EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000019114 (Gene tree)
Gene ID: 100050822
Gene Symbol: R3HDM1
Alias: -
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 115024 bases
Position: chr18:19500301-19615324
Accession: 22081
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000028462	R3H	PF01424.22	2.8e-11	1	1
ENSECAP00000025911	R3H	PF01424.22	3e-11	1	1
ENSECAP00000017268	R3H	PF01424.22	3e-11	1	1
ENSECAP00000025223	R3H	PF01424.22	3.1e-11	1	1
ENSECAP00000017308	R3H	PF01424.22	3.1e-11	1	1
ENSECAP00000032325	R3H	PF01424.22	3.2e-11	1	1
ENSECAP00000024218	R3H	PF01424.22	1.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000044522	-	3462	-	ENSECAP00000024218	1070 (aa)	-	-
ENSECAT00000064428	-	3612	-	ENSECAP00000025223	1120 (aa)	XP_023478601	UPI000C9DCF6E
ENSECAT00000041957	-	3576	-	ENSECAP00000025911	1108 (aa)	-	-
ENSECAT00000020996	-	3552	-	ENSECAP00000017268	1100 (aa)	XP_014587931	F7CGQ5
ENSECAT00000021039	-	3654	-	ENSECAP00000017308	1134 (aa)	XP_023478598	F7BV72
ENSECAT00000055805	-	3399	-	ENSECAP00000028462	1049 (aa)	XP_023478605	UPI000C9DD4F9
ENSECAT00000040328	-	3603	-	ENSECAP00000032325	1117 (aa)	-	-

Gene Model

Click here to download ENSECAG00000019114's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000019114's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000019114	R3HDM1	99	51.859	ENSECAG00000003157	R3HDM2	96	60.459
ENSECAG00000019114	R3HDM1	65	61.081	ENSECAG00000022872	ARPP21	92	50.555

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000019114	R3HDM1	100	95.558	ENSG00000048991	R3HDM1	99	98.066	Homo_sapiens
ENSECAG00000019114	R3HDM1	89	62.053	ENSAPOG00000020850	r3hdm1	92	61.814	Acanthochromis_polyacanthus
ENSECAG00000019114	R3HDM1	100	97.371	ENSAMEG00000014886	R3HDM1	100	97.371	Ailuropoda_melanoleuca
ENSECAG00000019114	R3HDM1	88	61.814	ENSAOCG00000005192	r3hdm1	95	61.575	Amphiprion_ocellaris
ENSECAG00000019114	R3HDM1	88	56.325	ENSAPEG00000016108	r3hdm1	95	56.325	Amphiprion_percula
ENSECAG00000019114	R3HDM1	88	56.459	ENSATEG00000000232	r3hdm1	99	48.206	Anabas_testudineus
ENSECAG00000019114	R3HDM1	100	79.566	ENSAPLG00000015231	R3HDM1	100	79.747	Anas_platyrhynchos
ENSECAG00000019114	R3HDM1	100	85.222	ENSACAG00000001676	R3HDM1	100	80.193	Anolis_carolinensis
ENSECAG00000019114	R3HDM1	100	95.652	ENSANAG00000035334	R3HDM1	99	97.238	Aotus_nancymaae
ENSECAG00000019114	R3HDM1	78	68.269	ENSACLG00000027282	r3hdm1	89	68.269	Astatotilapia_calliptera
ENSECAG00000019114	R3HDM1	62	40.057	ENSAMXG00000020587	arpp21	88	39.337	Astyanax_mexicanus
ENSECAG00000019114	R3HDM1	88	72.414	ENSAMXG00000003536	r3hdm1	92	72.334	Astyanax_mexicanus
ENSECAG00000019114	R3HDM1	100	72.596	ENSAMXG00000012861	R3HDM1	100	72.596	Astyanax_mexicanus
