EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000018495 (Gene tree)
Gene ID: 100052752
Gene Symbol: SSB
Alias: -
Full Name: Equus caballus Sjogren syndrome antigen B (SSB)%2C mRNA.
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 9993 bases
Position: chr18:49356712-49366704
Accession: NM_001309185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000016261	RRM_1	PF00076.22	5.1e-15	1	1
ENSECAP00000044988	RRM_1	PF00076.22	5.5e-15	1	1
ENSECAP00000016261	RRM_3	PF08777.11	2.4e-31	1	1
ENSECAP00000044988	RRM_3	PF08777.11	2.5e-31	1	1
ENSECAP00000016261	La	PF05383.17	8.4e-22	1	1
ENSECAP00000044988	La	PF05383.17	8.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000058037	-	1624	-	ENSECAP00000044988	405 (aa)	-	UPI000155FC00
ENSECAT00000019835	-	1179	-	ENSECAP00000016261	392 (aa)	-	F7BPV6

Gene Model

Click here to download ENSECAG00000018495's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000018495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000018495	SSB	100	95.833	ENSG00000138385	SSB	100	99.167	Homo_sapiens
ENSECAG00000018495	SSB	98	55.473	ENSAPOG00000003448	ssb	100	55.911	Acanthochromis_polyacanthus
ENSECAG00000018495	SSB	100	93.333	ENSAMEG00000010507	SSB	100	93.333	Ailuropoda_melanoleuca
ENSECAG00000018495	SSB	92	59.091	ENSACIG00000001738	ssb	97	58.933	Amphilophus_citrinellus
ENSECAG00000018495	SSB	98	55.721	ENSAOCG00000020398	ssb	100	56.404	Amphiprion_ocellaris
ENSECAG00000018495	SSB	98	55.970	ENSAPEG00000020395	ssb	100	56.650	Amphiprion_percula
ENSECAG00000018495	SSB	99	57.635	ENSATEG00000016884	ssb	100	58.128	Anabas_testudineus
ENSECAG00000018495	SSB	100	70.991	ENSAPLG00000006109	SSB	100	72.471	Anas_platyrhynchos
ENSECAG00000018495	SSB	100	67.805	ENSACAG00000017008	SSB	99	67.805	Anolis_carolinensis
ENSECAG00000018495	SSB	100	86.667	ENSANAG00000027195	-	100	86.667	Aotus_nancymaae
ENSECAG00000018495	SSB	99	55.693	ENSACLG00000010798	ssb	100	55.446	Astatotilapia_calliptera
ENSECAG00000018495	SSB	98	55.637	ENSAMXG00000012606	ssb	100	56.971	Astyanax_mexicanus
ENSECAG00000018495	SSB	100	97.037	ENSBTAG00000008716	SSB	100	97.037	Bos_taurus
ENSECAG00000018495	SSB	76	35.430	WBGene00016653	C44E4.4	93	32.440	Caenorhabditis_elegans
ENSECAG00000018495	SSB	100	95.556	ENSCJAG00000045073	SSB	100	95.556	Callithrix_jacchus
ENSECAG00000018495	SSB	100	96.552	ENSCAFG00000012418	SSB	100	96.552	Canis_familiaris
ENSECAG00000018495	SSB	100	96.552	ENSCAFG00020002900	SSB	100	96.552	Canis_lupus_dingo
ENSECAG00000018495	SSB	100	90.633	ENSCHIG00000022196	-	100	90.633	Capra_hircus
ENSECAG00000018495	SSB	100	96.543	ENSCHIG00000022624	-	100	96.543	Capra_hircus
