EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000018988 (Gene tree)
Gene ID: 100050094
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 97334 bases
Position: chr22:3899840-3997173
Accession: 25086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000032870	XRN_N	PF03159.18	2.2e-102	1	1
ENSECAP00000016968	XRN_N	PF03159.18	2.2e-102	1	1
ENSECAP00000032737	XRN_N	PF03159.18	2.5e-102	1	1
ENSECAP00000023420	XRN_N	PF03159.18	7e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000054093	-	3835	-	ENSECAP00000032737	944 (aa)	-	-
ENSECAT00000020663	-	3030	-	ENSECAP00000016968	968 (aa)	-	F6UH56
ENSECAT00000049550	-	3703	-	ENSECAP00000023420	900 (aa)	-	-
ENSECAT00000051605	-	3943	-	ENSECAP00000032870	980 (aa)	-	-

Gene Model

Click here to download ENSECAG00000018988's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03008	Ribosome biogenesis in eukaryotes	KEGG
ecb03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000018988's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000018988	XRN2	96	100.000	ENSG00000088930	XRN2	99	97.888	Homo_sapiens
ENSECAG00000018988	XRN2	93	92.308	ENSAPOG00000009818	xrn2	94	92.308	Acanthochromis_polyacanthus
ENSECAG00000018988	XRN2	100	96.281	ENSAMEG00000012581	XRN2	99	98.099	Ailuropoda_melanoleuca
ENSECAG00000018988	XRN2	85	92.308	ENSACIG00000015047	xrn2	87	92.308	Amphilophus_citrinellus
ENSECAG00000018988	XRN2	93	92.308	ENSAOCG00000023632	xrn2	94	92.308	Amphiprion_ocellaris
ENSECAG00000018988	XRN2	93	92.308	ENSAPEG00000014871	xrn2	94	92.308	Amphiprion_percula
ENSECAG00000018988	XRN2	92	88.462	ENSATEG00000001273	xrn2	92	88.462	Anabas_testudineus
ENSECAG00000018988	XRN2	97	81.501	ENSAPLG00000013869	XRN2	99	83.369	Anas_platyrhynchos
ENSECAG00000018988	XRN2	100	79.124	ENSACAG00000005565	XRN2	99	80.478	Anolis_carolinensis
ENSECAG00000018988	XRN2	96	100.000	ENSANAG00000020126	XRN2	99	97.466	Aotus_nancymaae
ENSECAG00000018988	XRN2	86	92.308	ENSACLG00000010522	xrn2	91	92.308	Astatotilapia_calliptera
ENSECAG00000018988	XRN2	96	88.462	ENSAMXG00000018301	xrn2	94	88.462	Astyanax_mexicanus
ENSECAG00000018988	XRN2	96	100.000	ENSBTAG00000011304	XRN2	99	95.886	Bos_taurus
ENSECAG00000018988	XRN2	87	55.263	WBGene00006964	xrn-2	88	56.185	Caenorhabditis_elegans
ENSECAG00000018988	XRN2	96	100.000	ENSCJAG00000005611	XRN2	99	97.571	Callithrix_jacchus
ENSECAG00000018988	XRN2	100	96.178	ENSCAFG00000005185	XRN2	99	97.994	Canis_familiaris
ENSECAG00000018988	XRN2	100	96.178	ENSCAFG00020027479	XRN2	99	97.994	Canis_lupus_dingo
ENSECAG00000018988	XRN2	96	100.000	ENSCHIG00000006921	XRN2	99	95.886	Capra_hircus
ENSECAG00000018988	XRN2	96	100.000	ENSTSYG00000008315	XRN2	99	96.727	Carlito_syrichta
