EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSECAG00000018445 (Gene tree)
Gene ID
-
Gene Symbol
LSM5
Alias
-
Full Name
LSM5 homolog%2C U6 small nuclear RNA and mRNA degradation associated
Gene Type
protein_coding
Species
Equus_caballus
Status
putative
Strand
Minus strand
Length
2860 bases
Position
chr4:62949026-62951885
Accession
19821
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSECAP00000015957LSMPF01423.221.1e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSECAT00000019495-249-ENSECAP0000001595782 (aa)-F7DLC0
Gene Model
Click here to download ENSECAG00000018445's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000018445's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSECAG00000018445LSM510085.714ENSG00000106355LSM510085.714Homo_sapiens
ENSECAG00000018445LSM58979.268ENSAPOG00000011743LSM510075.806Acanthochromis_polyacanthus
ENSECAG00000018445LSM510081.319ENSAPOG00000020779LSM510081.319Acanthochromis_polyacanthus
ENSECAG00000018445LSM510085.714ENSAMEG00000006700LSM510085.714Ailuropoda_melanoleuca
ENSECAG00000018445LSM59552.564ENSACIG00000019185lsm59852.564Amphilophus_citrinellus
ENSECAG00000018445LSM510081.319ENSAOCG00000001636lsm510081.319Amphiprion_ocellaris
ENSECAG00000018445LSM510081.319ENSAPEG00000008151lsm510081.319Amphiprion_percula
ENSECAG00000018445LSM56575.806ENSAPEG00000008201lsm510075.806Amphiprion_percula
ENSECAG00000018445LSM58978.049ENSATEG00000020470lsm510053.659Anabas_testudineus
ENSECAG00000018445LSM57982.432ENSAPLG00000008171LSM510082.432Anas_platyrhynchos
ENSECAG00000018445LSM56590.566ENSACAG00000009530LSM58890.566Anolis_carolinensis
ENSECAG00000018445LSM510067.033ENSANAG00000037758-10067.033Aotus_nancymaae
ENSECAG00000018445LSM510084.615ENSANAG00000034409-10084.615Aotus_nancymaae
ENSECAG00000018445LSM59982.222ENSANAG00000024192-9482.222Aotus_nancymaae
ENSECAG00000018445LSM59580.460ENSACLG00000012891lsm59980.460Astatotilapia_calliptera
ENSECAG00000018445LSM510068.085ENSAMXG00000035543lsm510069.149Astyanax_mexicanus
ENSECAG00000018445LSM55983.333ENSBTAG00000052014-6383.333Bos_taurus
ENSECAG00000018445LSM510090.110ENSBTAG00000002332LSM510090.110Bos_taurus
ENSECAG00000018445LSM510063.736WBGene00003079lsm-510063.736Caenorhabditis_elegans
ENSECAG00000018445LSM59973.333ENSCJAG00000005678-10073.333Callithrix_jacchus
ENSECAG00000018445LSM510085.714ENSCJAG00000047379LSM581100.000Callithrix_jacchus
ENSECAG00000018445LSM56696.296ENSCAFG00000030781-6396.296Canis_familiaris
ENSECAG00000018445LSM510084.615ENSCAFG00000019261-10084.615Canis_familiaris
ENSECAG00000018445LSM510085.714ENSCAFG00020004946LSM510085.714Canis_lupus_dingo
ENSECAG00000018445LSM510085.714ENSCHIG00000024539LSM510085.714Capra_hircus
ENSECAG00000018445LSM57963.514ENSCHIG00000021428-9562.500Capra_hircus
ENSECAG00000018445LSM510084.615ENSCHIG00000004079-10084.615Capra_hircus
ENSECAG00000018445LSM510073.626ENSTSYG00000028728-10073.626Carlito_syrichta
ENSECAG00000018445LSM510068.132ENSTSYG00000026530-9168.132Carlito_syrichta
ENSECAG00000018445LSM510085.714ENSTSYG00000006449-10085.714Carlito_syrichta
ENSECAG00000018445LSM510076.829ENSTSYG00000036637-10076.829Carlito_syrichta
ENSECAG00000018445LSM58074.667ENSCAPG00000006980LSM510074.667Cavia_aperea
