EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000019675 (Gene tree)
Gene ID: 100051471
Gene Symbol: SNRNP200
Alias: -
Full Name: Equus caballus small nuclear ribonucleoprotein U5 subunit 200 (SNRNP200)%2C mRNA.
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 27991 bases
Position: chr15:12464949-12492939
Accession: NM_001308369
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000028354	ResIII	PF04851.15	7.8e-26	1	2
ENSECAP00000028354	ResIII	PF04851.15	7.8e-26	2	2
ENSECAP00000037127	ResIII	PF04851.15	8.6e-26	1	2
ENSECAP00000037127	ResIII	PF04851.15	8.6e-26	2	2
ENSECAP00000017686	ResIII	PF04851.15	9.4e-26	1	2
ENSECAP00000017686	ResIII	PF04851.15	9.4e-26	2	2
ENSECAP00000036078	ResIII	PF04851.15	1.2e-16	1	1
ENSECAP00000028354	DEAD	PF00270.29	4.5e-52	1	2
ENSECAP00000028354	DEAD	PF00270.29	4.5e-52	2	2
ENSECAP00000037127	DEAD	PF00270.29	4.9e-52	1	2
ENSECAP00000037127	DEAD	PF00270.29	4.9e-52	2	2
ENSECAP00000017686	DEAD	PF00270.29	5.4e-52	1	2
ENSECAP00000017686	DEAD	PF00270.29	5.4e-52	2	2
ENSECAP00000036078	DEAD	PF00270.29	3.5e-36	1	2
ENSECAP00000036078	DEAD	PF00270.29	3.5e-36	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000051777	-	6255	-	ENSECAP00000036078	2084 (aa)	-	-
ENSECAT00000050815	-	7213	-	ENSECAP00000037127	2070 (aa)	-	-
ENSECAT00000062124	-	7024	-	ENSECAP00000028354	2007 (aa)	-	-
ENSECAT00000021475	-	6827	-	ENSECAP00000017686	2136 (aa)	-	F7E0H9

Gene Model

Click here to download ENSECAG00000019675's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000019675's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000019675	SNRNP200	86	44.258	ENSECAG00000012013	ASCC3	80	44.662
ENSECAG00000019675	SNRNP200	75	31.707	ENSECAG00000024039	HFM1	54	35.049

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000019675	SNRNP200	100	99.860	ENSG00000144028	SNRNP200	100	99.860	Homo_sapiens
ENSECAG00000019675	SNRNP200	99	90.935	ENSAPOG00000010223	snrnp200	99	90.824	Acanthochromis_polyacanthus
ENSECAG00000019675	SNRNP200	100	99.906	ENSAMEG00000008996	SNRNP200	100	99.906	Ailuropoda_melanoleuca
ENSECAG00000019675	SNRNP200	97	90.257	ENSACIG00000001764	snrnp200	98	90.514	Amphilophus_citrinellus
ENSECAG00000019675	SNRNP200	99	90.841	ENSAOCG00000024593	snrnp200	100	90.043	Amphiprion_ocellaris
ENSECAG00000019675	SNRNP200	97	90.096	ENSAPEG00000012554	snrnp200	100	90.096	Amphiprion_percula
ENSECAG00000019675	SNRNP200	99	90.700	ENSATEG00000022522	snrnp200	99	90.590	Anabas_testudineus
ENSECAG00000019675	SNRNP200	99	98.684	ENSAPLG00000004313	SNRNP200	100	97.737	Anas_platyrhynchos
ENSECAG00000019675	SNRNP200	98	98.825	ENSACAG00000000434	SNRNP200	100	98.825	Anolis_carolinensis
ENSECAG00000019675	SNRNP200	99	98.790	ENSANAG00000036625	SNRNP200	100	95.709	Aotus_nancymaae
ENSECAG00000019675	SNRNP200	99	90.559	ENSACLG00000011188	snrnp200	99	90.449	Astatotilapia_calliptera
ENSECAG00000019675	SNRNP200	99	90.653	ENSAMXG00000005684	snrnp200	99	90.543	Astyanax_mexicanus
ENSECAG00000019675	SNRNP200	100	99.345	ENSBTAG00000000848	SNRNP200	100	99.345	Bos_taurus
ENSECAG00000019675	SNRNP200	100	99.813	ENSCJAG00000007514	SNRNP200	100	99.813	Callithrix_jacchus