ENSECAG00000019114	R3HDM1	100	95.242	ENSBTAG00000013302	R3HDM1	100	95.683	Bos_taurus
ENSECAG00000019114	R3HDM1	100	95.735	ENSCJAG00000011718	R3HDM1	99	97.238	Callithrix_jacchus
ENSECAG00000019114	R3HDM1	100	97.824	ENSCAFG00000005075	R3HDM1	100	97.824	Canis_familiaris
ENSECAG00000019114	R3HDM1	100	99.261	ENSCAFG00020016119	R3HDM1	100	97.913	Canis_lupus_dingo
ENSECAG00000019114	R3HDM1	100	97.291	ENSCHIG00000020851	R3HDM1	100	95.731	Capra_hircus
ENSECAG00000019114	R3HDM1	100	93.103	ENSCPOG00000012784	R3HDM1	100	92.619	Cavia_porcellus
ENSECAG00000019114	R3HDM1	100	95.281	ENSCCAG00000027199	R3HDM1	99	96.409	Cebus_capucinus
ENSECAG00000019114	R3HDM1	100	97.476	ENSCATG00000023642	R3HDM1	99	97.514	Cercocebus_atys
ENSECAG00000019114	R3HDM1	100	95.074	ENSCLAG00000007962	R3HDM1	100	94.425	Chinchilla_lanigera
ENSECAG00000019114	R3HDM1	100	97.291	ENSCSAG00000016356	R3HDM1	100	94.283	Chlorocebus_sabaeus
ENSECAG00000019114	R3HDM1	87	84.732	ENSCHOG00000013638	R3HDM1	91	84.732	Choloepus_hoffmanni
ENSECAG00000019114	R3HDM1	87	91.144	ENSCPBG00000009645	R3HDM1	100	91.144	Chrysemys_picta_bellii
ENSECAG00000019114	R3HDM1	100	95.109	ENSCANG00000034748	R3HDM1	99	97.238	Colobus_angolensis_palliatus
ENSECAG00000019114	R3HDM1	99	95.320	ENSCGRG00001012357	R3hdm1	97	91.703	Cricetulus_griseus_chok1gshd
ENSECAG00000019114	R3HDM1	100	95.320	ENSCGRG00000012080	R3hdm1	100	95.819	Cricetulus_griseus_crigri
ENSECAG00000019114	R3HDM1	88	56.835	ENSCSEG00000008944	r3hdm1	85	64.918	Cynoglossus_semilaevis
ENSECAG00000019114	R3HDM1	88	59.905	ENSCVAG00000007582	r3hdm1	91	59.666	Cyprinodon_variegatus
ENSECAG00000019114	R3HDM1	65	37.600	ENSDARG00000061081	arpp21	95	35.570	Danio_rerio
ENSECAG00000019114	R3HDM1	100	91.780	ENSDNOG00000000771	R3HDM1	100	91.780	Dasypus_novemcinctus
ENSECAG00000019114	R3HDM1	92	92.629	ENSETEG00000013606	R3HDM1	100	83.833	Echinops_telfairi
ENSECAG00000019114	R3HDM1	65	42.021	ENSEBUG00000014746	arpp21	97	43.313	Eptatretus_burgeri
ENSECAG00000019114	R3HDM1	100	99.727	ENSEASG00005007392	R3HDM1	100	99.727	Equus_asinus_asinus
ENSECAG00000019114	R3HDM1	91	87.454	ENSEEUG00000012589	R3HDM1	91	87.085	Erinaceus_europaeus
ENSECAG00000019114	R3HDM1	88	66.430	ENSELUG00000004909	R3HDM1	99	55.742	Esox_lucius
ENSECAG00000019114	R3HDM1	93	50.809	ENSELUG00000014413	r3hdm1	100	51.935	Esox_lucius
ENSECAG00000019114	R3HDM1	100	99.015	ENSFCAG00000027113	R3HDM1	100	97.457	Felis_catus
ENSECAG00000019114	R3HDM1	75	75.963	ENSFALG00000013731	R3HDM1	93	70.773	Ficedula_albicollis
ENSECAG00000019114	R3HDM1	100	95.074	ENSFDAG00000016478	R3HDM1	100	94.774	Fukomys_damarensis
ENSECAG00000019114	R3HDM1	88	60.143	ENSFHEG00000018713	r3hdm1	91	59.666	Fundulus_heteroclitus
ENSECAG00000019114	R3HDM1	60	69.348	ENSGMOG00000006042	-	74	69.565	Gadus_morhua
