EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000019493 (Gene tree)
Gene ID: 100062840
Gene Symbol: USB1
Alias: -
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 15282 bases
Position: chr3:10804065-10819346
Accession: 24823
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000017029	HVSL	PF09749.9	2.2e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000020732	-	873	-	ENSECAP00000017029	290 (aa)	-	F7E331

Gene Model

Click here to download ENSECAG00000019493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000019493's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000019493	USB1	91	86.038	ENSG00000103005	USB1	100	88.785	Homo_sapiens
ENSECAG00000019493	USB1	89	47.482	ENSAPOG00000011942	usb1	99	47.122	Acanthochromis_polyacanthus
ENSECAG00000019493	USB1	91	86.617	ENSAMEG00000017205	USB1	100	86.617	Ailuropoda_melanoleuca
ENSECAG00000019493	USB1	78	53.778	ENSACIG00000012234	usb1	99	50.183	Amphilophus_citrinellus
ENSECAG00000019493	USB1	78	53.540	ENSAOCG00000014831	usb1	99	48.571	Amphiprion_ocellaris
ENSECAG00000019493	USB1	78	53.982	ENSAPEG00000000296	usb1	99	48.929	Amphiprion_percula
ENSECAG00000019493	USB1	80	52.381	ENSATEG00000009348	usb1	99	48.571	Anabas_testudineus
ENSECAG00000019493	USB1	77	71.556	ENSAPLG00000002756	USB1	99	71.556	Anas_platyrhynchos
ENSECAG00000019493	USB1	78	64.474	ENSACAG00000015481	USB1	99	64.474	Anolis_carolinensis
ENSECAG00000019493	USB1	91	85.283	ENSANAG00000035640	USB1	100	85.283	Aotus_nancymaae
ENSECAG00000019493	USB1	77	53.363	ENSACLG00000020586	usb1	99	47.670	Astatotilapia_calliptera
ENSECAG00000019493	USB1	78	52.000	ENSAMXG00000040146	usb1	75	52.000	Astyanax_mexicanus
ENSECAG00000019493	USB1	91	87.547	ENSBTAG00000015758	USB1	100	87.547	Bos_taurus
ENSECAG00000019493	USB1	91	87.547	ENSCJAG00000011733	USB1	100	87.547	Callithrix_jacchus
ENSECAG00000019493	USB1	91	82.721	ENSCAFG00000008556	USB1	73	83.456	Canis_familiaris
ENSECAG00000019493	USB1	91	82.836	ENSCAFG00020009263	USB1	99	82.836	Canis_lupus_dingo
ENSECAG00000019493	USB1	91	86.792	ENSCHIG00000024290	USB1	100	86.792	Capra_hircus
ENSECAG00000019493	USB1	91	86.415	ENSTSYG00000006997	USB1	100	86.415	Carlito_syrichta
ENSECAG00000019493	USB1	80	71.552	ENSCAPG00000009057	USB1	100	71.552	Cavia_aperea
ENSECAG00000019493	USB1	91	83.209	ENSCPOG00000014325	USB1	100	83.209	Cavia_porcellus
ENSECAG00000019493	USB1	91	86.038	ENSCCAG00000022132	USB1	100	86.038	Cebus_capucinus
ENSECAG00000019493	USB1	91	87.547	ENSCATG00000032174	USB1	100	87.547	Cercocebus_atys
ENSECAG00000019493	USB1	61	88.636	ENSCLAG00000007363	USB1	100	88.636	Chinchilla_lanigera
ENSECAG00000019493	USB1	91	87.925	ENSCSAG00000004783	USB1	100	87.925	Chlorocebus_sabaeus
ENSECAG00000019493	USB1	91	62.455	ENSCPBG00000026943	USB1	99	64.388	Chrysemys_picta_bellii
ENSECAG00000019493	USB1	79	31.224	ENSCSAVG00000000894	-	85	31.224	Ciona_savignyi
ENSECAG00000019493	USB1	91	86.415	ENSCANG00000037135	USB1	100	86.415	Colobus_angolensis_palliatus
ENSECAG00000019493	USB1	91	82.836	ENSCGRG00001011243	USB1	100	82.836	Cricetulus_griseus_chok1gshd
ENSECAG00000019493	USB1	91	82.836	ENSCGRG00000013252	USB1	100	82.836	Cricetulus_griseus_crigri