ENSECAG00000019675	SNRNP200	100	99.113	ENSCAFG00020019979	SNRNP200	100	100.000	Canis_lupus_dingo
ENSECAG00000019675	SNRNP200	100	99.532	ENSCHIG00000020611	SNRNP200	100	99.532	Capra_hircus
ENSECAG00000019675	SNRNP200	100	99.860	ENSTSYG00000010467	SNRNP200	100	99.860	Carlito_syrichta
ENSECAG00000019675	SNRNP200	99	99.483	ENSCAPG00000017234	SNRNP200	99	99.483	Cavia_aperea
ENSECAG00000019675	SNRNP200	100	99.766	ENSCPOG00000006776	SNRNP200	100	99.766	Cavia_porcellus
ENSECAG00000019675	SNRNP200	100	99.813	ENSCCAG00000033962	SNRNP200	100	99.813	Cebus_capucinus
ENSECAG00000019675	SNRNP200	100	99.860	ENSCATG00000015790	SNRNP200	100	99.860	Cercocebus_atys
ENSECAG00000019675	SNRNP200	100	99.625	ENSCLAG00000004116	SNRNP200	100	99.625	Chinchilla_lanigera
ENSECAG00000019675	SNRNP200	100	99.813	ENSCSAG00000017369	SNRNP200	100	99.813	Chlorocebus_sabaeus
ENSECAG00000019675	SNRNP200	76	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSECAG00000019675	SNRNP200	100	97.889	ENSCPBG00000022571	SNRNP200	100	97.889	Chrysemys_picta_bellii
ENSECAG00000019675	SNRNP200	99	76.736	ENSCING00000005082	-	99	76.740	Ciona_intestinalis
ENSECAG00000019675	SNRNP200	99	98.790	ENSCANG00000033932	SNRNP200	100	99.801	Colobus_angolensis_palliatus
ENSECAG00000019675	SNRNP200	100	99.719	ENSCGRG00001022610	Snrnp200	100	99.719	Cricetulus_griseus_chok1gshd
ENSECAG00000019675	SNRNP200	100	99.158	ENSCGRG00000016472	Snrnp200	100	99.158	Cricetulus_griseus_crigri
ENSECAG00000019675	SNRNP200	100	89.934	ENSCSEG00000016399	snrnp200	100	89.934	Cynoglossus_semilaevis
ENSECAG00000019675	SNRNP200	100	87.812	ENSCVAG00000017631	snrnp200	99	87.812	Cyprinodon_variegatus
ENSECAG00000019675	SNRNP200	100	90.403	ENSDARG00000077536	snrnp200	99	90.403	Danio_rerio
ENSECAG00000019675	SNRNP200	99	99.530	ENSDNOG00000011227	SNRNP200	100	98.315	Dasypus_novemcinctus
ENSECAG00000019675	SNRNP200	99	98.961	ENSDORG00000005861	Snrnp200	100	97.101	Dipodomys_ordii
ENSECAG00000019675	SNRNP200	100	74.348	FBgn0263599	l(3)72Ab	99	74.255	Drosophila_melanogaster
ENSECAG00000019675	SNRNP200	95	99.655	ENSETEG00000000162	SNRNP200	74	99.655	Echinops_telfairi
ENSECAG00000019675	SNRNP200	83	81.345	ENSEBUG00000016524	snrnp200	95	82.869	Eptatretus_burgeri
ENSECAG00000019675	SNRNP200	100	98.881	ENSEASG00005001884	SNRNP200	100	98.881	Equus_asinus_asinus
ENSECAG00000019675	SNRNP200	91	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSECAG00000019675	SNRNP200	99	90.888	ENSELUG00000018948	snrnp200	99	90.777	Esox_lucius
ENSECAG00000019675	SNRNP200	100	99.953	ENSFCAG00000010699	SNRNP200	100	99.953	Felis_catus
ENSECAG00000019675	SNRNP200	92	95.573	ENSFALG00000001368	-	95	92.857	Ficedula_albicollis
ENSECAG00000019675	SNRNP200	100	99.579	ENSFDAG00000004683	SNRNP200	100	99.579	Fukomys_damarensis
ENSECAG00000019675	SNRNP200	100	90.019	ENSFHEG00000003786	snrnp200	99	90.019	Fundulus_heteroclitus
ENSECAG00000019675	SNRNP200	100	89.813	ENSGMOG00000004881	snrnp200	99	89.766	Gadus_morhua
ENSECAG00000019675	SNRNP200	100	90.259	ENSGAFG00000010807	snrnp200	99	90.259	Gambusia_affinis
ENSECAG00000019675	SNRNP200	100	90.051	ENSGACG00000011474	snrnp200	99	89.958	Gasterosteus_aculeatus
