
ENSECAG00000018303	YTHDC1	98	83.932	ENSPSIG00000002782	YTHDC1	92	86.377	Pelodiscus_sinensis
ENSECAG00000018303	YTHDC1	50	57.100	ENSPMGG00000000970	-	57	79.703	Periophthalmus_magnuspinnatus
ENSECAG00000018303	YTHDC1	100	95.882	ENSPEMG00000013850	Ythdc1	100	95.978	Peromyscus_maniculatus_bairdii
ENSECAG00000018303	YTHDC1	99	85.847	ENSPCIG00000006870	YTHDC1	92	88.609	Phascolarctos_cinereus
ENSECAG00000018303	YTHDC1	61	60.000	ENSPFOG00000013404	ythdc1	76	65.721	Poecilia_formosa
ENSECAG00000018303	YTHDC1	65	58.887	ENSPLAG00000011079	ythdc1	89	65.721	Poecilia_latipinna
ENSECAG00000018303	YTHDC1	56	65.591	ENSPMEG00000009238	ythdc1	76	65.721	Poecilia_mexicana
ENSECAG00000018303	YTHDC1	65	71.429	ENSPREG00000016973	ythdc1	74	57.882	Poecilia_reticulata
ENSECAG00000018303	YTHDC1	93	97.323	ENSPPYG00000014726	YTHDC1	100	97.323	Pongo_abelii
ENSECAG00000018303	YTHDC1	79	100.000	ENSPCAG00000009607	YTHDC1	77	93.064	Procavia_capensis
ENSECAG00000018303	YTHDC1	100	92.447	ENSPCOG00000019105	YTHDC1	100	92.152	Propithecus_coquereli
ENSECAG00000018303	YTHDC1	100	96.306	ENSPVAG00000015551	YTHDC1	100	96.306	Pteropus_vampyrus
ENSECAG00000018303	YTHDC1	78	66.304	ENSPNYG00000011687	ythdc1	92	69.192	Pundamilia_nyererei
ENSECAG00000018303	YTHDC1	99	66.851	ENSPNAG00000028365	ythdc1	91	84.987	Pygocentrus_nattereri
ENSECAG00000018303	YTHDC1	99	91.264	ENSRNOG00000001996	Ythdc1	93	92.117	Rattus_norvegicus
ENSECAG00000018303	YTHDC1	100	96.076	ENSRBIG00000028279	YTHDC1	99	95.479	Rhinopithecus_bieti
ENSECAG00000018303	YTHDC1	100	97.811	ENSRROG00000035028	YTHDC1	100	97.811	Rhinopithecus_roxellana
ENSECAG00000018303	YTHDC1	100	97.734	ENSSBOG00000022353	YTHDC1	100	96.888	Saimiri_boliviensis_boliviensis
ENSECAG00000018303	YTHDC1	99	84.916	ENSSHAG00000002538	YTHDC1	91	88.756	Sarcophilus_harrisii
ENSECAG00000018303	YTHDC1	80	88.202	ENSSFOG00015003298	ythdc1	85	78.495	Scleropages_formosus
ENSECAG00000018303	YTHDC1	61	60.762	ENSSMAG00000009086	ythdc1	84	68.608	Scophthalmus_maximus
ENSECAG00000018303	YTHDC1	56	67.391	ENSSDUG00000022008	ythdc1	82	70.202	Seriola_dumerili
ENSECAG00000018303	YTHDC1	51	72.222	ENSSLDG00000007926	ythdc1	82	70.202	Seriola_lalandi_dorsalis
ENSECAG00000018303	YTHDC1	85	99.307	ENSSARG00000010960	YTHDC1	100	99.307	Sorex_araneus
ENSECAG00000018303	YTHDC1	99	79.035	ENSSPUG00000009357	YTHDC1	80	95.640	Sphenodon_punctatus
ENSECAG00000018303	YTHDC1	61	62.844	ENSSPAG00000011449	ythdc1	82	70.455	Stegastes_partitus
ENSECAG00000018303	YTHDC1	100	97.944	ENSSSCG00000035505	YTHDC1	100	97.027	Sus_scrofa
ENSECAG00000018303	YTHDC1	99	82.900	ENSTGUG00000004452	-	85	85.942	Taeniopygia_guttata
ENSECAG00000018303	YTHDC1	62	67.442	ENSTRUG00000010142	ythdc1	67	72.500	Takifugu_rubripes
ENSECAG00000018303	YTHDC1	92	64.286	ENSTNIG00000013243	ythdc1	89	66.047	Tetraodon_nigroviridis
ENSECAG00000018303	YTHDC1	99	83.240	ENSTBEG00000011546	YTHDC1	92	86.686	Tupaia_belangeri
ENSECAG00000018303	YTHDC1	100	97.808	ENSTTRG00000005083	YTHDC1	100	97.808	Tursiops_truncatus
ENSECAG00000018303	YTHDC1	100	98.822	ENSUAMG00000010388	YTHDC1	100	98.822	Ursus_americanus
ENSECAG00000018303	YTHDC1	100	83.358	ENSUMAG00000013668	YTHDC1	98	84.189	Ursus_maritimus
ENSECAG00000018303	YTHDC1	100	97.277	ENSVPAG00000009040	YTHDC1	100	95.068	Vicugna_pacos
ENSECAG00000018303	YTHDC1	100	99.116	ENSVVUG00000005387	YTHDC1	100	99.116	Vulpes_vulpes
ENSECAG00000018303	YTHDC1	80	90.778	ENSXETG00000017960	ythdc1	91	89.167	Xenopus_tropicalis
ENSECAG00000018303	YTHDC1	67	52.574	ENSXCOG00000000530	ythdc1	77	53.150	Xiphophorus_couchianus
ENSECAG00000018303	YTHDC1	56	64.230	ENSXMAG00000005196	ythdc1	84	65.248	Xiphophorus_maculatus