EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000019325 (Gene tree)
Gene ID: 100057912
Gene Symbol: CNOT6
Alias: -
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 41717 bases
Position: chr14:1297375-1339091
Accession: 16678
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000017032	Exo_endo_phos	PF03372.23	1.4e-21	1	1
ENSECAP00000029819	Exo_endo_phos	PF03372.23	1.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000020737	-	1674	-	ENSECAP00000017032	557 (aa)	XP_005599219	F7E2X9
ENSECAT00000059835	-	1431	-	ENSECAP00000029819	476 (aa)	-	-

Gene Model

Click here to download ENSECAG00000019325's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000019325's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000019325	CNOT6	100	92.998	ENSECAG00000012704	-	99	92.998
ENSECAG00000019325	CNOT6	93	78.462	ENSECAG00000001582	CNOT6L	87	79.877

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000019325	CNOT6	100	97.846	ENSG00000113300	CNOT6	100	100.000	Homo_sapiens
ENSECAG00000019325	CNOT6	100	87.478	ENSAPOG00000009994	cnot6b	100	87.478	Acanthochromis_polyacanthus
ENSECAG00000019325	CNOT6	100	98.748	ENSAMEG00000000949	CNOT6	99	98.748	Ailuropoda_melanoleuca
ENSECAG00000019325	CNOT6	100	86.404	ENSACIG00000016566	cnot6b	100	86.404	Amphilophus_citrinellus
ENSECAG00000019325	CNOT6	100	87.478	ENSAOCG00000006893	cnot6b	100	87.478	Amphiprion_ocellaris
ENSECAG00000019325	CNOT6	100	87.478	ENSAPEG00000016949	cnot6b	100	87.478	Amphiprion_percula
ENSECAG00000019325	CNOT6	100	85.510	ENSATEG00000007862	cnot6b	100	85.510	Anabas_testudineus
ENSECAG00000019325	CNOT6	100	96.230	ENSAPLG00000012715	CNOT6	99	96.230	Anas_platyrhynchos
ENSECAG00000019325	CNOT6	100	94.255	ENSACAG00000016548	CNOT6	100	94.255	Anolis_carolinensis
ENSECAG00000019325	CNOT6	100	98.205	ENSANAG00000030436	CNOT6	96	98.205	Aotus_nancymaae
ENSECAG00000019325	CNOT6	100	85.510	ENSACLG00000008279	cnot6b	100	86.404	Astatotilapia_calliptera
ENSECAG00000019325	CNOT6	100	85.663	ENSAMXG00000034694	cnot6b	100	85.663	Astyanax_mexicanus
ENSECAG00000019325	CNOT6	100	87.097	ENSAMXG00000019140	cnot6a	100	87.097	Astyanax_mexicanus
ENSECAG00000019325	CNOT6	100	98.743	ENSBTAG00000017362	CNOT6	100	98.743	Bos_taurus
ENSECAG00000019325	CNOT6	100	98.025	ENSCJAG00000009795	CNOT6	100	98.025	Callithrix_jacchus
ENSECAG00000019325	CNOT6	100	99.102	ENSCAFG00000000464	CNOT6	100	99.102	Canis_familiaris
ENSECAG00000019325	CNOT6	100	99.102	ENSCAFG00020002441	CNOT6	100	99.102	Canis_lupus_dingo
ENSECAG00000019325	CNOT6	100	98.384	ENSCHIG00000019100	CNOT6	100	98.384	Capra_hircus
ENSECAG00000019325	CNOT6	100	96.230	ENSTSYG00000003982	CNOT6	100	96.230	Carlito_syrichta
ENSECAG00000019325	CNOT6	100	92.998	ENSCPOG00000035657	CNOT6	100	92.998	Cavia_porcellus
ENSECAG00000019325	CNOT6	100	93.537	ENSCCAG00000033670	CNOT6	100	93.537	Cebus_capucinus