ENSECAG00000019675	SNRNP200	95	97.750	ENSGAGG00000016069	SNRNP200	99	97.738	Gopherus_agassizii
ENSECAG00000019675	SNRNP200	100	99.860	ENSGGOG00000005174	SNRNP200	100	99.860	Gorilla_gorilla
ENSECAG00000019675	SNRNP200	97	87.780	ENSHBUG00000011322	snrnp200	99	89.375	Haplochromis_burtoni
ENSECAG00000019675	SNRNP200	100	99.672	ENSHGLG00000006654	SNRNP200	100	99.672	Heterocephalus_glaber_female
ENSECAG00000019675	SNRNP200	100	99.672	ENSHGLG00100018594	SNRNP200	100	99.672	Heterocephalus_glaber_male
ENSECAG00000019675	SNRNP200	100	99.813	ENSSTOG00000016351	SNRNP200	100	99.813	Ictidomys_tridecemlineatus
ENSECAG00000019675	SNRNP200	100	99.672	ENSJJAG00000023659	Snrnp200	100	99.672	Jaculus_jaculus
ENSECAG00000019675	SNRNP200	100	89.766	ENSKMAG00000003665	snrnp200	99	89.766	Kryptolebias_marmoratus
ENSECAG00000019675	SNRNP200	100	90.309	ENSLBEG00000021585	snrnp200	99	90.309	Labrus_bergylta
ENSECAG00000019675	SNRNP200	82	94.836	ENSLACG00000000226	SNRNP200	99	94.836	Latimeria_chalumnae
ENSECAG00000019675	SNRNP200	100	92.228	ENSLOCG00000015198	snrnp200	99	92.228	Lepisosteus_oculatus
ENSECAG00000019675	SNRNP200	100	99.625	ENSLAFG00000015626	SNRNP200	100	99.625	Loxodonta_africana
ENSECAG00000019675	SNRNP200	100	99.813	ENSMFAG00000040174	SNRNP200	100	99.813	Macaca_fascicularis
ENSECAG00000019675	SNRNP200	100	99.813	ENSMMUG00000023261	SNRNP200	100	99.813	Macaca_mulatta
ENSECAG00000019675	SNRNP200	100	99.766	ENSMNEG00000032398	SNRNP200	100	99.766	Macaca_nemestrina
ENSECAG00000019675	SNRNP200	100	99.860	ENSMLEG00000019083	SNRNP200	100	99.860	Mandrillus_leucophaeus
ENSECAG00000019675	SNRNP200	100	90.267	ENSMAMG00000007851	snrnp200	99	90.220	Mastacembelus_armatus
ENSECAG00000019675	SNRNP200	97	87.780	ENSMZEG00005010787	snrnp200	99	89.375	Maylandia_zebra
ENSECAG00000019675	SNRNP200	97	97.291	ENSMGAG00000001831	SNRNP200	100	97.291	Meleagris_gallopavo
ENSECAG00000019675	SNRNP200	100	99.766	ENSMAUG00000011825	Snrnp200	100	99.766	Mesocricetus_auratus
ENSECAG00000019675	SNRNP200	100	99.813	ENSMICG00000004710	SNRNP200	100	99.813	Microcebus_murinus
ENSECAG00000019675	SNRNP200	99	99.392	ENSMOCG00000011814	Snrnp200	100	97.191	Microtus_ochrogaster
ENSECAG00000019675	SNRNP200	99	89.542	ENSMMOG00000014167	snrnp200	99	89.542	Mola_mola
ENSECAG00000019675	SNRNP200	100	99.017	ENSMODG00000008475	SNRNP200	100	99.017	Monodelphis_domestica
ENSECAG00000019675	SNRNP200	99	90.841	ENSMALG00000001973	snrnp200	99	90.730	Monopterus_albus
ENSECAG00000019675	SNRNP200	100	99.672	MGP_CAROLIEiJ_G0024250	Snrnp200	100	99.672	Mus_caroli
ENSECAG00000019675	SNRNP200	100	99.719	ENSMUSG00000003660	Snrnp200	100	99.719	Mus_musculus
ENSECAG00000019675	SNRNP200	100	99.766	MGP_PahariEiJ_G0025695	Snrnp200	100	99.766	Mus_pahari
ENSECAG00000019675	SNRNP200	100	99.719	MGP_SPRETEiJ_G0025170	Snrnp200	100	99.719	Mus_spretus
ENSECAG00000019675	SNRNP200	100	99.860	ENSMPUG00000008949	SNRNP200	100	99.860	Mustela_putorius_furo
ENSECAG00000019675	SNRNP200	100	95.506	ENSMLUG00000027511	-	100	95.506	Myotis_lucifugus
ENSECAG00000019675	SNRNP200	100	99.205	ENSMLUG00000010493	SNRNP200	100	99.205	Myotis_lucifugus
ENSECAG00000019675	SNRNP200	100	99.860	ENSNGAG00000021993	Snrnp200	100	99.860	Nannospalax_galili