ENSECAG00000018445LSM510085.714ENSCPOG00000036386LSM510085.714Cavia_porcellus
ENSECAG00000018445LSM510054.945ENSCCAG00000037334-10054.945Cebus_capucinus
ENSECAG00000018445LSM510069.231ENSCCAG00000032792-10069.231Cebus_capucinus
ENSECAG00000018445LSM510084.615ENSCCAG00000000821-10084.615Cebus_capucinus
ENSECAG00000018445LSM510084.615ENSCCAG00000032123-10084.615Cebus_capucinus
ENSECAG00000018445LSM510085.714ENSCCAG00000037808-10085.714Cebus_capucinus
ENSECAG00000018445LSM59987.805ENSCATG00000014790-10087.805Cercocebus_atys
ENSECAG00000018445LSM510085.714ENSCATG00000040218LSM510085.714Cercocebus_atys
ENSECAG00000018445LSM510073.626ENSCLAG00000005062-9073.626Chinchilla_lanigera
ENSECAG00000018445LSM510085.714ENSCLAG00000000202LSM510085.714Chinchilla_lanigera
ENSECAG00000018445LSM58082.667ENSCHOG00000005335LSM59982.667Choloepus_hoffmanni
ENSECAG00000018445LSM510085.714ENSCPBG00000013685LSM510085.714Chrysemys_picta_bellii
ENSECAG00000018445LSM59877.528ENSCING00000020625-9977.528Ciona_intestinalis
ENSECAG00000018445LSM59476.744ENSCSAVG00000001439-9876.744Ciona_savignyi
ENSECAG00000018445LSM510085.714ENSCANG00000039909LSM510085.714Colobus_angolensis_palliatus
ENSECAG00000018445LSM510085.714ENSCGRG00001015461Lsm510085.714Cricetulus_griseus_chok1gshd
ENSECAG00000018445LSM58082.667ENSCGRG00000007677Lsm510082.667Cricetulus_griseus_crigri
ENSECAG00000018445LSM510053.659ENSCSEG00000015286lsm510053.659Cynoglossus_semilaevis
ENSECAG00000018445LSM510080.220ENSCVAG00000004262lsm510080.220Cyprinodon_variegatus
ENSECAG00000018445LSM510080.220ENSDARG00000071573lsm510080.220Danio_rerio
ENSECAG00000018445LSM59576.744ENSDNOG00000049495-9676.744Dasypus_novemcinctus
ENSECAG00000018445LSM510085.714ENSDNOG00000034958LSM510085.714Dasypus_novemcinctus
ENSECAG00000018445LSM510085.714ENSDORG00000009422Lsm510085.714Dipodomys_ordii
ENSECAG00000018445LSM59472.093FBgn0035675CG66109572.093Drosophila_melanogaster
ENSECAG00000018445LSM510085.366ENSETEG00000010651-10085.366Echinops_telfairi
ENSECAG00000018445LSM59980.247ENSETEG00000001469-9980.247Echinops_telfairi
ENSECAG00000018445LSM510085.714ENSETEG00000018068LSM510085.714Echinops_telfairi
ENSECAG00000018445LSM57987.692ENSETEG00000016074-9887.692Echinops_telfairi
ENSECAG00000018445LSM59855.682ENSETEG00000000777-9955.682Echinops_telfairi
ENSECAG00000018445LSM510079.121ENSEBUG00000008540lsm510079.121Eptatretus_burgeri
ENSECAG00000018445LSM510085.714ENSEASG00005003500LSM510085.714Equus_asinus_asinus
ENSECAG00000018445LSM55973.684ENSEEUG00000004102LSM59573.684Erinaceus_europaeus
ENSECAG00000018445LSM510080.220ENSELUG00000007792lsm510080.220Esox_lucius
ENSECAG00000018445LSM510085.714ENSFCAG00000000230LSM510085.714Felis_catus
ENSECAG00000018445LSM58282.895ENSFALG00000001892LSM59282.895Ficedula_albicollis
ENSECAG00000018445LSM510085.714ENSFDAG00000008767LSM510085.714Fukomys_damarensis
ENSECAG00000018445LSM510070.732ENSFDAG00000008685-10070.732Fukomys_damarensis
ENSECAG00000018445LSM59977.907ENSFHEG00000004011lsm59677.907Fundulus_heteroclitus
ENSECAG00000018445LSM59980.000ENSGMOG00000018235lsm510080.000Gadus_morhua
ENSECAG00000018445LSM510084.615ENSGALG00000041625LSM510084.615Gallus_gallus
ENSECAG00000018445LSM56575.806ENSGAFG00000016824lsm510075.806Gambusia_affinis