ENSECAG00000019114	R3HDM1	100	71.171	ENSGALG00000012246	R3HDM1	99	90.278	Gallus_gallus
ENSECAG00000019114	R3HDM1	89	45.747	ENSGAFG00000006203	r3hdm1	89	68.608	Gambusia_affinis
ENSECAG00000019114	R3HDM1	86	66.379	ENSGACG00000014925	r3hdm1	94	66.569	Gasterosteus_aculeatus
ENSECAG00000019114	R3HDM1	100	78.714	ENSGAGG00000007840	R3HDM1	100	78.170	Gopherus_agassizii
ENSECAG00000019114	R3HDM1	100	95.195	ENSGGOG00000008156	R3HDM1	99	98.066	Gorilla_gorilla
ENSECAG00000019114	R3HDM1	100	95.074	ENSHGLG00000015718	R3HDM1	100	94.774	Heterocephalus_glaber_female
ENSECAG00000019114	R3HDM1	100	94.828	ENSHGLG00100003184	-	100	94.425	Heterocephalus_glaber_male
ENSECAG00000019114	R3HDM1	100	70.027	ENSHGLG00100015374	-	99	71.087	Heterocephalus_glaber_male
ENSECAG00000019114	R3HDM1	78	65.909	ENSHCOG00000013366	r3hdm1	85	66.883	Hippocampus_comes
ENSECAG00000019114	R3HDM1	87	67.470	ENSIPUG00000013629	r3hdm1	95	70.096	Ictalurus_punctatus
ENSECAG00000019114	R3HDM1	81	72.222	ENSIPUG00000001676	R3HDM1	99	68.317	Ictalurus_punctatus
ENSECAG00000019114	R3HDM1	62	35.364	ENSIPUG00000020552	arpp21	85	35.251	Ictalurus_punctatus
ENSECAG00000019114	R3HDM1	100	96.305	ENSSTOG00000007572	R3HDM1	100	96.167	Ictidomys_tridecemlineatus
ENSECAG00000019114	R3HDM1	95	73.766	ENSLACG00000005334	R3HDM1	100	74.205	Latimeria_chalumnae
ENSECAG00000019114	R3HDM1	100	66.815	ENSLOCG00000001641	r3hdm1	100	66.408	Lepisosteus_oculatus
ENSECAG00000019114	R3HDM1	100	94.978	ENSLAFG00000009065	R3HDM1	100	94.978	Loxodonta_africana
ENSECAG00000019114	R3HDM1	100	95.648	ENSMFAG00000030331	R3HDM1	100	97.537	Macaca_fascicularis
ENSECAG00000019114	R3HDM1	100	95.100	ENSMMUG00000009844	R3HDM1	99	98.066	Macaca_mulatta
ENSECAG00000019114	R3HDM1	100	95.467	ENSMNEG00000027793	R3HDM1	100	97.537	Macaca_nemestrina
ENSECAG00000019114	R3HDM1	100	95.558	ENSMLEG00000043189	R3HDM1	99	98.066	Mandrillus_leucophaeus
ENSECAG00000019114	R3HDM1	88	60.859	ENSMAMG00000004532	r3hdm1	91	60.859	Mastacembelus_armatus
ENSECAG00000019114	R3HDM1	88	60.859	ENSMZEG00005003157	r3hdm1	89	68.269	Maylandia_zebra
ENSECAG00000019114	R3HDM1	100	79.095	ENSMGAG00000012461	R3HDM1	100	79.095	Meleagris_gallopavo
ENSECAG00000019114	R3HDM1	100	95.813	ENSMAUG00000010315	R3hdm1	100	96.167	Mesocricetus_auratus
ENSECAG00000019114	R3HDM1	100	94.112	ENSMICG00000005900	-	99	96.685	Microcebus_murinus
ENSECAG00000019114	R3HDM1	95	85.030	ENSMICG00000042655	-	100	96.409	Microcebus_murinus
ENSECAG00000019114	R3HDM1	89	87.799	ENSMODG00000000923	R3HDM1	97	82.190	Monodelphis_domestica
ENSECAG00000019114	R3HDM1	99	59.762	ENSMALG00000009000	r3hdm1	91	60.000	Monopterus_albus
ENSECAG00000019114	R3HDM1	100	94.581	MGP_CAROLIEiJ_G0014543	R3hdm1	100	95.122	Mus_caroli
ENSECAG00000019114	R3HDM1	100	94.581	ENSMUSG00000056211	R3hdm1	100	95.122	Mus_musculus
