EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000018978 (Gene tree)
Gene ID: 100064922
Gene Symbol: SAFB2
Alias: -
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 30233 bases
Position: chr7:3866687-3896919
Accession: 22668
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000035033	RRM_5	PF13893.6	5.9e-07	1	1
ENSECAP00000016839	RRM_5	PF13893.6	1.2e-06	1	1
ENSECAP00000045115	RRM_5	PF13893.6	1.3e-06	1	1
ENSECAP00000016850	RRM_5	PF13893.6	1.3e-06	1	1
ENSECAP00000035033	RRM_1	PF00076.22	4.4e-14	1	1
ENSECAP00000016839	RRM_1	PF00076.22	9.2e-14	1	1
ENSECAP00000045115	RRM_1	PF00076.22	9.6e-14	1	1
ENSECAP00000016850	RRM_1	PF00076.22	9.9e-14	1	1
ENSECAP00000035033	SAP	PF02037.27	1.8e-10	1	1
ENSECAP00000016839	SAP	PF02037.27	3.1e-10	1	1
ENSECAP00000045115	SAP	PF02037.27	3.3e-10	1	1
ENSECAP00000016850	SAP	PF02037.27	3.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000035331	-	2402	-	ENSECAP00000035033	549 (aa)	-	-
ENSECAT00000020511	-	3205	-	ENSECAP00000016839	898 (aa)	-	F7BS42
ENSECAT00000062270	-	3292	-	ENSECAP00000045115	927 (aa)	-	-
ENSECAT00000020524	-	2994	XM_023644506	ENSECAP00000016850	947 (aa)	XP_023500274	F7BLV5

Gene Model

Click here to download ENSECAG00000018978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000018978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000018978	SAFB2	88	76.025	ENSECAG00000018659	SAFB	87	68.342

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000018978	SAFB2	100	83.721	ENSG00000130254	SAFB2	98	83.565	Homo_sapiens
ENSECAG00000018978	SAFB2	100	84.454	ENSAMEG00000012146	SAFB2	98	84.930	Ailuropoda_melanoleuca
ENSECAG00000018978	SAFB2	100	84.053	ENSANAG00000031936	SAFB2	98	83.778	Aotus_nancymaae
ENSECAG00000018978	SAFB2	100	84.257	ENSBTAG00000001790	SAFB2	99	83.316	Bos_taurus
ENSECAG00000018978	SAFB2	100	87.154	ENSCAFG00000018814	SAFB2	98	87.086	Canis_familiaris
ENSECAG00000018978	SAFB2	100	87.154	ENSCAFG00020018939	SAFB2	98	87.086	Canis_lupus_dingo
ENSECAG00000018978	SAFB2	100	84.035	ENSCHIG00000024547	SAFB2	99	83.209	Capra_hircus
ENSECAG00000018978	SAFB2	82	67.702	ENSCAPG00000011771	SAFB2	98	64.405	Cavia_aperea
ENSECAG00000018978	SAFB2	100	76.344	ENSCPOG00000011394	SAFB2	96	76.352	Cavia_porcellus
ENSECAG00000018978	SAFB2	100	83.610	ENSCCAG00000017348	SAFB2	98	84.069	Cebus_capucinus
ENSECAG00000018978	SAFB2	100	83.038	ENSCATG00000039497	SAFB2	98	82.942	Cercocebus_atys
ENSECAG00000018978	SAFB2	100	83.721	ENSCSAG00000009959	SAFB2	98	83.565	Chlorocebus_sabaeus
ENSECAG00000018978	SAFB2	78	72.458	ENSCHOG00000010684	SAFB2	100	72.599	Choloepus_hoffmanni
ENSECAG00000018978	SAFB2	100	80.177	ENSCANG00000024675	SAFB2	98	79.574	Colobus_angolensis_palliatus