ENSECAG00000019493	USB1	89	47.810	ENSCSEG00000013881	usb1	99	47.810	Cynoglossus_semilaevis
ENSECAG00000019493	USB1	77	49.561	ENSCVAG00000009252	usb1	97	50.000	Cyprinodon_variegatus
ENSECAG00000019493	USB1	86	48.387	ENSDARG00000003841	usb1	99	46.715	Danio_rerio
ENSECAG00000019493	USB1	91	82.264	ENSDORG00000001888	Usb1	100	82.264	Dipodomys_ordii
ENSECAG00000019493	USB1	89	36.940	FBgn0037713	CG16790	97	36.940	Drosophila_melanogaster
ENSECAG00000019493	USB1	91	71.536	ENSETEG00000019682	USB1	100	71.536	Echinops_telfairi
ENSECAG00000019493	USB1	77	52.915	ENSEBUG00000005889	usb1	78	52.915	Eptatretus_burgeri
ENSECAG00000019493	USB1	91	98.491	ENSEASG00005005484	USB1	100	98.491	Equus_asinus_asinus
ENSECAG00000019493	USB1	61	80.114	ENSEEUG00000000154	USB1	100	62.264	Erinaceus_europaeus
ENSECAG00000019493	USB1	78	49.339	ENSELUG00000010974	usb1	99	46.350	Esox_lucius
ENSECAG00000019493	USB1	91	88.015	ENSFCAG00000002693	USB1	100	88.015	Felis_catus
ENSECAG00000019493	USB1	77	67.265	ENSFALG00000006876	USB1	99	62.782	Ficedula_albicollis
ENSECAG00000019493	USB1	91	85.768	ENSFDAG00000010052	USB1	100	85.768	Fukomys_damarensis
ENSECAG00000019493	USB1	79	48.361	ENSFHEG00000012334	usb1	97	48.770	Fundulus_heteroclitus
ENSECAG00000019493	USB1	77	52.018	ENSGMOG00000004228	usb1	99	52.018	Gadus_morhua
ENSECAG00000019493	USB1	77	69.507	ENSGALG00000035604	USB1	100	66.541	Gallus_gallus
ENSECAG00000019493	USB1	90	47.273	ENSGAFG00000021890	usb1	99	47.273	Gambusia_affinis
ENSECAG00000019493	USB1	77	52.018	ENSGACG00000003257	usb1	99	48.364	Gasterosteus_aculeatus
ENSECAG00000019493	USB1	91	64.835	ENSGAGG00000022572	USB1	99	64.835	Gopherus_agassizii
ENSECAG00000019493	USB1	91	86.792	ENSGGOG00000017147	USB1	100	86.792	Gorilla_gorilla
ENSECAG00000019493	USB1	78	53.540	ENSHBUG00000009823	usb1	99	48.561	Haplochromis_burtoni
ENSECAG00000019493	USB1	93	86.813	ENSHGLG00000016078	USB1	100	86.813	Heterocephalus_glaber_female
ENSECAG00000019493	USB1	93	86.813	ENSHGLG00100005562	USB1	100	86.813	Heterocephalus_glaber_male
ENSECAG00000019493	USB1	75	53.917	ENSHCOG00000015633	usb1	99	51.538	Hippocampus_comes
ENSECAG00000019493	USB1	77	54.709	ENSIPUG00000008601	usb1	77	54.709	Ictalurus_punctatus
ENSECAG00000019493	USB1	91	83.883	ENSSTOG00000007548	USB1	100	84.249	Ictidomys_tridecemlineatus
ENSECAG00000019493	USB1	91	86.517	ENSJJAG00000021859	Usb1	100	86.517	Jaculus_jaculus
ENSECAG00000019493	USB1	78	52.212	ENSKMAG00000007200	usb1	99	47.687	Kryptolebias_marmoratus
ENSECAG00000019493	USB1	79	48.246	ENSLBEG00000008452	usb1	71	48.246	Labrus_bergylta
ENSECAG00000019493	USB1	71	62.500	ENSLACG00000000105	USB1	91	55.849	Latimeria_chalumnae
ENSECAG00000019493	USB1	81	55.602	ENSLOCG00000000465	usb1	99	51.590	Lepisosteus_oculatus
ENSECAG00000019493	USB1	91	66.296	ENSLAFG00000002267	USB1	100	66.667	Loxodonta_africana
ENSECAG00000019493	USB1	91	87.925	ENSMFAG00000003926	USB1	100	87.925	Macaca_fascicularis
ENSECAG00000019493	USB1	91	87.925	ENSMMUG00000022669	USB1	100	87.925	Macaca_mulatta
ENSECAG00000019493	USB1	91	87.547	ENSMNEG00000042487	USB1	100	87.547	Macaca_nemestrina