ENSECAG00000018445LSM510081.319ENSGACG00000005528lsm510081.319Gasterosteus_aculeatus
ENSECAG00000018445LSM510085.714ENSGAGG00000015593LSM510085.714Gopherus_agassizii
ENSECAG00000018445LSM510085.714ENSGGOG00000043469LSM510085.714Gorilla_gorilla
ENSECAG00000018445LSM59580.460ENSHBUG00000013773lsm59980.460Haplochromis_burtoni
ENSECAG00000018445LSM510085.714ENSHGLG00000011765LSM510085.714Heterocephalus_glaber_female
ENSECAG00000018445LSM510082.418ENSHGLG00100015610LSM510082.418Heterocephalus_glaber_male
ENSECAG00000018445LSM510054.217ENSHCOG00000008288lsm510054.217Hippocampus_comes
ENSECAG00000018445LSM510082.222ENSIPUG00000021095LSM510082.222Ictalurus_punctatus
ENSECAG00000018445LSM510085.714ENSSTOG00000012662LSM510085.714Ictidomys_tridecemlineatus
ENSECAG00000018445LSM59169.767ENSSTOG00000033886-9769.767Ictidomys_tridecemlineatus
ENSECAG00000018445LSM510059.551ENSJJAG00000016144-9259.551Jaculus_jaculus
ENSECAG00000018445LSM58574.684ENSJJAG00000004475-10074.684Jaculus_jaculus
ENSECAG00000018445LSM510083.516ENSJJAG00000012145-10083.516Jaculus_jaculus
ENSECAG00000018445LSM510081.720ENSKMAG00000021861lsm510081.720Kryptolebias_marmoratus
ENSECAG00000018445LSM58978.049ENSLBEG00000009235LSM56578.049Labrus_bergylta
ENSECAG00000018445LSM56390.385ENSLBEG00000017379lsm58590.385Labrus_bergylta
ENSECAG00000018445LSM510081.319ENSLACG00000022448LSM510081.319Latimeria_chalumnae
ENSECAG00000018445LSM510080.220ENSLOCG00000012903lsm510080.220Lepisosteus_oculatus
ENSECAG00000018445LSM510058.242ENSLAFG00000027938-10058.242Loxodonta_africana
ENSECAG00000018445LSM510085.714ENSLAFG00000029579LSM510085.714Loxodonta_africana
ENSECAG00000018445LSM510083.516ENSMFAG00000030152-10083.516Macaca_fascicularis
ENSECAG00000018445LSM55993.750ENSMFAG00000031187-8193.750Macaca_fascicularis
ENSECAG00000018445LSM510085.714ENSMFAG00000038508LSM510085.714Macaca_fascicularis
ENSECAG00000018445LSM59989.024ENSMMUG00000039822-10089.024Macaca_mulatta
ENSECAG00000018445LSM563100.000ENSMMUG00000045129-81100.000Macaca_mulatta
ENSECAG00000018445LSM510083.516ENSMMUG00000030131-10083.516Macaca_mulatta
ENSECAG00000018445LSM510083.516ENSMNEG00000037935-10083.516Macaca_nemestrina
ENSECAG00000018445LSM510085.714ENSMNEG00000015331LSM510085.714Macaca_nemestrina
ENSECAG00000018445LSM59887.654ENSMLEG00000034037-10087.654Mandrillus_leucophaeus
ENSECAG00000018445LSM510085.714ENSMLEG00000024945LSM510085.714Mandrillus_leucophaeus
ENSECAG00000018445LSM510079.121ENSMAMG00000012869lsm510079.121Mastacembelus_armatus
ENSECAG00000018445LSM59580.460ENSMZEG00005019554lsm59980.460Maylandia_zebra
ENSECAG00000018445LSM510084.615ENSMGAG00000012117LSM510084.615Meleagris_gallopavo
ENSECAG00000018445LSM510085.714ENSMAUG00000012222Lsm510085.714Mesocricetus_auratus
ENSECAG00000018445LSM510084.615ENSMAUG00000008132-10084.615Mesocricetus_auratus
ENSECAG00000018445LSM510085.714ENSMICG00000005353LSM510085.714Microcebus_murinus
ENSECAG00000018445LSM59963.333ENSMICG00000033928-9663.333Microcebus_murinus
ENSECAG00000018445LSM510085.714ENSMOCG00000012018Lsm510085.714Microtus_ochrogaster
ENSECAG00000018445LSM58280.263ENSMMOG00000004026lsm58780.263Mola_mola
ENSECAG00000018445LSM56579.032ENSMODG00000013274-10079.032Monodelphis_domestica