ENSECAG00000018988	XRN2	97	80.741	ENSCAPG00000010773	XRN2	99	82.143	Cavia_aperea
ENSECAG00000018988	XRN2	96	100.000	ENSCPOG00000009407	XRN2	99	97.677	Cavia_porcellus
ENSECAG00000018988	XRN2	100	96.178	ENSCATG00000040350	XRN2	99	98.099	Cercocebus_atys
ENSECAG00000018988	XRN2	96	100.000	ENSCLAG00000013419	XRN2	99	97.571	Chinchilla_lanigera
ENSECAG00000018988	XRN2	100	96.178	ENSCSAG00000011094	XRN2	99	98.099	Chlorocebus_sabaeus
ENSECAG00000018988	XRN2	69	99.462	ENSCHOG00000013404	XRN2	70	99.462	Choloepus_hoffmanni
ENSECAG00000018988	XRN2	95	96.000	ENSCPBG00000023533	XRN2	94	96.000	Chrysemys_picta_bellii
ENSECAG00000018988	XRN2	82	80.769	ENSCING00000022336	-	92	80.769	Ciona_intestinalis
ENSECAG00000018988	XRN2	78	69.053	ENSCSAVG00000011217	-	100	61.787	Ciona_savignyi
ENSECAG00000018988	XRN2	100	96.178	ENSCANG00000040240	XRN2	99	98.099	Colobus_angolensis_palliatus
ENSECAG00000018988	XRN2	94	100.000	ENSCGRG00001010676	Xrn2	99	96.233	Cricetulus_griseus_chok1gshd
ENSECAG00000018988	XRN2	97	93.439	ENSCGRG00000006378	Xrn2	99	95.455	Cricetulus_griseus_crigri
ENSECAG00000018988	XRN2	55	69.886	ENSCSEG00000005628	xrn2	89	92.308	Cynoglossus_semilaevis
ENSECAG00000018988	XRN2	85	92.308	ENSCVAG00000018999	xrn2	92	92.308	Cyprinodon_variegatus
ENSECAG00000018988	XRN2	96	92.308	ENSDARG00000101900	xrn2	94	92.308	Danio_rerio
ENSECAG00000018988	XRN2	96	100.000	ENSDNOG00000001895	XRN2	99	97.149	Dasypus_novemcinctus
ENSECAG00000018988	XRN2	96	100.000	ENSDORG00000005434	Xrn2	99	95.037	Dipodomys_ordii
ENSECAG00000018988	XRN2	87	55.621	FBgn0031868	Rat1	87	56.953	Drosophila_melanogaster
ENSECAG00000018988	XRN2	96	96.000	ENSETEG00000001740	XRN2	94	96.000	Echinops_telfairi
ENSECAG00000018988	XRN2	80	92.000	ENSEBUG00000016136	xrn2	91	92.000	Eptatretus_burgeri
ENSECAG00000018988	XRN2	100	98.037	ENSEASG00005002484	XRN2	99	99.894	Equus_asinus_asinus
ENSECAG00000018988	XRN2	85	100.000	ENSEEUG00000009265	XRN2	80	100.000	Erinaceus_europaeus
ENSECAG00000018988	XRN2	96	84.615	ENSELUG00000000552	xrn2	94	84.615	Esox_lucius
ENSECAG00000018988	XRN2	100	96.384	ENSFCAG00000007970	XRN2	99	98.205	Felis_catus
ENSECAG00000018988	XRN2	95	96.154	ENSFALG00000004508	XRN2	94	96.154	Ficedula_albicollis
ENSECAG00000018988	XRN2	96	100.000	ENSFDAG00000016311	XRN2	99	97.360	Fukomys_damarensis
ENSECAG00000018988	XRN2	55	69.303	ENSFHEG00000013039	xrn2	88	88.462	Fundulus_heteroclitus
ENSECAG00000018988	XRN2	82	84.000	ENSGMOG00000013436	xrn2	93	84.000	Gadus_morhua
ENSECAG00000018988	XRN2	96	100.000	ENSGALG00000008372	XRN2	94	100.000	Gallus_gallus
ENSECAG00000018988	XRN2	86	92.308	ENSGAFG00000014284	xrn2	92	92.308	Gambusia_affinis