ENSECAG00000018978	SAFB2	100	67.619	ENSCGRG00001015833	Safb2	98	67.662	Cricetulus_griseus_chok1gshd
ENSECAG00000018978	SAFB2	100	67.619	ENSCGRG00000011131	Safb2	98	67.662	Cricetulus_griseus_crigri
ENSECAG00000018978	SAFB2	79	75.399	ENSDNOG00000045791	-	94	75.904	Dasypus_novemcinctus
ENSECAG00000018978	SAFB2	100	73.507	ENSDORG00000016199	Safb2	100	73.941	Dipodomys_ordii
ENSECAG00000018978	SAFB2	54	88.235	ENSETEG00000016756	-	50	86.547	Echinops_telfairi
ENSECAG00000018978	SAFB2	88	99.109	ENSEASG00005022952	SAFB2	91	98.683	Equus_asinus_asinus
ENSECAG00000018978	SAFB2	100	86.364	ENSFCAG00000011834	SAFB2	98	85.897	Felis_catus
ENSECAG00000018978	SAFB2	93	77.567	ENSFDAG00000020009	SAFB2	99	77.581	Fukomys_damarensis
ENSECAG00000018978	SAFB2	100	79.648	ENSGGOG00000015093	SAFB2	98	78.685	Gorilla_gorilla
ENSECAG00000018978	SAFB2	100	81.087	ENSHGLG00000017442	SAFB2	98	81.013	Heterocephalus_glaber_female
ENSECAG00000018978	SAFB2	99	79.029	ENSLAFG00000003836	SAFB2	99	77.614	Loxodonta_africana
ENSECAG00000018978	SAFB2	100	83.832	ENSMFAG00000039706	SAFB2	98	83.671	Macaca_fascicularis
ENSECAG00000018978	SAFB2	100	84.164	ENSMMUG00000017968	SAFB2	98	83.991	Macaca_mulatta
ENSECAG00000018978	SAFB2	100	78.170	ENSMNEG00000032042	SAFB2	98	78.215	Macaca_nemestrina
ENSECAG00000018978	SAFB2	100	84.053	ENSMLEG00000034562	SAFB2	98	83.885	Mandrillus_leucophaeus
ENSECAG00000018978	SAFB2	79	76.255	ENSMAUG00000011573	Safb2	90	73.788	Mesocricetus_auratus
ENSECAG00000018978	SAFB2	100	82.262	ENSMICG00000008711	SAFB2	96	82.585	Microcebus_murinus
ENSECAG00000018978	SAFB2	100	67.229	ENSMOCG00000006827	Safb2	98	67.288	Microtus_ochrogaster
ENSECAG00000018978	SAFB2	98	70.021	ENSMODG00000001178	SAFB2	100	69.678	Monodelphis_domestica
ENSECAG00000018978	SAFB2	100	67.539	MGP_CAROLIEiJ_G0021779	Safb2	98	67.890	Mus_caroli
ENSECAG00000018978	SAFB2	100	67.820	ENSMUSG00000042625	Safb2	98	68.163	Mus_musculus
ENSECAG00000018978	SAFB2	100	67.545	MGP_PahariEiJ_G0020768	Safb2	98	67.897	Mus_pahari
ENSECAG00000018978	SAFB2	93	67.618	MGP_SPRETEiJ_G0022690	Safb2	98	60.685	Mus_spretus
ENSECAG00000018978	SAFB2	100	86.822	ENSMPUG00000006106	SAFB2	93	86.660	Mustela_putorius_furo
ENSECAG00000018978	SAFB2	100	81.709	ENSMLUG00000001050	SAFB2	100	80.501	Myotis_lucifugus
ENSECAG00000018978	SAFB2	100	82.705	ENSNLEG00000013514	SAFB2	98	82.585	Nomascus_leucogenys
ENSECAG00000018978	SAFB2	93	67.221	ENSMEUG00000002456	SAFB2	100	66.779	Notamacropus_eugenii
ENSECAG00000018978	SAFB2	100	71.082	ENSOPRG00000011523	-	95	72.757	Ochotona_princeps
ENSECAG00000018978	SAFB2	100	76.923	ENSODEG00000014751	SAFB2	98	77.210	Octodon_degus
