EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000018659 (Gene tree)
Gene ID: 100064953
Gene Symbol: SAFB
Alias: -
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 103837 bases
Position: chr7:3896538-4000374
Accession: 22667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000037255	RRM_5	PF13893.6	1.1e-06	1	1
ENSECAP00000016508	RRM_5	PF13893.6	1.2e-06	1	1
ENSECAP00000037255	RRM_1	PF00076.22	6.6e-13	1	1
ENSECAP00000016508	RRM_1	PF00076.22	7.1e-13	1	1
ENSECAP00000037255	SAP	PF02037.27	2e-10	1	1
ENSECAP00000016508	SAP	PF02037.27	2.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000061459	-	2895	-	ENSECAP00000037255	964 (aa)	-	-
ENSECAT00000020130	-	3084	XM_023644509	ENSECAP00000016508	1027 (aa)	XP_023500277	F6ZF77

Gene Model

Click here to download ENSECAG00000018659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000018659's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000018659	SAFB	87	68.342	ENSECAG00000018978	SAFB2	88	76.025

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000018659	SAFB	89	90.949	ENSG00000160633	SAFB	100	90.840	Homo_sapiens
ENSECAG00000018659	SAFB	81	45.599	ENSAPOG00000022508	safb	64	43.960	Acanthochromis_polyacanthus
ENSECAG00000018659	SAFB	89	91.739	ENSAMEG00000012254	SAFB	98	91.518	Ailuropoda_melanoleuca
ENSECAG00000018659	SAFB	81	45.970	ENSAOCG00000006308	safb	67	43.406	Amphiprion_ocellaris
ENSECAG00000018659	SAFB	81	45.055	ENSAPEG00000023342	safb	64	43.072	Amphiprion_percula
ENSECAG00000018659	SAFB	83	64.516	ENSAPLG00000005780	-	100	63.322	Anas_platyrhynchos
ENSECAG00000018659	SAFB	80	61.979	ENSAPLG00000006355	-	99	63.409	Anas_platyrhynchos
ENSECAG00000018659	SAFB	89	90.840	ENSANAG00000028821	SAFB	100	90.731	Aotus_nancymaae
ENSECAG00000018659	SAFB	84	45.161	ENSAMXG00000018154	safb	62	44.260	Astyanax_mexicanus
ENSECAG00000018659	SAFB	89	87.895	ENSBTAG00000007875	SAFB	100	87.786	Bos_taurus
ENSECAG00000018659	SAFB	74	91.455	ENSCJAG00000017081	SAFB	100	94.413	Callithrix_jacchus
ENSECAG00000018659	SAFB	96	91.752	ENSCAFG00000018803	SAFB	93	91.752	Canis_familiaris
ENSECAG00000018659	SAFB	89	92.803	ENSCAFG00020018943	SAFB	100	92.803	Canis_lupus_dingo
ENSECAG00000018659	SAFB	89	86.696	ENSCHIG00000007262	SAFB	100	86.587	Capra_hircus
ENSECAG00000018659	SAFB	52	79.550	ENSTSYG00000001851	-	53	93.704	Carlito_syrichta
ENSECAG00000018659	SAFB	63	73.820	ENSCAPG00000012121	SAFB	77	82.383	Cavia_aperea
ENSECAG00000018659	SAFB	89	86.730	ENSCPOG00000026322	SAFB	100	86.518	Cavia_porcellus
ENSECAG00000018659	SAFB	89	90.959	ENSCCAG00000020193	SAFB	100	90.632	Cebus_capucinus
ENSECAG00000018659	SAFB	89	91.276	ENSCATG00000029994	SAFB	100	91.167	Cercocebus_atys
ENSECAG00000018659	SAFB	89	86.019	ENSCLAG00000007734	SAFB	100	86.766	Chinchilla_lanigera
ENSECAG00000018659	SAFB	89	91.167	ENSCSAG00000009949	SAFB	100	91.058	Chlorocebus_sabaeus
ENSECAG00000018659	SAFB	77	92.857	ENSCHOG00000003208	SAFB	93	92.857	Choloepus_hoffmanni