ENSECAG00000019114	R3HDM1	100	94.335	MGP_PahariEiJ_G0027779	R3hdm1	100	94.979	Mus_pahari
ENSECAG00000019114	R3HDM1	100	94.581	MGP_SPRETEiJ_G0015350	R3hdm1	100	95.122	Mus_spretus
ENSECAG00000019114	R3HDM1	100	97.366	ENSMPUG00000002412	R3HDM1	100	97.366	Mustela_putorius_furo
ENSECAG00000019114	R3HDM1	100	95.118	ENSMLUG00000013824	R3HDM1	100	95.027	Myotis_lucifugus
ENSECAG00000019114	R3HDM1	100	95.376	ENSNLEG00000008622	R3HDM1	99	97.514	Nomascus_leucogenys
ENSECAG00000019114	R3HDM1	89	74.388	ENSMEUG00000011784	R3HDM1	100	74.388	Notamacropus_eugenii
ENSECAG00000019114	R3HDM1	100	91.725	ENSODEG00000008607	R3HDM1	100	95.819	Octodon_degus
ENSECAG00000019114	R3HDM1	94	65.928	ENSONIG00000012017	r3hdm1	93	66.185	Oreochromis_niloticus
ENSECAG00000019114	R3HDM1	100	82.475	ENSOANG00000007987	R3HDM1	100	82.475	Ornithorhynchus_anatinus
ENSECAG00000019114	R3HDM1	89	93.896	ENSOCUG00000017366	R3HDM1	98	93.896	Oryctolagus_cuniculus
ENSECAG00000019114	R3HDM1	88	60.382	ENSORLG00000004297	r3hdm1	86	67.419	Oryzias_latipes
ENSECAG00000019114	R3HDM1	88	60.621	ENSORLG00015017355	r3hdm1	85	67.742	Oryzias_latipes_hsok
ENSECAG00000019114	R3HDM1	100	95.095	ENSOGAG00000003136	R3HDM1	100	95.095	Otolemur_garnettii
ENSECAG00000019114	R3HDM1	100	95.459	ENSOARG00000010788	R3HDM1	100	95.459	Ovis_aries
ENSECAG00000019114	R3HDM1	100	95.385	ENSPPAG00000027858	R3HDM1	99	98.066	Pan_paniscus
ENSECAG00000019114	R3HDM1	100	97.184	ENSPPRG00000002626	R3HDM1	99	98.895	Panthera_pardus
ENSECAG00000019114	R3HDM1	100	97.184	ENSPTIG00000016581	R3HDM1	99	99.171	Panthera_tigris_altaica
ENSECAG00000019114	R3HDM1	100	95.018	ENSPTRG00000012494	R3HDM1	99	98.066	Pan_troglodytes
ENSECAG00000019114	R3HDM1	100	95.467	ENSPANG00000026448	R3HDM1	99	98.066	Papio_anubis
ENSECAG00000019114	R3HDM1	86	76.433	ENSPKIG00000004328	r3hdm1	91	76.508	Paramormyrops_kingsleyae
ENSECAG00000019114	R3HDM1	100	78.714	ENSPSIG00000012915	R3HDM1	100	78.623	Pelodiscus_sinensis
ENSECAG00000019114	R3HDM1	100	94.828	ENSPEMG00000015187	R3hdm1	100	95.819	Peromyscus_maniculatus_bairdii
ENSECAG00000019114	R3HDM1	100	86.011	ENSPCIG00000002491	R3HDM1	100	90.931	Phascolarctos_cinereus
ENSECAG00000019114	R3HDM1	88	59.145	ENSPFOG00000015036	r3hdm1	91	58.907	Poecilia_formosa
ENSECAG00000019114	R3HDM1	89	45.892	ENSPLAG00000018042	r3hdm1	99	46.471	Poecilia_latipinna
ENSECAG00000019114	R3HDM1	89	46.125	ENSPMEG00000023947	r3hdm1	99	46.915	Poecilia_mexicana
ENSECAG00000019114	R3HDM1	88	59.716	ENSPREG00000007902	r3hdm1	88	68.285	Poecilia_reticulata
ENSECAG00000019114	R3HDM1	100	94.288	ENSPPYG00000012815	R3HDM1	100	93.563	Pongo_abelii
ENSECAG00000019114	R3HDM1	98	93.313	ENSPCAG00000006208	R3HDM1	93	92.767	Procavia_capensis