ENSECAG00000018988	XRN2	88	73.443	ENSGACG00000011870	xrn2	100	75.000	Gasterosteus_aculeatus
ENSECAG00000018988	XRN2	95	92.000	ENSGAGG00000004884	XRN2	94	92.000	Gopherus_agassizii
ENSECAG00000018988	XRN2	100	96.074	ENSGGOG00000013738	XRN2	99	97.994	Gorilla_gorilla
ENSECAG00000018988	XRN2	55	73.408	ENSHBUG00000005077	xrn2	85	92.308	Haplochromis_burtoni
ENSECAG00000018988	XRN2	96	100.000	ENSHGLG00000014831	XRN2	99	96.199	Heterocephalus_glaber_female
ENSECAG00000018988	XRN2	96	100.000	ENSHGLG00100013130	XRN2	99	96.199	Heterocephalus_glaber_male
ENSECAG00000018988	XRN2	96	92.308	ENSHCOG00000011994	xrn2	94	92.308	Hippocampus_comes
ENSECAG00000018988	XRN2	96	92.308	ENSIPUG00000006639	xrn2	94	92.308	Ictalurus_punctatus
ENSECAG00000018988	XRN2	100	96.074	ENSSTOG00000000589	XRN2	99	97.888	Ictidomys_tridecemlineatus
ENSECAG00000018988	XRN2	96	100.000	ENSJJAG00000022128	Xrn2	99	96.727	Jaculus_jaculus
ENSECAG00000018988	XRN2	55	77.170	ENSLBEG00000010041	xrn2	100	79.688	Labrus_bergylta
ENSECAG00000018988	XRN2	94	75.602	ENSLACG00000008307	XRN2	99	79.387	Latimeria_chalumnae
ENSECAG00000018988	XRN2	96	88.462	ENSLOCG00000016874	xrn2	94	88.462	Lepisosteus_oculatus
ENSECAG00000018988	XRN2	96	100.000	ENSLAFG00000014624	XRN2	99	96.621	Loxodonta_africana
ENSECAG00000018988	XRN2	100	96.178	ENSMFAG00000038122	XRN2	99	98.099	Macaca_fascicularis
ENSECAG00000018988	XRN2	100	96.178	ENSMMUG00000011405	XRN2	99	98.099	Macaca_mulatta
ENSECAG00000018988	XRN2	100	96.074	ENSMNEG00000040626	XRN2	99	97.994	Macaca_nemestrina
ENSECAG00000018988	XRN2	100	96.074	ENSMLEG00000041897	XRN2	99	97.994	Mandrillus_leucophaeus
ENSECAG00000018988	XRN2	92	88.462	ENSMAMG00000008633	xrn2	93	88.462	Mastacembelus_armatus
ENSECAG00000018988	XRN2	86	92.308	ENSMZEG00005022362	xrn2	91	92.308	Maylandia_zebra
ENSECAG00000018988	XRN2	96	95.652	ENSMGAG00000003196	XRN2	99	81.342	Meleagris_gallopavo
ENSECAG00000018988	XRN2	96	100.000	ENSMAUG00000021842	Xrn2	99	96.304	Mesocricetus_auratus
ENSECAG00000018988	XRN2	96	100.000	ENSMICG00000008126	XRN2	99	97.149	Microcebus_murinus
ENSECAG00000018988	XRN2	96	100.000	ENSMOCG00000012588	Xrn2	99	96.093	Microtus_ochrogaster
ENSECAG00000018988	XRN2	85	92.308	ENSMMOG00000017576	xrn2	90	92.308	Mola_mola
ENSECAG00000018988	XRN2	96	100.000	ENSMODG00000006163	XRN2	94	100.000	Monodelphis_domestica
ENSECAG00000018988	XRN2	86	84.615	ENSMALG00000011355	xrn2	92	84.615	Monopterus_albus
ENSECAG00000018988	XRN2	96	100.000	MGP_CAROLIEiJ_G0024400	Xrn2	99	95.148	Mus_caroli
ENSECAG00000018988	XRN2	96	100.000	ENSMUSG00000027433	Xrn2	99	95.359	Mus_musculus
ENSECAG00000018988	XRN2	100	93.395	MGP_PahariEiJ_G0025843	Xrn2	99	95.148	Mus_pahari