ENSECAG00000018659	SAFB	81	60.113	ENSCPBG00000010936	-	63	58.053	Chrysemys_picta_bellii
ENSECAG00000018659	SAFB	81	63.314	ENSCPBG00000010928	-	99	62.441	Chrysemys_picta_bellii
ENSECAG00000018659	SAFB	89	85.371	ENSCANG00000019754	-	100	85.371	Colobus_angolensis_palliatus
ENSECAG00000018659	SAFB	87	88.128	ENSCANG00000004774	-	100	89.935	Colobus_angolensis_palliatus
ENSECAG00000018659	SAFB	89	84.435	ENSCGRG00001002254	Safb	100	84.435	Cricetulus_griseus_chok1gshd
ENSECAG00000018659	SAFB	80	81.672	ENSCGRG00000011529	Safb	96	81.558	Cricetulus_griseus_crigri
ENSECAG00000018659	SAFB	87	40.468	ENSCSEG00000019870	safb	65	39.487	Cynoglossus_semilaevis
ENSECAG00000018659	SAFB	83	42.225	ENSDARG00000020467	safb	60	57.500	Danio_rerio
ENSECAG00000018659	SAFB	95	87.054	ENSDNOG00000015746	SAFB	95	87.652	Dasypus_novemcinctus
ENSECAG00000018659	SAFB	89	82.147	ENSDORG00000016200	Safb	100	81.992	Dipodomys_ordii
ENSECAG00000018659	SAFB	71	85.612	ENSETEG00000018679	SAFB	75	84.892	Echinops_telfairi
ENSECAG00000018659	SAFB	94	96.917	ENSEASG00005023019	SAFB	100	98.373	Equus_asinus_asinus
ENSECAG00000018659	SAFB	87	41.888	ENSELUG00000022327	safb	58	57.143	Esox_lucius
ENSECAG00000018659	SAFB	89	92.484	ENSFCAG00000011835	SAFB	100	92.375	Felis_catus
ENSECAG00000018659	SAFB	89	64.731	ENSFALG00000013882	-	89	63.778	Ficedula_albicollis
ENSECAG00000018659	SAFB	81	59.230	ENSFALG00000013881	-	64	58.792	Ficedula_albicollis
ENSECAG00000018659	SAFB	87	78.459	ENSFDAG00000020306	SAFB	100	83.912	Fukomys_damarensis
ENSECAG00000018659	SAFB	53	46.290	ENSGMOG00000014280	safb	63	39.935	Gadus_morhua
ENSECAG00000018659	SAFB	89	64.586	ENSGALG00000013365	-	97	63.960	Gallus_gallus
ENSECAG00000018659	SAFB	89	60.766	ENSGALG00000001948	-	97	63.046	Gallus_gallus
ENSECAG00000018659	SAFB	85	61.207	ENSGAGG00000008424	-	67	59.420	Gopherus_agassizii
ENSECAG00000018659	SAFB	65	58.457	ENSGAGG00000017702	-	100	57.101	Gopherus_agassizii
ENSECAG00000018659	SAFB	89	90.731	ENSGGOG00000015109	SAFB	100	90.622	Gorilla_gorilla
ENSECAG00000018659	SAFB	87	39.822	ENSHBUG00000009218	safb	67	41.864	Haplochromis_burtoni
ENSECAG00000018659	SAFB	89	88.210	ENSHGLG00000015883	SAFB	100	88.210	Heterocephalus_glaber_female
ENSECAG00000018659	SAFB	66	85.407	ENSHGLG00100004228	SAFB	77	85.407	Heterocephalus_glaber_male
ENSECAG00000018659	SAFB	50	48.980	ENSIPUG00000024869	safb2	63	46.465	Ictalurus_punctatus
ENSECAG00000018659	SAFB	83	89.643	ENSSTOG00000002783	SAFB	100	89.643	Ictidomys_tridecemlineatus
ENSECAG00000018659	SAFB	89	84.591	ENSJJAG00000009021	Safb	98	85.278	Jaculus_jaculus
ENSECAG00000018659	SAFB	87	41.774	ENSLBEG00000006015	safb	63	45.017	Labrus_bergylta
ENSECAG00000018659	SAFB	61	51.438	ENSLACG00000018090	SAFB	66	52.827	Latimeria_chalumnae
ENSECAG00000018659	SAFB	86	46.417	ENSLOCG00000003613	safb	74	46.584	Lepisosteus_oculatus
ENSECAG00000018659	SAFB	88	87.922	ENSLAFG00000003840	SAFB	100	86.072	Loxodonta_africana