ENSECAG00000019325	CNOT6	100	97.846	ENSCATG00000042014	CNOT6	100	97.846	Cercocebus_atys
ENSECAG00000019325	CNOT6	100	96.409	ENSCLAG00000010489	CNOT6	100	96.409	Chinchilla_lanigera
ENSECAG00000019325	CNOT6	100	97.846	ENSCSAG00000008165	CNOT6	100	97.846	Chlorocebus_sabaeus
ENSECAG00000019325	CNOT6	100	96.948	ENSCHOG00000009680	CNOT6	100	96.948	Choloepus_hoffmanni
ENSECAG00000019325	CNOT6	100	95.512	ENSCPBG00000008908	CNOT6	100	95.512	Chrysemys_picta_bellii
ENSECAG00000019325	CNOT6	100	97.666	ENSCANG00000026756	CNOT6	100	97.666	Colobus_angolensis_palliatus
ENSECAG00000019325	CNOT6	100	95.691	ENSCGRG00001011452	Cnot6	100	95.691	Cricetulus_griseus_chok1gshd
ENSECAG00000019325	CNOT6	100	94.075	ENSCGRG00000010407	Cnot6	100	94.075	Cricetulus_griseus_crigri
ENSECAG00000019325	CNOT6	100	86.583	ENSCSEG00000010939	cnot6b	100	86.583	Cynoglossus_semilaevis
ENSECAG00000019325	CNOT6	100	86.201	ENSCVAG00000010538	cnot6b	100	86.201	Cyprinodon_variegatus
ENSECAG00000019325	CNOT6	100	86.559	ENSDARG00000008255	cnot6a	100	86.559	Danio_rerio
ENSECAG00000019325	CNOT6	100	84.409	ENSDARG00000101072	cnot6b	100	84.409	Danio_rerio
ENSECAG00000019325	CNOT6	100	97.487	ENSDNOG00000041644	CNOT6	100	97.487	Dasypus_novemcinctus
ENSECAG00000019325	CNOT6	100	86.715	ENSDORG00000001708	Cnot6	100	86.715	Dipodomys_ordii
ENSECAG00000019325	CNOT6	100	77.818	ENSETEG00000006975	CNOT6	100	77.818	Echinops_telfairi
ENSECAG00000019325	CNOT6	90	93.400	ENSEASG00005012957	-	99	93.400	Equus_asinus_asinus
ENSECAG00000019325	CNOT6	100	99.282	ENSEASG00005012794	-	100	99.282	Equus_asinus_asinus
ENSECAG00000019325	CNOT6	100	97.307	ENSEEUG00000015382	CNOT6	100	97.307	Erinaceus_europaeus
ENSECAG00000019325	CNOT6	100	83.598	ENSELUG00000015981	cnot6b	99	83.598	Esox_lucius
ENSECAG00000019325	CNOT6	100	82.437	ENSELUG00000024580	cnot6a	100	82.437	Esox_lucius
ENSECAG00000019325	CNOT6	100	99.102	ENSFCAG00000001881	CNOT6	100	99.102	Felis_catus
ENSECAG00000019325	CNOT6	100	96.409	ENSFALG00000007699	CNOT6	100	96.409	Ficedula_albicollis
ENSECAG00000019325	CNOT6	100	96.230	ENSFDAG00000001999	CNOT6	100	96.230	Fukomys_damarensis
ENSECAG00000019325	CNOT6	65	88.095	ENSFHEG00000013756	cnot6b	94	92.308	Fundulus_heteroclitus
ENSECAG00000019325	CNOT6	95	85.633	ENSGMOG00000009767	cnot6b	99	85.633	Gadus_morhua
ENSECAG00000019325	CNOT6	100	96.409	ENSGALG00000034316	CNOT6	100	96.409	Gallus_gallus
ENSECAG00000019325	CNOT6	100	86.380	ENSGAFG00000008525	cnot6b	100	86.380	Gambusia_affinis
ENSECAG00000019325	CNOT6	95	83.743	ENSGACG00000018046	cnot6b	99	83.743	Gasterosteus_aculeatus
ENSECAG00000019325	CNOT6	100	79.892	ENSGAGG00000012176	CNOT6	100	79.892	Gopherus_agassizii
ENSECAG00000019325	CNOT6	100	97.846	ENSGGOG00000003675	CNOT6	100	97.846	Gorilla_gorilla