ENSECAG00000018988	XRN2	96	100.000	MGP_SPRETEiJ_G0025318	Xrn2	99	95.359	Mus_spretus
ENSECAG00000018988	XRN2	96	100.000	ENSMPUG00000001198	XRN2	93	96.369	Mustela_putorius_furo
ENSECAG00000018988	XRN2	96	100.000	ENSMLUG00000001536	XRN2	99	97.571	Myotis_lucifugus
ENSECAG00000018988	XRN2	96	100.000	ENSNGAG00000018138	Xrn2	99	96.621	Nannospalax_galili
ENSECAG00000018988	XRN2	86	92.308	ENSNBRG00000008062	xrn2	91	92.308	Neolamprologus_brichardi
ENSECAG00000018988	XRN2	100	96.074	ENSNLEG00000009991	XRN2	99	97.994	Nomascus_leucogenys
ENSECAG00000018988	XRN2	65	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSECAG00000018988	XRN2	66	97.260	ENSOPRG00000001397	-	73	90.476	Ochotona_princeps
ENSECAG00000018988	XRN2	98	86.349	ENSODEG00000000860	-	99	88.457	Octodon_degus
ENSECAG00000018988	XRN2	96	100.000	ENSODEG00000010745	-	99	97.149	Octodon_degus
ENSECAG00000018988	XRN2	96	92.308	ENSONIG00000018720	xrn2	94	92.308	Oreochromis_niloticus
ENSECAG00000018988	XRN2	96	96.000	ENSOANG00000015673	XRN2	99	91.043	Ornithorhynchus_anatinus
ENSECAG00000018988	XRN2	96	100.000	ENSOCUG00000013468	XRN2	99	97.782	Oryctolagus_cuniculus
ENSECAG00000018988	XRN2	95	92.308	ENSORLG00000017213	xrn2	94	92.308	Oryzias_latipes
ENSECAG00000018988	XRN2	95	92.308	ENSORLG00020001824	xrn2	94	92.308	Oryzias_latipes_hni
ENSECAG00000018988	XRN2	95	92.308	ENSORLG00015019747	xrn2	94	92.308	Oryzias_latipes_hsok
ENSECAG00000018988	XRN2	94	92.308	ENSOMEG00000019820	xrn2	94	92.308	Oryzias_melastigma
ENSECAG00000018988	XRN2	100	95.351	ENSOGAG00000001068	XRN2	99	97.046	Otolemur_garnettii
ENSECAG00000018988	XRN2	97	93.962	ENSOARG00000004443	XRN2	99	95.775	Ovis_aries
ENSECAG00000018988	XRN2	100	96.074	ENSPPAG00000033549	XRN2	99	97.994	Pan_paniscus
ENSECAG00000018988	XRN2	100	96.384	ENSPPRG00000008732	XRN2	99	98.205	Panthera_pardus
ENSECAG00000018988	XRN2	97	96.288	ENSPTIG00000015683	XRN2	97	98.156	Panthera_tigris_altaica
ENSECAG00000018988	XRN2	100	96.074	ENSPTRG00000013308	XRN2	99	97.994	Pan_troglodytes
ENSECAG00000018988	XRN2	100	96.178	ENSPANG00000018088	XRN2	99	98.099	Papio_anubis
ENSECAG00000018988	XRN2	96	88.462	ENSPKIG00000016889	xrn2	94	88.462	Paramormyrops_kingsleyae
ENSECAG00000018988	XRN2	81	85.204	ENSPSIG00000014666	XRN2	100	86.979	Pelodiscus_sinensis
ENSECAG00000018988	XRN2	96	100.000	ENSPEMG00000000111	Xrn2	99	95.776	Peromyscus_maniculatus_bairdii
ENSECAG00000018988	XRN2	96	92.308	ENSPFOG00000004182	xrn2	94	92.308	Poecilia_formosa
ENSECAG00000018988	XRN2	88	92.308	ENSPLAG00000007351	xrn2	92	92.308	Poecilia_latipinna
ENSECAG00000018988	XRN2	94	68.387	ENSPMEG00000011798	xrn2	99	69.880	Poecilia_mexicana
ENSECAG00000018988	XRN2	85	92.308	ENSPREG00000012452	xrn2	93	92.308	Poecilia_reticulata