ENSECAG00000018659	SAFB	89	91.176	ENSMFAG00000003885	SAFB	100	90.850	Macaca_fascicularis
ENSECAG00000018659	SAFB	89	91.276	ENSMMUG00000017970	SAFB	100	91.167	Macaca_mulatta
ENSECAG00000018659	SAFB	89	87.800	ENSMNEG00000035637	SAFB	100	87.473	Macaca_nemestrina
ENSECAG00000018659	SAFB	89	85.668	ENSMLEG00000038637	SAFB	100	85.559	Mandrillus_leucophaeus
ENSECAG00000018659	SAFB	85	41.567	ENSMAMG00000003357	safb	59	40.230	Mastacembelus_armatus
ENSECAG00000018659	SAFB	85	41.785	ENSMZEG00005009120	safb	65	43.688	Maylandia_zebra
ENSECAG00000018659	SAFB	86	62.765	ENSMGAG00000001101	-	97	63.164	Meleagris_gallopavo
ENSECAG00000018659	SAFB	85	57.762	ENSMGAG00000001051	-	96	61.049	Meleagris_gallopavo
ENSECAG00000018659	SAFB	81	78.105	ENSMICG00000046795	-	98	91.489	Microcebus_murinus
ENSECAG00000018659	SAFB	89	87.704	ENSMICG00000008739	-	100	86.725	Microcebus_murinus
ENSECAG00000018659	SAFB	89	84.452	ENSMOCG00000014040	Safb	100	84.345	Microtus_ochrogaster
ENSECAG00000018659	SAFB	89	73.511	ENSMODG00000001236	SAFB	98	74.236	Monodelphis_domestica
ENSECAG00000018659	SAFB	83	41.584	ENSMALG00000020330	safb	68	41.914	Monopterus_albus
ENSECAG00000018659	SAFB	89	83.919	MGP_CAROLIEiJ_G0021780	Safb	100	84.132	Mus_caroli
ENSECAG00000018659	SAFB	89	84.026	ENSMUSG00000071054	Safb	100	84.239	Mus_musculus
ENSECAG00000018659	SAFB	89	83.617	MGP_PahariEiJ_G0020769	Safb	100	83.830	Mus_pahari
ENSECAG00000018659	SAFB	95	91.795	ENSMPUG00000006123	SAFB	99	92.236	Mustela_putorius_furo
ENSECAG00000018659	SAFB	89	90.196	ENSMLUG00000001081	SAFB	100	90.087	Myotis_lucifugus
ENSECAG00000018659	SAFB	89	82.272	ENSNGAG00000019882	Safb	100	81.635	Nannospalax_galili
ENSECAG00000018659	SAFB	89	87.594	ENSNLEG00000013551	SAFB	100	90.671	Nomascus_leucogenys
ENSECAG00000018659	SAFB	79	83.026	ENSOPRG00000011561	-	100	84.379	Ochotona_princeps
ENSECAG00000018659	SAFB	89	88.474	ENSODEG00000014838	SAFB	100	88.367	Octodon_degus
ENSECAG00000018659	SAFB	85	41.731	ENSONIG00000002318	safb	64	43.193	Oreochromis_niloticus
ENSECAG00000018659	SAFB	81	79.207	ENSOCUG00000014628	SAFB	63	81.973	Oryctolagus_cuniculus
ENSECAG00000018659	SAFB	89	86.659	ENSOGAG00000027769	SAFB	100	85.049	Otolemur_garnettii
ENSECAG00000018659	SAFB	89	83.987	ENSOARG00000007662	-	100	81.917	Ovis_aries
ENSECAG00000018659	SAFB	74	80.952	ENSOARG00000007856	-	100	80.672	Ovis_aries
ENSECAG00000018659	SAFB	89	90.741	ENSPPAG00000035129	SAFB	100	90.414	Pan_paniscus
ENSECAG00000018659	SAFB	89	92.484	ENSPPRG00000017197	SAFB	100	92.375	Panthera_pardus
ENSECAG00000018659	SAFB	89	90.741	ENSPTRG00000010335	SAFB	100	90.414	Pan_troglodytes
ENSECAG00000018659	SAFB	89	91.068	ENSPANG00000007770	SAFB	100	90.741	Papio_anubis
ENSECAG00000018659	SAFB	83	42.140	ENSPKIG00000009902	safb	75	55.140	Paramormyrops_kingsleyae
ENSECAG00000018659	SAFB	89	60.526	ENSPSIG00000009367	-	64	58.872	Pelodiscus_sinensis
ENSECAG00000018659	SAFB	89	60.737	ENSPSIG00000011679	-	87	62.484	Pelodiscus_sinensis