ENSECAG00000019325	CNOT6	100	85.689	ENSHBUG00000002819	cnot6b	100	86.583	Haplochromis_burtoni
ENSECAG00000019325	CNOT6	100	96.589	ENSHGLG00000017756	CNOT6	100	96.589	Heterocephalus_glaber_female
ENSECAG00000019325	CNOT6	100	96.589	ENSHGLG00100005747	CNOT6	100	96.589	Heterocephalus_glaber_male
ENSECAG00000019325	CNOT6	100	84.079	ENSHCOG00000016176	cnot6b	100	84.973	Hippocampus_comes
ENSECAG00000019325	CNOT6	100	85.305	ENSIPUG00000017482	cnot6b	100	85.305	Ictalurus_punctatus
ENSECAG00000019325	CNOT6	100	86.022	ENSIPUG00000019831	cnot6a	100	86.022	Ictalurus_punctatus
ENSECAG00000019325	CNOT6	100	97.487	ENSSTOG00000002803	CNOT6	100	97.487	Ictidomys_tridecemlineatus
ENSECAG00000019325	CNOT6	100	96.050	ENSJJAG00000012296	Cnot6	100	96.050	Jaculus_jaculus
ENSECAG00000019325	CNOT6	100	87.276	ENSKMAG00000004640	cnot6b	100	87.276	Kryptolebias_marmoratus
ENSECAG00000019325	CNOT6	100	84.615	ENSLBEG00000027917	cnot6b	100	85.510	Labrus_bergylta
ENSECAG00000019325	CNOT6	100	90.502	ENSLOCG00000010102	cnot6b	99	90.502	Lepisosteus_oculatus
ENSECAG00000019325	CNOT6	100	98.205	ENSLAFG00000016742	CNOT6	100	98.205	Loxodonta_africana
ENSECAG00000019325	CNOT6	100	97.846	ENSMFAG00000030867	CNOT6	100	97.846	Macaca_fascicularis
ENSECAG00000019325	CNOT6	100	97.846	ENSMMUG00000018690	CNOT6	100	97.846	Macaca_mulatta
ENSECAG00000019325	CNOT6	100	97.846	ENSMNEG00000038565	CNOT6	100	97.846	Macaca_nemestrina
ENSECAG00000019325	CNOT6	100	97.846	ENSMLEG00000010555	CNOT6	100	97.846	Mandrillus_leucophaeus
ENSECAG00000019325	CNOT6	100	87.657	ENSMAMG00000007515	cnot6b	100	87.657	Mastacembelus_armatus
ENSECAG00000019325	CNOT6	100	85.510	ENSMZEG00005012899	cnot6b	100	86.404	Maylandia_zebra
ENSECAG00000019325	CNOT6	100	96.768	ENSMAUG00000019798	Cnot6	100	96.768	Mesocricetus_auratus
ENSECAG00000019325	CNOT6	100	96.050	ENSMICG00000013018	-	100	96.050	Microcebus_murinus
ENSECAG00000019325	CNOT6	98	87.500	ENSMICG00000028378	-	99	87.500	Microcebus_murinus
ENSECAG00000019325	CNOT6	100	96.768	ENSMOCG00000021662	Cnot6	100	96.768	Microtus_ochrogaster
ENSECAG00000019325	CNOT6	100	84.767	ENSMMOG00000003227	cnot6b	100	84.767	Mola_mola
ENSECAG00000019325	CNOT6	100	96.409	ENSMODG00000003979	CNOT6	100	96.409	Monodelphis_domestica
ENSECAG00000019325	CNOT6	100	87.299	ENSMALG00000014251	cnot6b	100	87.299	Monopterus_albus
ENSECAG00000019325	CNOT6	100	96.948	MGP_CAROLIEiJ_G0016277	Cnot6	100	96.948	Mus_caroli
ENSECAG00000019325	CNOT6	100	96.948	ENSMUSG00000020362	Cnot6	100	96.948	Mus_musculus
ENSECAG00000019325	CNOT6	100	96.948	MGP_PahariEiJ_G0017413	Cnot6	100	96.948	Mus_pahari
ENSECAG00000019325	CNOT6	100	96.948	MGP_SPRETEiJ_G0017122	Cnot6	100	96.948	Mus_spretus
ENSECAG00000019325	CNOT6	100	98.923	ENSMPUG00000000587	CNOT6	96	98.923	Mustela_putorius_furo
ENSECAG00000019325	CNOT6	100	96.263	ENSMLUG00000010257	CNOT6	100	96.263	Myotis_lucifugus