ENSECAG00000018495	SSB	100	95.802	ENSTSYG00000000097	SSB	100	95.802	Carlito_syrichta
ENSECAG00000018495	SSB	100	96.790	ENSCPOG00000003338	SSB	100	96.790	Cavia_porcellus
ENSECAG00000018495	SSB	100	96.049	ENSCCAG00000035147	SSB	100	96.049	Cebus_capucinus
ENSECAG00000018495	SSB	100	75.309	ENSCATG00000036701	SSB	100	75.309	Cercocebus_atys
ENSECAG00000018495	SSB	100	71.605	ENSCATG00000042909	-	100	71.605	Cercocebus_atys
ENSECAG00000018495	SSB	100	96.296	ENSCLAG00000015617	-	100	96.296	Chinchilla_lanigera
ENSECAG00000018495	SSB	100	96.049	ENSCSAG00000015200	SSB	89	96.049	Chlorocebus_sabaeus
ENSECAG00000018495	SSB	98	87.154	ENSCSAG00000018390	-	100	87.154	Chlorocebus_sabaeus
ENSECAG00000018495	SSB	100	95.802	ENSCHOG00000007763	SSB	100	95.802	Choloepus_hoffmanni
ENSECAG00000018495	SSB	100	79.462	ENSCPBG00000006519	SSB	100	80.196	Chrysemys_picta_bellii
ENSECAG00000018495	SSB	98	75.439	ENSCANG00000028838	-	95	75.439	Colobus_angolensis_palliatus
ENSECAG00000018495	SSB	100	96.296	ENSCANG00000027695	SSB	100	96.296	Colobus_angolensis_palliatus
ENSECAG00000018495	SSB	100	81.235	ENSCANG00000033240	-	100	81.235	Colobus_angolensis_palliatus
ENSECAG00000018495	SSB	100	80.000	ENSCGRG00001024831	Ssb	100	81.220	Cricetulus_griseus_chok1gshd
ENSECAG00000018495	SSB	100	80.000	ENSCGRG00000005387	Ssb	100	81.220	Cricetulus_griseus_crigri
ENSECAG00000018495	SSB	98	57.250	ENSCSEG00000011599	ssb	99	58.000	Cynoglossus_semilaevis
ENSECAG00000018495	SSB	99	57.740	ENSCVAG00000021558	ssb	100	58.231	Cyprinodon_variegatus
ENSECAG00000018495	SSB	98	57.816	ENSDARG00000029252	ssb	99	57.816	Danio_rerio
ENSECAG00000018495	SSB	100	95.062	ENSDNOG00000013450	SSB	100	95.062	Dasypus_novemcinctus
ENSECAG00000018495	SSB	100	85.401	ENSDORG00000005543	Ssb	100	85.401	Dipodomys_ordii
ENSECAG00000018495	SSB	86	34.384	FBgn0011638	La	92	34.737	Drosophila_melanogaster
ENSECAG00000018495	SSB	58	94.527	ENSETEG00000004614	-	61	94.527	Echinops_telfairi
ENSECAG00000018495	SSB	96	47.959	ENSEBUG00000001237	ssb	96	48.214	Eptatretus_burgeri
ENSECAG00000018495	SSB	100	99.753	ENSEASG00005022835	SSB	100	99.753	Equus_asinus_asinus
ENSECAG00000018495	SSB	82	89.286	ENSEEUG00000008077	SSB	86	89.286	Erinaceus_europaeus
ENSECAG00000018495	SSB	98	60.050	ENSELUG00000020929	ssb	100	60.539	Esox_lucius
ENSECAG00000018495	SSB	100	96.798	ENSFCAG00000011601	SSB	100	96.798	Felis_catus
ENSECAG00000018495	SSB	100	75.676	ENSFALG00000000930	SSB	100	75.676	Ficedula_albicollis
ENSECAG00000018495	SSB	100	96.049	ENSFDAG00000000598	SSB	100	96.049	Fukomys_damarensis
ENSECAG00000018495	SSB	72	55.184	ENSFHEG00000003268	ssb	95	55.556	Fundulus_heteroclitus