ENSECAG00000018988	XRN2	96	100.000	ENSPPYG00000010755	XRN2	99	97.677	Pongo_abelii
ENSECAG00000018988	XRN2	96	100.000	ENSPCAG00000011191	XRN2	94	100.000	Procavia_capensis
ENSECAG00000018988	XRN2	96	100.000	ENSPCOG00000016468	XRN2	94	100.000	Propithecus_coquereli
ENSECAG00000018988	XRN2	93	94.833	ENSPVAG00000004596	XRN2	93	94.833	Pteropus_vampyrus
ENSECAG00000018988	XRN2	86	92.308	ENSPNYG00000001765	xrn2	91	92.308	Pundamilia_nyererei
ENSECAG00000018988	XRN2	96	96.154	ENSPNAG00000010956	xrn2	94	96.154	Pygocentrus_nattereri
ENSECAG00000018988	XRN2	96	100.000	ENSRNOG00000011785	Xrn2	99	96.203	Rattus_norvegicus
ENSECAG00000018988	XRN2	86	96.292	ENSRBIG00000036193	XRN2	100	98.411	Rhinopithecus_bieti
ENSECAG00000018988	XRN2	100	96.178	ENSRROG00000044400	XRN2	90	98.099	Rhinopithecus_roxellana
ENSECAG00000018988	XRN2	75	48.069	YOR048C	RAT1	63	53.846	Saccharomyces_cerevisiae
ENSECAG00000018988	XRN2	96	100.000	ENSSBOG00000021014	XRN2	99	97.782	Saimiri_boliviensis_boliviensis
ENSECAG00000018988	XRN2	96	88.462	ENSSFOG00015001091	xrn2	94	88.462	Scleropages_formosus
ENSECAG00000018988	XRN2	88	88.462	ENSSMAG00000007834	xrn2	94	88.462	Scophthalmus_maximus
ENSECAG00000018988	XRN2	86	88.462	ENSSDUG00000012802	xrn2	92	88.462	Seriola_dumerili
ENSECAG00000018988	XRN2	89	88.462	ENSSLDG00000021273	xrn2	94	88.462	Seriola_lalandi_dorsalis
ENSECAG00000018988	XRN2	80	100.000	ENSSARG00000005859	-	76	100.000	Sorex_araneus
ENSECAG00000018988	XRN2	94	88.000	ENSSPUG00000005485	XRN2	90	88.000	Sphenodon_punctatus
ENSECAG00000018988	XRN2	93	88.462	ENSSPAG00000016027	xrn2	94	88.462	Stegastes_partitus
ENSECAG00000018988	XRN2	96	100.000	ENSSSCG00000007109	XRN2	99	95.565	Sus_scrofa
ENSECAG00000018988	XRN2	95	100.000	ENSTGUG00000007535	XRN2	94	100.000	Taeniopygia_guttata
ENSECAG00000018988	XRN2	96	92.308	ENSTRUG00000015489	xrn2	94	92.308	Takifugu_rubripes
ENSECAG00000018988	XRN2	96	92.308	ENSTNIG00000010712	xrn2	94	92.308	Tetraodon_nigroviridis
ENSECAG00000018988	XRN2	96	100.000	ENSTBEG00000004119	XRN2	99	97.254	Tupaia_belangeri
ENSECAG00000018988	XRN2	89	100.000	ENSTTRG00000009087	XRN2	93	98.378	Tursiops_truncatus
ENSECAG00000018988	XRN2	100	96.384	ENSUAMG00000024634	XRN2	98	100.000	Ursus_americanus
ENSECAG00000018988	XRN2	97	96.076	ENSUMAG00000004012	XRN2	94	97.939	Ursus_maritimus
ENSECAG00000018988	XRN2	94	89.786	ENSVPAG00000010694	XRN2	85	97.735	Vicugna_pacos
ENSECAG00000018988	XRN2	100	96.281	ENSVVUG00000012178	XRN2	99	98.099	Vulpes_vulpes
ENSECAG00000018988	XRN2	97	92.000	ENSXETG00000023501	xrn2	94	92.000	Xenopus_tropicalis
ENSECAG00000018988	XRN2	96	92.308	ENSXMAG00000000242	xrn2	94	92.308	Xiphophorus_maculatus