ENSECAG00000018978	SAFB2	78	52.174	ENSOANG00000011319	-	92	51.816	Ornithorhynchus_anatinus
ENSECAG00000018978	SAFB2	71	51.253	ENSOANG00000013644	-	100	50.569	Ornithorhynchus_anatinus
ENSECAG00000018978	SAFB2	78	71.462	ENSOCUG00000001592	-	98	71.795	Oryctolagus_cuniculus
ENSECAG00000018978	SAFB2	100	81.361	ENSOGAG00000006855	SAFB2	98	80.683	Otolemur_garnettii
ENSECAG00000018978	SAFB2	93	81.641	ENSOARG00000007982	SAFB2	67	82.068	Ovis_aries
ENSECAG00000018978	SAFB2	100	83.832	ENSPPAG00000043392	SAFB2	98	83.671	Pan_paniscus
ENSECAG00000018978	SAFB2	100	86.585	ENSPPRG00000011310	SAFB2	98	86.111	Panthera_pardus
ENSECAG00000018978	SAFB2	83	83.333	ENSPTIG00000015120	SAFB2	54	82.789	Panthera_tigris_altaica
ENSECAG00000018978	SAFB2	100	78.097	ENSPTRG00000010334	SAFB2	98	78.571	Pan_troglodytes
ENSECAG00000018978	SAFB2	100	83.942	ENSPANG00000007004	SAFB2	98	83.778	Papio_anubis
ENSECAG00000018978	SAFB2	100	65.792	ENSPEMG00000016015	Safb2	98	65.679	Peromyscus_maniculatus_bairdii
ENSECAG00000018978	SAFB2	64	74.384	ENSPCIG00000009518	-	99	78.782	Phascolarctos_cinereus
ENSECAG00000018978	SAFB2	100	84.053	ENSPPYG00000009427	SAFB2	98	83.885	Pongo_abelii
ENSECAG00000018978	SAFB2	99	78.556	ENSPCAG00000006352	SAFB2	99	78.533	Procavia_capensis
ENSECAG00000018978	SAFB2	100	79.712	ENSPCOG00000023260	SAFB2	98	79.634	Propithecus_coquereli
ENSECAG00000018978	SAFB2	78	76.852	ENSPVAG00000004902	-	74	80.435	Pteropus_vampyrus
ENSECAG00000018978	SAFB2	86	67.971	ENSRNOG00000049511	AABR07066522.1	99	67.525	Rattus_norvegicus
ENSECAG00000018978	SAFB2	82	90.403	ENSRBIG00000033446	SAFB2	98	89.730	Rhinopithecus_bieti
ENSECAG00000018978	SAFB2	100	83.942	ENSRROG00000006606	SAFB2	98	83.778	Rhinopithecus_roxellana
ENSECAG00000018978	SAFB2	100	83.056	ENSSBOG00000032315	SAFB2	99	83.147	Saimiri_boliviensis_boliviensis
ENSECAG00000018978	SAFB2	97	71.119	ENSSHAG00000012703	SAFB2	98	70.595	Sarcophilus_harrisii
ENSECAG00000018978	SAFB2	81	72.997	ENSSARG00000000649	SAFB2	100	72.093	Sorex_araneus
ENSECAG00000018978	SAFB2	100	86.932	ENSSSCG00000013523	SAFB2	96	86.980	Sus_scrofa
ENSECAG00000018978	SAFB2	77	77.622	ENSTBEG00000012709	SAFB2	85	71.970	Tupaia_belangeri
ENSECAG00000018978	SAFB2	93	78.740	ENSTTRG00000013585	SAFB2	92	78.923	Tursiops_truncatus
ENSECAG00000018978	SAFB2	100	86.918	ENSUAMG00000024695	SAFB2	97	86.859	Ursus_americanus
ENSECAG00000018978	SAFB2	87	83.023	ENSUMAG00000009585	SAFB2	88	84.854	Ursus_maritimus
ENSECAG00000018978	SAFB2	78	91.099	ENSVPAG00000012041	SAFB2	89	91.099	Vicugna_pacos
ENSECAG00000018978	SAFB2	100	87.043	ENSVVUG00000013695	SAFB2	98	86.980	Vulpes_vulpes