ENSECAG00000018445LSM56572.581ENSMALG00000010343lsm510072.581Monopterus_albus
ENSECAG00000018445LSM510085.714MGP_CAROLIEiJ_G0028421Lsm5100100.000Mus_caroli
ENSECAG00000018445LSM510085.714ENSMUSG00000091625Lsm5100100.000Mus_musculus
ENSECAG00000018445LSM510085.714MGP_PahariEiJ_G0022171Lsm5100100.000Mus_pahari
ENSECAG00000018445LSM510085.714MGP_SPRETEiJ_G0029423Lsm5100100.000Mus_spretus
ENSECAG00000018445LSM510085.714ENSMLUG00000017028LSM510085.714Myotis_lucifugus
ENSECAG00000018445LSM59971.951ENSNGAG00000022569-9671.951Nannospalax_galili
ENSECAG00000018445LSM510074.194ENSNGAG00000017707-10074.194Nannospalax_galili
ENSECAG00000018445LSM510085.714ENSNGAG00000024142Lsm510085.714Nannospalax_galili
ENSECAG00000018445LSM55973.684ENSNBRG00000011386lsm57673.684Neolamprologus_brichardi
ENSECAG00000018445LSM55691.304ENSNBRG00000009964LSM59891.304Neolamprologus_brichardi
ENSECAG00000018445LSM510085.714ENSNLEG00000015268LSM510085.714Nomascus_leucogenys
ENSECAG00000018445LSM58082.667ENSOPRG00000002443LSM510082.667Ochotona_princeps
ENSECAG00000018445LSM510085.714ENSODEG00000019072-10085.714Octodon_degus
ENSECAG00000018445LSM510085.714ENSODEG00000008258-10085.714Octodon_degus
ENSECAG00000018445LSM58053.333ENSOANG00000014540-10053.333Ornithorhynchus_anatinus
ENSECAG00000018445LSM510085.714ENSOCUG00000029043LSM510085.714Oryctolagus_cuniculus
ENSECAG00000018445LSM510079.121ENSORLG00000027725lsm55879.121Oryzias_latipes
ENSECAG00000018445LSM59575.862ENSORLG00020003019lsm58675.862Oryzias_latipes_hni
ENSECAG00000018445LSM510079.121ENSORLG00015003338lsm510079.121Oryzias_latipes_hsok
ENSECAG00000018445LSM510078.022ENSOMEG00000001078lsm510078.022Oryzias_melastigma
ENSECAG00000018445LSM510085.714ENSOGAG00000013892LSM510085.714Otolemur_garnettii
ENSECAG00000018445LSM510085.714ENSOARG00000006944LSM510085.714Ovis_aries
ENSECAG00000018445LSM510085.714ENSPPAG00000003697-10085.714Pan_paniscus
ENSECAG00000018445LSM510085.714ENSPPRG00000002550LSM510085.714Panthera_pardus
ENSECAG00000018445LSM510085.714ENSPTIG00000015604LSM510085.714Panthera_tigris_altaica
ENSECAG00000018445LSM510094.253ENSPTRG00000019057LSM510094.253Pan_troglodytes
ENSECAG00000018445LSM510094.253ENSPTRG00000049488-10094.253Pan_troglodytes
ENSECAG00000018445LSM510085.714ENSPANG00000032179-10085.714Papio_anubis
ENSECAG00000018445LSM59989.024ENSPANG00000032538-10089.024Papio_anubis
ENSECAG00000018445LSM510082.418ENSPANG00000033477-10082.418Papio_anubis
ENSECAG00000018445LSM510080.220ENSPKIG00000011910lsm510080.220Paramormyrops_kingsleyae
ENSECAG00000018445LSM57982.432ENSPSIG00000014796LSM510082.432Pelodiscus_sinensis
ENSECAG00000018445LSM56575.806ENSPMGG00000011699lsm510075.806Periophthalmus_magnuspinnatus
ENSECAG00000018445LSM510074.390ENSPEMG00000022375-10074.390Peromyscus_maniculatus_bairdii
ENSECAG00000018445LSM557100.000ENSPEMG00000019994-80100.000Peromyscus_maniculatus_bairdii
ENSECAG00000018445LSM510080.220ENSPFOG00000001433lsm510080.220Poecilia_formosa
ENSECAG00000018445LSM510082.418ENSPLAG00000009665lsm510082.418Poecilia_latipinna
ENSECAG00000018445LSM510080.220ENSPMEG00000022265lsm510080.220Poecilia_mexicana
ENSECAG00000018445LSM56575.806ENSPREG00000022452lsm510075.806Poecilia_reticulata
ENSECAG00000018445LSM510089.011ENSPPYG00000017661LSM510089.011Pongo_abelii