ENSECAG00000019325	CNOT6	100	96.050	ENSNGAG00000008269	Cnot6	100	96.050	Nannospalax_galili
ENSECAG00000019325	CNOT6	100	85.689	ENSNBRG00000010798	cnot6b	100	86.583	Neolamprologus_brichardi
ENSECAG00000019325	CNOT6	100	96.409	ENSNLEG00000002322	CNOT6	100	96.409	Nomascus_leucogenys
ENSECAG00000019325	CNOT6	81	96.262	ENSMEUG00000000025	CNOT6	81	96.262	Notamacropus_eugenii
ENSECAG00000019325	CNOT6	88	96.420	ENSOPRG00000008244	-	88	96.420	Ochotona_princeps
ENSECAG00000019325	CNOT6	100	95.871	ENSODEG00000007041	CNOT6	100	95.871	Octodon_degus
ENSECAG00000019325	CNOT6	75	85.816	ENSONIG00000013027	cnot6b	99	85.816	Oreochromis_niloticus
ENSECAG00000019325	CNOT6	100	95.512	ENSOANG00000010226	CNOT6	100	95.512	Ornithorhynchus_anatinus
ENSECAG00000019325	CNOT6	100	96.780	ENSOCUG00000011083	CNOT6	100	96.780	Oryctolagus_cuniculus
ENSECAG00000019325	CNOT6	100	86.047	ENSORLG00000005059	cnot6b	100	86.047	Oryzias_latipes
ENSECAG00000019325	CNOT6	100	86.047	ENSORLG00020012784	cnot6b	100	86.047	Oryzias_latipes_hni
ENSECAG00000019325	CNOT6	94	85.277	ENSORLG00015022658	cnot6b	98	85.277	Oryzias_latipes_hsok
ENSECAG00000019325	CNOT6	100	86.225	ENSOMEG00000005295	cnot6b	100	86.225	Oryzias_melastigma
ENSECAG00000019325	CNOT6	94	97.328	ENSOGAG00000032470	CNOT6	100	97.328	Otolemur_garnettii
ENSECAG00000019325	CNOT6	97	98.155	ENSOARG00000001003	CNOT6	100	98.155	Ovis_aries
ENSECAG00000019325	CNOT6	100	97.846	ENSPPAG00000032253	CNOT6	100	97.846	Pan_paniscus
ENSECAG00000019325	CNOT6	100	98.923	ENSPPRG00000011912	CNOT6	100	98.923	Panthera_pardus
ENSECAG00000019325	CNOT6	100	98.923	ENSPTIG00000016794	CNOT6	100	98.923	Panthera_tigris_altaica
ENSECAG00000019325	CNOT6	100	97.846	ENSPTRG00000017636	CNOT6	100	97.846	Pan_troglodytes
ENSECAG00000019325	CNOT6	100	97.846	ENSPANG00000016191	CNOT6	100	97.846	Papio_anubis
ENSECAG00000019325	CNOT6	100	87.097	ENSPKIG00000021368	cnot6b	100	87.097	Paramormyrops_kingsleyae
ENSECAG00000019325	CNOT6	98	95.956	ENSPSIG00000017307	CNOT6	100	95.956	Pelodiscus_sinensis
ENSECAG00000019325	CNOT6	100	86.225	ENSPMGG00000011238	cnot6b	100	86.225	Periophthalmus_magnuspinnatus
ENSECAG00000019325	CNOT6	100	95.691	ENSPEMG00000000627	Cnot6	100	95.691	Peromyscus_maniculatus_bairdii
ENSECAG00000019325	CNOT6	100	96.230	ENSPCIG00000020319	CNOT6	99	96.230	Phascolarctos_cinereus
ENSECAG00000019325	CNOT6	100	86.201	ENSPFOG00000006291	cnot6b	100	86.201	Poecilia_formosa
ENSECAG00000019325	CNOT6	100	82.616	ENSPLAG00000008266	cnot6b	100	82.616	Poecilia_latipinna
ENSECAG00000019325	CNOT6	100	86.380	ENSPMEG00000009091	cnot6b	100	86.380	Poecilia_mexicana
ENSECAG00000019325	CNOT6	100	85.125	ENSPREG00000003713	cnot6b	100	85.125	Poecilia_reticulata
ENSECAG00000019325	CNOT6	100	97.846	ENSPPYG00000016137	CNOT6	100	97.846	Pongo_abelii