ENSECAG00000018495	SSB	97	55.087	ENSGMOG00000002664	ssb	99	55.831	Gadus_morhua
ENSECAG00000018495	SSB	100	75.490	ENSGALG00000009677	SSB	100	75.490	Gallus_gallus
ENSECAG00000018495	SSB	99	56.404	ENSGAFG00000002749	ssb	100	56.650	Gambusia_affinis
ENSECAG00000018495	SSB	99	55.097	ENSGACG00000005107	ssb	100	55.448	Gasterosteus_aculeatus
ENSECAG00000018495	SSB	100	79.218	ENSGAGG00000007807	SSB	100	79.462	Gopherus_agassizii
ENSECAG00000018495	SSB	63	92.444	ENSGGOG00000023471	-	100	92.444	Gorilla_gorilla
ENSECAG00000018495	SSB	100	79.012	ENSGGOG00000024891	-	100	79.012	Gorilla_gorilla
ENSECAG00000018495	SSB	99	55.198	ENSHBUG00000006584	ssb	100	54.950	Haplochromis_burtoni
ENSECAG00000018495	SSB	100	87.961	ENSHGLG00000004478	-	100	87.961	Heterocephalus_glaber_female
ENSECAG00000018495	SSB	100	94.903	ENSHGLG00000017580	-	100	94.903	Heterocephalus_glaber_female
ENSECAG00000018495	SSB	100	86.914	ENSHGLG00000005832	-	100	86.914	Heterocephalus_glaber_female
ENSECAG00000018495	SSB	100	94.903	ENSHGLG00100003084	-	100	94.903	Heterocephalus_glaber_male
ENSECAG00000018495	SSB	100	82.963	ENSHGLG00100008767	-	100	82.963	Heterocephalus_glaber_male
ENSECAG00000018495	SSB	98	55.416	ENSHCOG00000019011	ssb	99	55.668	Hippocampus_comes
ENSECAG00000018495	SSB	97	58.458	ENSIPUG00000003681	SSB	99	58.911	Ictalurus_punctatus
ENSECAG00000018495	SSB	100	96.296	ENSSTOG00000008416	SSB	100	96.296	Ictidomys_tridecemlineatus
ENSECAG00000018495	SSB	99	69.154	ENSJJAG00000016250	-	99	69.154	Jaculus_jaculus
ENSECAG00000018495	SSB	100	80.615	ENSJJAG00000023158	-	100	80.615	Jaculus_jaculus
ENSECAG00000018495	SSB	99	56.404	ENSKMAG00000017317	ssb	100	56.897	Kryptolebias_marmoratus
ENSECAG00000018495	SSB	98	54.229	ENSLBEG00000017345	ssb	100	55.172	Labrus_bergylta
ENSECAG00000018495	SSB	99	67.076	ENSLACG00000014056	SSB	99	69.363	Latimeria_chalumnae
ENSECAG00000018495	SSB	98	67.332	ENSLOCG00000007933	ssb	99	67.830	Lepisosteus_oculatus
ENSECAG00000018495	SSB	100	86.730	ENSLAFG00000000867	-	100	89.573	Loxodonta_africana
ENSECAG00000018495	SSB	100	79.753	ENSLAFG00000028909	-	100	79.753	Loxodonta_africana
ENSECAG00000018495	SSB	77	70.530	ENSLAFG00000026721	-	99	70.530	Loxodonta_africana
ENSECAG00000018495	SSB	100	96.296	ENSMFAG00000039066	SSB	100	96.296	Macaca_fascicularis
ENSECAG00000018495	SSB	91	81.461	ENSMFAG00000041478	-	100	81.793	Macaca_fascicularis
ENSECAG00000018495	SSB	99	67.494	ENSMMUG00000039889	-	100	67.742	Macaca_mulatta
ENSECAG00000018495	SSB	100	80.988	ENSMMUG00000011724	-	97	80.988	Macaca_mulatta
ENSECAG00000018495	SSB	100	96.296	ENSMMUG00000023051	SSB	100	96.296	Macaca_mulatta
ENSECAG00000018495	SSB	91	81.461	ENSMNEG00000034698	-	100	81.793	Macaca_nemestrina