ENSECAG00000019114	R3HDM1	100	92.572	ENSPCOG00000012698	R3HDM1	100	93.801	Propithecus_coquereli
ENSECAG00000019114	R3HDM1	100	91.872	ENSPVAG00000006098	R3HDM1	100	87.319	Pteropus_vampyrus
ENSECAG00000019114	R3HDM1	83	76.282	ENSPNAG00000005436	R3HDM1	99	77.133	Pygocentrus_nattereri
ENSECAG00000019114	R3HDM1	88	73.333	ENSPNAG00000013952	r3hdm1	92	73.256	Pygocentrus_nattereri
ENSECAG00000019114	R3HDM1	53	58.400	ENSPNAG00000004162	arpp21	57	58.400	Pygocentrus_nattereri
ENSECAG00000019114	R3HDM1	100	94.089	ENSRNOG00000004099	R3hdm1	100	90.212	Rattus_norvegicus
ENSECAG00000019114	R3HDM1	100	93.569	ENSRBIG00000033317	R3HDM1	100	98.893	Rhinopithecus_bieti
ENSECAG00000019114	R3HDM1	100	94.832	ENSRROG00000034534	R3HDM1	99	97.790	Rhinopithecus_roxellana
ENSECAG00000019114	R3HDM1	100	95.195	ENSSBOG00000020389	R3HDM1	99	96.685	Saimiri_boliviensis_boliviensis
ENSECAG00000019114	R3HDM1	100	86.310	ENSSHAG00000016999	R3HDM1	100	86.310	Sarcophilus_harrisii
ENSECAG00000019114	R3HDM1	100	56.800	ENSSFOG00015019851	-	96	63.419	Scleropages_formosus
ENSECAG00000019114	R3HDM1	100	70.874	ENSSFOG00015014134	r3hdm1	100	70.874	Scleropages_formosus
ENSECAG00000019114	R3HDM1	99	44.949	ENSSMAG00000001669	r3hdm1	99	44.664	Scophthalmus_maximus
ENSECAG00000019114	R3HDM1	88	60.143	ENSSDUG00000010749	r3hdm1	85	68.910	Seriola_dumerili
ENSECAG00000019114	R3HDM1	99	61.575	ENSSLDG00000004499	r3hdm1	91	61.098	Seriola_lalandi_dorsalis
ENSECAG00000019114	R3HDM1	73	83.721	ENSSARG00000000352	-	69	83.721	Sorex_araneus
ENSECAG00000019114	R3HDM1	100	81.176	ENSSPUG00000004167	R3HDM1	100	80.995	Sphenodon_punctatus
ENSECAG00000019114	R3HDM1	89	49.429	ENSSPAG00000004648	r3hdm1	91	61.814	Stegastes_partitus
ENSECAG00000019114	R3HDM1	100	98.522	ENSSSCG00000015692	R3HDM1	100	97.003	Sus_scrofa
ENSECAG00000019114	R3HDM1	100	73.803	ENSTGUG00000011750	R3HDM1	100	73.893	Taeniopygia_guttata
ENSECAG00000019114	R3HDM1	78	67.097	ENSTRUG00000011654	r3hdm1	84	67.097	Takifugu_rubripes
ENSECAG00000019114	R3HDM1	86	46.123	ENSTNIG00000010362	r3hdm1	99	44.838	Tetraodon_nigroviridis
ENSECAG00000019114	R3HDM1	100	89.545	ENSTTRG00000003935	R3HDM1	100	89.545	Tursiops_truncatus
ENSECAG00000019114	R3HDM1	70	97.935	ENSUAMG00000024806	R3HDM1	99	96.494	Ursus_americanus
ENSECAG00000019114	R3HDM1	100	93.000	ENSUMAG00000005552	R3HDM1	99	99.448	Ursus_maritimus
ENSECAG00000019114	R3HDM1	97	100.000	ENSVPAG00000007333	R3HDM1	93	100.000	Vicugna_pacos
ENSECAG00000019114	R3HDM1	100	99.015	ENSVVUG00000006457	R3HDM1	100	97.621	Vulpes_vulpes
ENSECAG00000019114	R3HDM1	89	67.742	ENSXETG00000019330	r3hdm1	100	67.540	Xenopus_tropicalis
ENSECAG00000019114	R3HDM1	70	47.683	ENSXCOG00000017448	r3hdm1	94	49.679	Xiphophorus_couchianus
ENSECAG00000019114	R3HDM1	88	60.621	ENSXMAG00000007885	r3hdm1	91	60.621	Xiphophorus_maculatus