ENSECAG00000019325	CNOT6	71	96.617	ENSPCAG00000005599	-	71	96.617	Procavia_capensis
ENSECAG00000019325	CNOT6	100	91.921	ENSPCOG00000017359	CNOT6	100	92.639	Propithecus_coquereli
ENSECAG00000019325	CNOT6	100	93.537	ENSPVAG00000003069	CNOT6	100	93.537	Pteropus_vampyrus
ENSECAG00000019325	CNOT6	100	85.331	ENSPNYG00000000321	cnot6b	100	86.225	Pundamilia_nyererei
ENSECAG00000019325	CNOT6	100	87.276	ENSPNAG00000029586	cnot6a	100	87.276	Pygocentrus_nattereri
ENSECAG00000019325	CNOT6	100	85.842	ENSPNAG00000028816	cnot6b	100	85.842	Pygocentrus_nattereri
ENSECAG00000019325	CNOT6	100	95.871	ENSRNOG00000054891	Cnot6	100	95.871	Rattus_norvegicus
ENSECAG00000019325	CNOT6	100	97.666	ENSRBIG00000004309	CNOT6	100	97.666	Rhinopithecus_bieti
ENSECAG00000019325	CNOT6	100	97.666	ENSRROG00000035378	CNOT6	100	97.666	Rhinopithecus_roxellana
ENSECAG00000019325	CNOT6	100	98.025	ENSSBOG00000030494	CNOT6	100	98.025	Saimiri_boliviensis_boliviensis
ENSECAG00000019325	CNOT6	100	96.230	ENSSHAG00000017436	CNOT6	100	96.230	Sarcophilus_harrisii
ENSECAG00000019325	CNOT6	100	86.559	ENSSFOG00015022383	cnot6a	96	86.559	Scleropages_formosus
ENSECAG00000019325	CNOT6	100	88.710	ENSSFOG00015015133	CNOT6	100	88.710	Scleropages_formosus
ENSECAG00000019325	CNOT6	100	85.331	ENSSMAG00000003084	cnot6b	100	85.331	Scophthalmus_maximus
ENSECAG00000019325	CNOT6	100	87.120	ENSSDUG00000004151	cnot6b	100	87.120	Seriola_dumerili
ENSECAG00000019325	CNOT6	100	86.404	ENSSLDG00000004448	cnot6b	100	87.299	Seriola_lalandi_dorsalis
ENSECAG00000019325	CNOT6	75	77.374	ENSSARG00000012650	-	100	77.374	Sorex_araneus
ENSECAG00000019325	CNOT6	100	95.153	ENSSPUG00000007893	CNOT6	100	95.153	Sphenodon_punctatus
ENSECAG00000019325	CNOT6	100	87.299	ENSSPAG00000000149	cnot6b	100	87.299	Stegastes_partitus
ENSECAG00000019325	CNOT6	100	98.564	ENSSSCG00000014009	CNOT6	100	98.701	Sus_scrofa
ENSECAG00000019325	CNOT6	100	96.050	ENSTGUG00000001119	CNOT6	100	96.050	Taeniopygia_guttata
ENSECAG00000019325	CNOT6	100	84.740	ENSTRUG00000002818	cnot6b	100	84.740	Takifugu_rubripes
ENSECAG00000019325	CNOT6	100	85.278	ENSTNIG00000004443	cnot6b	99	85.278	Tetraodon_nigroviridis
ENSECAG00000019325	CNOT6	87	67.967	ENSTBEG00000017094	-	100	67.967	Tupaia_belangeri
ENSECAG00000019325	CNOT6	100	98.743	ENSTTRG00000009363	CNOT6	100	98.743	Tursiops_truncatus
ENSECAG00000019325	CNOT6	88	93.556	ENSUAMG00000004579	CNOT6	88	98.834	Ursus_americanus
ENSECAG00000019325	CNOT6	100	94.349	ENSUMAG00000024577	CNOT6	100	94.349	Ursus_maritimus
ENSECAG00000019325	CNOT6	83	97.430	ENSVPAG00000003593	CNOT6	83	97.430	Vicugna_pacos
ENSECAG00000019325	CNOT6	100	99.102	ENSVVUG00000026940	CNOT6	100	99.102	Vulpes_vulpes
ENSECAG00000019325	CNOT6	100	82.975	ENSXCOG00000003360	cnot6b	100	82.975	Xiphophorus_couchianus
ENSECAG00000019325	CNOT6	100	86.380	ENSXMAG00000008730	cnot6b	100	86.380	Xiphophorus_maculatus