ENSECAG00000018495	SSB	100	83.659	ENSMNEG00000028321	SSB	85	100.000	Macaca_nemestrina
ENSECAG00000018495	SSB	100	96.296	ENSMLEG00000035717	SSB	100	96.296	Mandrillus_leucophaeus
ENSECAG00000018495	SSB	100	68.395	ENSMLEG00000042644	-	100	68.395	Mandrillus_leucophaeus
ENSECAG00000018495	SSB	99	58.867	ENSMAMG00000004800	ssb	100	59.360	Mastacembelus_armatus
ENSECAG00000018495	SSB	99	55.693	ENSMZEG00005005749	ssb	100	55.446	Maylandia_zebra
ENSECAG00000018495	SSB	100	75.490	ENSMGAG00000010328	SSB	99	77.073	Meleagris_gallopavo
ENSECAG00000018495	SSB	99	96.526	ENSMICG00000028252	-	99	96.526	Microcebus_murinus
ENSECAG00000018495	SSB	98	89.844	ENSMICG00000033304	-	98	87.887	Microcebus_murinus
ENSECAG00000018495	SSB	100	79.277	ENSMODG00000008227	-	100	80.000	Monodelphis_domestica
ENSECAG00000018495	SSB	100	67.407	ENSMODG00000019271	-	100	67.407	Monodelphis_domestica
ENSECAG00000018495	SSB	85	81.132	ENSMODG00000007027	-	99	81.132	Monodelphis_domestica
ENSECAG00000018495	SSB	90	58.583	ENSMALG00000008045	ssb	90	59.151	Monopterus_albus
ENSECAG00000018495	SSB	100	78.622	MGP_CAROLIEiJ_G0023629	-	100	92.935	Mus_caroli
ENSECAG00000018495	SSB	100	77.910	ENSMUSG00000068882	Ssb	100	92.935	Mus_musculus
ENSECAG00000018495	SSB	100	77.910	MGP_PahariEiJ_G0025081	-	100	92.935	Mus_pahari
ENSECAG00000018495	SSB	100	77.910	MGP_SPRETEiJ_G0024551	Ssb	100	92.935	Mus_spretus
ENSECAG00000018495	SSB	100	97.531	ENSMPUG00000000785	SSB	100	97.531	Mustela_putorius_furo
ENSECAG00000018495	SSB	100	91.905	ENSMLUG00000016316	SSB	100	91.905	Myotis_lucifugus
ENSECAG00000018495	SSB	99	55.693	ENSNBRG00000012661	ssb	100	55.446	Neolamprologus_brichardi
ENSECAG00000018495	SSB	100	96.543	ENSNLEG00000004958	SSB	100	96.543	Nomascus_leucogenys
ENSECAG00000018495	SSB	100	68.966	ENSNLEG00000028754	-	100	69.458	Nomascus_leucogenys
ENSECAG00000018495	SSB	63	88.710	ENSMEUG00000001650	-	100	88.710	Notamacropus_eugenii
ENSECAG00000018495	SSB	72	75.517	ENSOPRG00000008475	-	100	75.517	Ochotona_princeps
ENSECAG00000018495	SSB	93	91.233	ENSODEG00000004202	-	100	91.233	Octodon_degus
ENSECAG00000018495	SSB	99	55.198	ENSONIG00000008776	ssb	100	54.950	Oreochromis_niloticus
ENSECAG00000018495	SSB	100	84.691	ENSOANG00000008543	SSB	100	84.691	Ornithorhynchus_anatinus
ENSECAG00000018495	SSB	100	95.802	ENSOCUG00000010396	SSB	100	95.802	Oryctolagus_cuniculus
ENSECAG00000018495	SSB	99	58.128	ENSORLG00000017208	ssb	100	58.374	Oryzias_latipes
ENSECAG00000018495	SSB	99	58.374	ENSORLG00020022574	ssb	100	58.621	Oryzias_latipes_hni
ENSECAG00000018495	SSB	99	57.882	ENSORLG00015016592	ssb	100	58.128	Oryzias_latipes_hsok