ENSECAG00000018445LSM58883.951ENSPCAG00000013740LSM510083.951Procavia_capensis
ENSECAG00000018445LSM510085.714ENSPVAG00000009786LSM510085.714Pteropus_vampyrus
ENSECAG00000018445LSM59580.460ENSPNYG00000022236lsm59980.460Pundamilia_nyererei
ENSECAG00000018445LSM510079.121ENSPNAG00000001887lsm510079.121Pygocentrus_nattereri
ENSECAG00000018445LSM510085.714ENSRNOG00000042126Lsm510085.714Rattus_norvegicus
ENSECAG00000018445LSM510081.522ENSRNOG00000027305AABR07065089.110081.522Rattus_norvegicus
ENSECAG00000018445LSM510085.714ENSRBIG00000030714-10085.714Rhinopithecus_bieti
ENSECAG00000018445LSM510085.714ENSRBIG00000027803-10085.714Rhinopithecus_bieti
ENSECAG00000018445LSM510085.714ENSRBIG00000030340-10085.714Rhinopithecus_bieti
ENSECAG00000018445LSM510084.615ENSRBIG00000024431-10084.615Rhinopithecus_bieti
ENSECAG00000018445LSM510085.714ENSRROG00000023884-10085.714Rhinopithecus_roxellana
ENSECAG00000018445LSM510085.714ENSRROG00000042782-10085.714Rhinopithecus_roxellana
ENSECAG00000018445LSM510085.714ENSRROG00000004655-10085.714Rhinopithecus_roxellana
ENSECAG00000018445LSM58342.683YER146W-8842.683Saccharomyces_cerevisiae
ENSECAG00000018445LSM510085.714ENSSBOG00000012312LSM510085.714Saimiri_boliviensis_boliviensis
ENSECAG00000018445LSM510065.934ENSSBOG00000034794-10065.934Saimiri_boliviensis_boliviensis
ENSECAG00000018445LSM510083.516ENSSBOG00000019124-10083.516Saimiri_boliviensis_boliviensis
ENSECAG00000018445LSM510080.220ENSSFOG00015010099lsm510080.220Scleropages_formosus
ENSECAG00000018445LSM510054.878ENSSMAG00000007895lsm510054.878Scophthalmus_maximus
ENSECAG00000018445LSM56575.806ENSSDUG00000010762lsm510075.806Seriola_dumerili
ENSECAG00000018445LSM510080.220ENSSLDG00000025242lsm510080.220Seriola_lalandi_dorsalis
ENSECAG00000018445LSM58364.935ENSSLDG00000008014-9264.935Seriola_lalandi_dorsalis
ENSECAG00000018445LSM510062.637ENSSARG00000003330LSM510062.637Sorex_araneus
ENSECAG00000018445LSM510083.516ENSSPUG00000002690LSM510083.516Sphenodon_punctatus
ENSECAG00000018445LSM510054.878ENSSPAG00000005435lsm510054.878Stegastes_partitus
ENSECAG00000018445LSM57372.464ENSSSCG00000029661-9672.464Sus_scrofa
ENSECAG00000018445LSM510085.714ENSSSCG00000026064-10085.714Sus_scrofa
ENSECAG00000018445LSM510082.418ENSTGUG00000017539LSM510082.418Taeniopygia_guttata
ENSECAG00000018445LSM58474.699ENSTRUG00000017749lsm56474.699Takifugu_rubripes
ENSECAG00000018445LSM59581.609ENSTNIG00000008695lsm59981.609Tetraodon_nigroviridis
ENSECAG00000018445LSM510085.714ENSTBEG00000004876LSM510085.714Tupaia_belangeri
ENSECAG00000018445LSM510085.714ENSTTRG00000004237LSM510085.714Tursiops_truncatus
ENSECAG00000018445LSM56698.148ENSUAMG00000009786LSM57098.148Ursus_americanus
ENSECAG00000018445LSM510084.615ENSUMAG00000002625LSM56584.615Ursus_maritimus
ENSECAG00000018445LSM510085.714ENSVPAG00000009985LSM510085.714Vicugna_pacos
ENSECAG00000018445LSM510085.714ENSVVUG00000021311LSM510085.714Vulpes_vulpes
ENSECAG00000018445LSM58979.268ENSXETG00000026465lsm510079.268Xenopus_tropicalis
ENSECAG00000018445LSM56575.806ENSXCOG00000015348lsm510075.806Xiphophorus_couchianus
ENSECAG00000018445LSM510082.418ENSXMAG00000029988lsm510082.418Xiphophorus_maculatus

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