ENSECAG00000019493	USB1	91	87.925	ENSMLEG00000028756	USB1	100	87.925	Mandrillus_leucophaeus
ENSECAG00000019493	USB1	89	49.097	ENSMAMG00000015092	usb1	99	49.097	Mastacembelus_armatus
ENSECAG00000019493	USB1	77	53.363	ENSMZEG00005010008	usb1	99	48.201	Maylandia_zebra
ENSECAG00000019493	USB1	91	82.772	ENSMAUG00000007832	Usb1	100	82.772	Mesocricetus_auratus
ENSECAG00000019493	USB1	91	87.170	ENSMICG00000004900	USB1	100	87.170	Microcebus_murinus
ENSECAG00000019493	USB1	91	82.397	ENSMOCG00000022647	Usb1	100	82.397	Microtus_ochrogaster
ENSECAG00000019493	USB1	79	52.193	ENSMMOG00000000490	usb1	99	50.192	Mola_mola
ENSECAG00000019493	USB1	91	66.296	ENSMODG00000014067	USB1	100	67.910	Monodelphis_domestica
ENSECAG00000019493	USB1	86	50.800	ENSMALG00000005930	usb1	99	49.286	Monopterus_albus
ENSECAG00000019493	USB1	91	82.397	MGP_CAROLIEiJ_G0031421	Usb1	100	84.071	Mus_caroli
ENSECAG00000019493	USB1	91	82.397	ENSMUSG00000031792	Usb1	100	84.956	Mus_musculus
ENSECAG00000019493	USB1	91	82.772	MGP_PahariEiJ_G0023019	Usb1	100	85.470	Mus_pahari
ENSECAG00000019493	USB1	91	81.648	MGP_SPRETEiJ_G0032540	Usb1	100	81.648	Mus_spretus
ENSECAG00000019493	USB1	94	83.696	ENSMPUG00000004684	USB1	99	83.696	Mustela_putorius_furo
ENSECAG00000019493	USB1	80	90.909	ENSMLUG00000007400	USB1	100	90.909	Myotis_lucifugus
ENSECAG00000019493	USB1	91	84.015	ENSNGAG00000009703	Usb1	100	84.387	Nannospalax_galili
ENSECAG00000019493	USB1	80	47.845	ENSNBRG00000008747	usb1	99	52.113	Neolamprologus_brichardi
ENSECAG00000019493	USB1	86	86.800	ENSNLEG00000003340	USB1	100	86.800	Nomascus_leucogenys
ENSECAG00000019493	USB1	51	60.645	ENSMEUG00000003328	-	100	63.462	Notamacropus_eugenii
ENSECAG00000019493	USB1	58	84.848	ENSOPRG00000011803	USB1	72	84.848	Ochotona_princeps
ENSECAG00000019493	USB1	91	83.083	ENSODEG00000016214	USB1	99	83.083	Octodon_degus
ENSECAG00000019493	USB1	89	48.375	ENSONIG00000011063	usb1	99	48.375	Oreochromis_niloticus
ENSECAG00000019493	USB1	77	73.778	ENSOANG00000012118	USB1	94	73.778	Ornithorhynchus_anatinus
ENSECAG00000019493	USB1	77	50.673	ENSORLG00000012479	usb1	99	46.691	Oryzias_latipes
ENSECAG00000019493	USB1	77	50.673	ENSORLG00020018671	usb1	99	45.926	Oryzias_latipes_hni
ENSECAG00000019493	USB1	81	47.541	ENSORLG00015009679	usb1	99	46.296	Oryzias_latipes_hsok
ENSECAG00000019493	USB1	77	51.121	ENSOMEG00000012930	usb1	99	46.545	Oryzias_melastigma
ENSECAG00000019493	USB1	91	80.377	ENSOGAG00000003273	USB1	100	80.377	Otolemur_garnettii
ENSECAG00000019493	USB1	83	88.382	ENSOARG00000001107	USB1	92	88.382	Ovis_aries
ENSECAG00000019493	USB1	91	86.415	ENSPPAG00000042137	USB1	100	86.415	Pan_paniscus
ENSECAG00000019493	USB1	91	87.266	ENSPPRG00000024797	USB1	100	87.266	Panthera_pardus
ENSECAG00000019493	USB1	91	87.266	ENSPTIG00000007506	USB1	100	87.266	Panthera_tigris_altaica
ENSECAG00000019493	USB1	91	79.623	ENSPTRG00000008172	USB1	100	89.720	Pan_troglodytes
ENSECAG00000019493	USB1	91	87.925	ENSPANG00000025138	USB1	100	87.925	Papio_anubis
ENSECAG00000019493	USB1	77	56.054	ENSPKIG00000015109	usb1	99	47.797	Paramormyrops_kingsleyae
ENSECAG00000019493	USB1	77	54.425	ENSPSIG00000004305	USB1	100	54.425	Pelodiscus_sinensis