ENSECAG00000018495	SSB	98	58.105	ENSOMEG00000003193	ssb	100	59.012	Oryzias_melastigma
ENSECAG00000018495	SSB	100	89.810	ENSOGAG00000029768	SSB	100	89.810	Otolemur_garnettii
ENSECAG00000018495	SSB	100	96.049	ENSOARG00000002906	SSB	100	96.049	Ovis_aries
ENSECAG00000018495	SSB	100	78.272	ENSPPAG00000032427	-	100	87.597	Pan_paniscus
ENSECAG00000018495	SSB	97	74.619	ENSPPAG00000006189	-	96	78.495	Pan_paniscus
ENSECAG00000018495	SSB	100	95.833	ENSPPAG00000042673	SSB	100	95.833	Pan_paniscus
ENSECAG00000018495	SSB	100	96.798	ENSPPRG00000006599	SSB	100	96.798	Panthera_pardus
ENSECAG00000018495	SSB	100	96.552	ENSPTIG00000011021	SSB	97	96.552	Panthera_tigris_altaica
ENSECAG00000018495	SSB	100	74.568	ENSPTRG00000042880	-	100	74.568	Pan_troglodytes
ENSECAG00000018495	SSB	100	95.833	ENSPTRG00000012620	SSB	100	95.833	Pan_troglodytes
ENSECAG00000018495	SSB	98	66.667	ENSPANG00000031877	-	95	66.667	Papio_anubis
ENSECAG00000018495	SSB	100	68.642	ENSPANG00000034126	-	100	69.136	Papio_anubis
ENSECAG00000018495	SSB	100	96.296	ENSPANG00000007440	SSB	100	96.296	Papio_anubis
ENSECAG00000018495	SSB	98	62.843	ENSPKIG00000019325	ssb	99	63.704	Paramormyrops_kingsleyae
ENSECAG00000018495	SSB	100	77.262	ENSPSIG00000002265	SSB	93	77.262	Pelodiscus_sinensis
ENSECAG00000018495	SSB	84	55.301	ENSPMGG00000020075	ssb	92	55.587	Periophthalmus_magnuspinnatus
ENSECAG00000018495	SSB	84	49.697	ENSPMAG00000002982	ssb	100	45.581	Petromyzon_marinus
ENSECAG00000018495	SSB	100	83.498	ENSPCIG00000028591	-	100	83.744	Phascolarctos_cinereus
ENSECAG00000018495	SSB	99	57.389	ENSPFOG00000009650	ssb	100	57.635	Poecilia_formosa
ENSECAG00000018495	SSB	99	57.143	ENSPLAG00000020498	ssb	100	57.389	Poecilia_latipinna
ENSECAG00000018495	SSB	99	56.897	ENSPMEG00000001051	ssb	100	57.389	Poecilia_mexicana
ENSECAG00000018495	SSB	92	57.937	ENSPREG00000003708	ssb	98	58.201	Poecilia_reticulata
ENSECAG00000018495	SSB	100	96.543	ENSPPYG00000012919	SSB	100	96.543	Pongo_abelii
ENSECAG00000018495	SSB	95	89.817	ENSPCAG00000010276	SSB	100	89.817	Procavia_capensis
ENSECAG00000018495	SSB	100	84.444	ENSPCOG00000023189	-	100	84.444	Propithecus_coquereli
ENSECAG00000018495	SSB	100	92.840	ENSPCOG00000015741	-	100	92.840	Propithecus_coquereli
ENSECAG00000018495	SSB	87	97.740	ENSPVAG00000006615	SSB	100	97.740	Pteropus_vampyrus
ENSECAG00000018495	SSB	99	55.693	ENSPNYG00000006444	ssb	100	55.446	Pundamilia_nyererei
ENSECAG00000018495	SSB	98	57.143	ENSPNAG00000011708	ssb	100	57.767	Pygocentrus_nattereri
ENSECAG00000018495	SSB	100	78.622	ENSRNOG00000007998	Ssb	100	78.622	Rattus_norvegicus
ENSECAG00000018495	SSB	100	79.167	ENSRNOG00000011606	AABR07061825.1	100	79.167	Rattus_norvegicus