ENSECAG00000018659	SAFB	89	85.379	ENSPEMG00000020428	Safb	100	85.272	Peromyscus_maniculatus_bairdii
ENSECAG00000018659	SAFB	52	80.776	ENSPCIG00000009504	-	99	81.526	Phascolarctos_cinereus
ENSECAG00000018659	SAFB	87	38.614	ENSPFOG00000007745	safb	72	41.000	Poecilia_formosa
ENSECAG00000018659	SAFB	87	38.614	ENSPMEG00000021023	safb	56	53.668	Poecilia_mexicana
ENSECAG00000018659	SAFB	89	91.266	ENSPPYG00000009428	SAFB	100	91.266	Pongo_abelii
ENSECAG00000018659	SAFB	89	83.948	ENSPCAG00000006475	SAFB	100	84.165	Procavia_capensis
ENSECAG00000018659	SAFB	89	83.839	ENSPCOG00000014090	SAFB	100	82.863	Propithecus_coquereli
ENSECAG00000018659	SAFB	89	84.205	ENSPVAG00000004913	SAFB	100	84.532	Pteropus_vampyrus
ENSECAG00000018659	SAFB	87	44.168	ENSPNAG00000021838	safb	64	45.847	Pygocentrus_nattereri
ENSECAG00000018659	SAFB	89	83.227	ENSRNOG00000050543	Safb	100	83.758	Rattus_norvegicus
ENSECAG00000018659	SAFB	89	79.498	ENSRBIG00000042509	SAFB	88	93.548	Rhinopithecus_bieti
ENSECAG00000018659	SAFB	89	91.176	ENSRROG00000029278	SAFB	100	90.850	Rhinopithecus_roxellana
ENSECAG00000018659	SAFB	89	91.058	ENSSBOG00000026291	SAFB	100	90.949	Saimiri_boliviensis_boliviensis
ENSECAG00000018659	SAFB	85	43.910	ENSSFOG00015008156	safb	65	46.353	Scleropages_formosus
ENSECAG00000018659	SAFB	87	41.031	ENSSMAG00000009316	safb	64	43.781	Scophthalmus_maximus
ENSECAG00000018659	SAFB	87	42.484	ENSSDUG00000009652	safb	68	41.892	Seriola_dumerili
ENSECAG00000018659	SAFB	87	43.057	ENSSLDG00000001670	safb	64	41.941	Seriola_lalandi_dorsalis
ENSECAG00000018659	SAFB	83	84.561	ENSSARG00000010475	SAFB	100	84.795	Sorex_araneus
ENSECAG00000018659	SAFB	55	55.114	ENSSPUG00000009747	-	67	55.028	Sphenodon_punctatus
ENSECAG00000018659	SAFB	83	41.676	ENSSPAG00000015682	safb	68	41.117	Stegastes_partitus
ENSECAG00000018659	SAFB	92	90.928	ENSSSCG00000013522	SAFB	99	91.902	Sus_scrofa
ENSECAG00000018659	SAFB	84	62.217	ENSTGUG00000000489	-	68	62.876	Taeniopygia_guttata
ENSECAG00000018659	SAFB	86	64.054	ENSTGUG00000000502	-	97	63.940	Taeniopygia_guttata
ENSECAG00000018659	SAFB	86	40.409	ENSTRUG00000003567	safb	64	41.089	Takifugu_rubripes
ENSECAG00000018659	SAFB	81	43.325	ENSTNIG00000015470	safb	73	39.032	Tetraodon_nigroviridis
ENSECAG00000018659	SAFB	66	86.923	ENSTBEG00000013124	-	63	100.000	Tupaia_belangeri
ENSECAG00000018659	SAFB	82	98.413	ENSTTRG00000013588	SAFB	92	98.413	Tursiops_truncatus
ENSECAG00000018659	SAFB	69	92.426	ENSUAMG00000024543	SAFB	99	92.908	Ursus_americanus
ENSECAG00000018659	SAFB	85	88.473	ENSUMAG00000009734	SAFB	96	89.773	Ursus_maritimus
ENSECAG00000018659	SAFB	65	96.899	ENSVPAG00000012043	SAFB	79	96.124	Vicugna_pacos
ENSECAG00000018659	SAFB	99	88.315	ENSVVUG00000013720	SAFB	96	88.218	Vulpes_vulpes
ENSECAG00000018659	SAFB	63	50.247	ENSXETG00000008755	safb	64	69.318	Xenopus_tropicalis
ENSECAG00000018659	SAFB	71	43.225	ENSXMAG00000003458	safb	54	53.232	Xiphophorus_maculatus