ENSECAG00000019493	USB1	78	50.000	ENSPMGG00000017725	usb1	98	47.692	Periophthalmus_magnuspinnatus
ENSECAG00000019493	USB1	91	81.618	ENSPEMG00000016183	Usb1	100	81.985	Peromyscus_maniculatus_bairdii
ENSECAG00000019493	USB1	80	52.340	ENSPMAG00000000462	usb1	99	52.340	Petromyzon_marinus
ENSECAG00000019493	USB1	90	47.464	ENSPFOG00000011130	usb1	99	47.464	Poecilia_formosa
ENSECAG00000019493	USB1	90	47.464	ENSPLAG00000009820	usb1	99	47.464	Poecilia_latipinna
ENSECAG00000019493	USB1	90	47.464	ENSPMEG00000006402	usb1	99	47.464	Poecilia_mexicana
ENSECAG00000019493	USB1	79	47.541	ENSPREG00000001047	usb1	98	48.361	Poecilia_reticulata
ENSECAG00000019493	USB1	87	83.333	ENSPPYG00000007401	USB1	100	83.333	Pongo_abelii
ENSECAG00000019493	USB1	91	86.792	ENSPCOG00000022612	USB1	100	86.792	Propithecus_coquereli
ENSECAG00000019493	USB1	91	83.774	ENSPVAG00000004613	USB1	100	83.774	Pteropus_vampyrus
ENSECAG00000019493	USB1	89	48.106	ENSPNYG00000022262	usb1	99	49.281	Pundamilia_nyererei
ENSECAG00000019493	USB1	77	52.915	ENSPNAG00000011736	usb1	99	45.548	Pygocentrus_nattereri
ENSECAG00000019493	USB1	91	82.022	ENSRNOG00000013216	Usb1	100	82.022	Rattus_norvegicus
ENSECAG00000019493	USB1	91	81.132	ENSRBIG00000044466	USB1	100	91.121	Rhinopithecus_bieti
ENSECAG00000019493	USB1	91	87.547	ENSRROG00000029211	USB1	100	87.547	Rhinopithecus_roxellana
ENSECAG00000019493	USB1	91	86.792	ENSSBOG00000029362	USB1	100	86.792	Saimiri_boliviensis_boliviensis
ENSECAG00000019493	USB1	76	73.973	ENSSHAG00000006993	USB1	100	69.565	Sarcophilus_harrisii
ENSECAG00000019493	USB1	80	56.897	ENSSFOG00015023663	usb1	73	56.897	Scleropages_formosus
ENSECAG00000019493	USB1	89	48.375	ENSSMAG00000015834	usb1	99	47.782	Scophthalmus_maximus
ENSECAG00000019493	USB1	78	55.111	ENSSDUG00000002949	usb1	99	50.554	Seriola_dumerili
ENSECAG00000019493	USB1	91	49.049	ENSSLDG00000014174	usb1	99	49.281	Seriola_lalandi_dorsalis
ENSECAG00000019493	USB1	74	67.290	ENSSPUG00000006741	USB1	100	67.290	Sphenodon_punctatus
ENSECAG00000019493	USB1	89	45.745	ENSSPAG00000007484	usb1	99	45.583	Stegastes_partitus
ENSECAG00000019493	USB1	91	86.989	ENSSSCG00000002807	USB1	100	86.989	Sus_scrofa
ENSECAG00000019493	USB1	73	69.194	ENSTGUG00000004792	USB1	99	62.879	Taeniopygia_guttata
ENSECAG00000019493	USB1	90	47.761	ENSTRUG00000021069	usb1	99	47.761	Takifugu_rubripes
ENSECAG00000019493	USB1	90	46.743	ENSTNIG00000000626	usb1	98	46.743	Tetraodon_nigroviridis
ENSECAG00000019493	USB1	80	59.914	ENSTBEG00000001507	USB1	100	59.914	Tupaia_belangeri
ENSECAG00000019493	USB1	53	90.000	ENSTTRG00000008429	-	58	90.000	Tursiops_truncatus
ENSECAG00000019493	USB1	91	86.617	ENSUAMG00000016823	USB1	100	86.617	Ursus_americanus
ENSECAG00000019493	USB1	74	88.318	ENSUMAG00000021369	USB1	100	88.318	Ursus_maritimus
ENSECAG00000019493	USB1	70	62.069	ENSVPAG00000009834	-	100	62.069	Vicugna_pacos
ENSECAG00000019493	USB1	91	83.582	ENSVVUG00000023700	USB1	93	85.062	Vulpes_vulpes
ENSECAG00000019493	USB1	75	55.505	ENSXETG00000013795	usb1	99	53.077	Xenopus_tropicalis
ENSECAG00000019493	USB1	78	51.754	ENSXMAG00000024687	usb1	80	48.980	Xiphophorus_maculatus