ENSECAG00000018495	SSB	100	79.512	ENSRBIG00000041972	SSB	88	100.000	Rhinopithecus_bieti
ENSECAG00000018495	SSB	89	88.122	ENSRBIG00000041608	-	98	88.122	Rhinopithecus_bieti
ENSECAG00000018495	SSB	94	79.683	ENSRBIG00000041232	-	98	79.683	Rhinopithecus_bieti
ENSECAG00000018495	SSB	100	69.951	ENSRBIG00000029918	-	100	69.951	Rhinopithecus_bieti
ENSECAG00000018495	SSB	100	96.296	ENSRROG00000040346	SSB	100	96.296	Rhinopithecus_roxellana
ENSECAG00000018495	SSB	98	86.500	ENSRROG00000034102	-	98	86.432	Rhinopithecus_roxellana
ENSECAG00000018495	SSB	100	79.803	ENSRROG00000007149	-	100	79.803	Rhinopithecus_roxellana
ENSECAG00000018495	SSB	98	80.808	ENSRROG00000031684	-	100	80.808	Rhinopithecus_roxellana
ENSECAG00000018495	SSB	100	96.543	ENSSBOG00000027204	SSB	100	96.543	Saimiri_boliviensis_boliviensis
ENSECAG00000018495	SSB	100	83.498	ENSSHAG00000018062	SSB	100	83.744	Sarcophilus_harrisii
ENSECAG00000018495	SSB	99	64.548	ENSSFOG00015000550	ssb	100	65.037	Scleropages_formosus
ENSECAG00000018495	SSB	98	53.885	ENSSMAG00000013885	ssb	99	57.754	Scophthalmus_maximus
ENSECAG00000018495	SSB	99	57.882	ENSSDUG00000020117	ssb	100	57.882	Seriola_dumerili
ENSECAG00000018495	SSB	99	55.583	ENSSLDG00000002525	ssb	100	55.583	Seriola_lalandi_dorsalis
ENSECAG00000018495	SSB	95	87.467	ENSSARG00000007747	SSB	100	87.467	Sorex_araneus
ENSECAG00000018495	SSB	100	77.396	ENSSPUG00000012112	SSB	100	77.396	Sphenodon_punctatus
ENSECAG00000018495	SSB	98	55.970	ENSSPAG00000005696	ssb	100	56.650	Stegastes_partitus
ENSECAG00000018495	SSB	98	78.338	ENSSSCG00000015938	SSB	98	78.894	Sus_scrofa
ENSECAG00000018495	SSB	100	75.550	ENSTGUG00000007942	SSB	100	75.550	Taeniopygia_guttata
ENSECAG00000018495	SSB	99	57.426	ENSTRUG00000017839	ssb	100	58.025	Takifugu_rubripes
ENSECAG00000018495	SSB	90	59.783	ENSTNIG00000000915	ssb	100	59.783	Tetraodon_nigroviridis
ENSECAG00000018495	SSB	83	100.000	ENSTBEG00000009056	SSB	82	100.000	Tupaia_belangeri
ENSECAG00000018495	SSB	100	97.291	ENSTTRG00000002152	SSB	100	97.291	Tursiops_truncatus
ENSECAG00000018495	SSB	93	97.872	ENSUAMG00000027833	SSB	99	97.872	Ursus_americanus
ENSECAG00000018495	SSB	100	96.798	ENSUMAG00000013907	SSB	100	96.798	Ursus_maritimus
ENSECAG00000018495	SSB	100	96.543	ENSVPAG00000007183	SSB	100	96.543	Vicugna_pacos
ENSECAG00000018495	SSB	100	96.552	ENSVVUG00000016573	SSB	78	96.552	Vulpes_vulpes
ENSECAG00000018495	SSB	100	59.112	ENSXETG00000025402	ssb	100	61.072	Xenopus_tropicalis
ENSECAG00000018495	SSB	92	55.703	ENSXCOG00000019109	ssb	93	61.719	Xiphophorus_couchianus
ENSECAG00000018495	SSB	99	56.404	ENSXMAG00000004888	ssb	100	56.650	Xiphophorus_maculatus