ENSECAG00000019675	SNRNP200	90	90.319	ENSNBRG00000017960	snrnp200	98	90.371	Neolamprologus_brichardi
ENSECAG00000019675	SNRNP200	100	95.212	ENSNLEG00000000025	SNRNP200	100	95.441	Nomascus_leucogenys
ENSECAG00000019675	SNRNP200	100	100.000	ENSMEUG00000010532	SNRNP200	79	100.000	Notamacropus_eugenii
ENSECAG00000019675	SNRNP200	99	97.049	ENSOPRG00000015464	SNRNP200	100	95.927	Ochotona_princeps
ENSECAG00000019675	SNRNP200	100	99.625	ENSODEG00000008366	SNRNP200	100	99.625	Octodon_degus
ENSECAG00000019675	SNRNP200	99	90.559	ENSONIG00000010714	snrnp200	99	90.449	Oreochromis_niloticus
ENSECAG00000019675	SNRNP200	100	99.719	ENSOCUG00000009864	SNRNP200	100	99.719	Oryctolagus_cuniculus
ENSECAG00000019675	SNRNP200	100	90.262	ENSORLG00000012286	snrnp200	100	90.262	Oryzias_latipes
ENSECAG00000019675	SNRNP200	100	90.309	ENSORLG00020004648	snrnp200	100	90.309	Oryzias_latipes_hni
ENSECAG00000019675	SNRNP200	100	90.262	ENSORLG00015019114	snrnp200	100	90.288	Oryzias_latipes_hsok
ENSECAG00000019675	SNRNP200	99	90.512	ENSOMEG00000011834	snrnp200	99	90.403	Oryzias_melastigma
ENSECAG00000019675	SNRNP200	100	99.860	ENSOGAG00000006879	SNRNP200	100	99.860	Otolemur_garnettii
ENSECAG00000019675	SNRNP200	99	99.765	ENSOARG00000013949	SNRNP200	100	98.503	Ovis_aries
ENSECAG00000019675	SNRNP200	100	99.860	ENSPPAG00000041559	SNRNP200	100	99.860	Pan_paniscus
ENSECAG00000019675	SNRNP200	100	99.953	ENSPPRG00000004435	SNRNP200	100	99.953	Panthera_pardus
ENSECAG00000019675	SNRNP200	100	99.485	ENSPTIG00000006380	SNRNP200	100	99.485	Panthera_tigris_altaica
ENSECAG00000019675	SNRNP200	100	99.860	ENSPTRG00000012230	SNRNP200	100	99.860	Pan_troglodytes
ENSECAG00000019675	SNRNP200	100	99.813	ENSPANG00000006017	SNRNP200	100	99.813	Papio_anubis
ENSECAG00000019675	SNRNP200	100	91.152	ENSPKIG00000014762	snrnp200	99	91.152	Paramormyrops_kingsleyae
ENSECAG00000019675	SNRNP200	99	98.239	ENSPSIG00000008580	SNRNP200	100	96.771	Pelodiscus_sinensis
ENSECAG00000019675	SNRNP200	100	99.017	ENSPCIG00000023050	SNRNP200	100	99.017	Phascolarctos_cinereus
ENSECAG00000019675	SNRNP200	100	90.407	ENSPFOG00000015110	snrnp200	99	90.407	Poecilia_formosa
ENSECAG00000019675	SNRNP200	97	90.220	ENSPLAG00000006711	snrnp200	99	90.220	Poecilia_latipinna
ENSECAG00000019675	SNRNP200	97	90.165	ENSPMEG00000021166	snrnp200	99	90.165	Poecilia_mexicana
ENSECAG00000019675	SNRNP200	100	90.496	ENSPREG00000008875	snrnp200	99	90.496	Poecilia_reticulata
ENSECAG00000019675	SNRNP200	100	99.860	ENSPPYG00000012068	SNRNP200	100	99.860	Pongo_abelii
ENSECAG00000019675	SNRNP200	97	98.718	ENSPCAG00000008536	SNRNP200	89	98.718	Procavia_capensis
ENSECAG00000019675	SNRNP200	100	99.860	ENSPCOG00000024608	SNRNP200	100	99.860	Propithecus_coquereli
ENSECAG00000019675	SNRNP200	96	100.000	ENSPVAG00000005860	SNRNP200	93	100.000	Pteropus_vampyrus
ENSECAG00000019675	SNRNP200	99	88.190	ENSPNYG00000017476	snrnp200	99	88.086	Pundamilia_nyererei
ENSECAG00000019675	SNRNP200	100	88.292	ENSPNAG00000010998	snrnp200	99	88.292	Pygocentrus_nattereri
ENSECAG00000019675	SNRNP200	100	99.766	ENSRNOG00000012157	Snrnp200	100	99.766	Rattus_norvegicus
ENSECAG00000019675	SNRNP200	100	99.860	ENSRBIG00000044690	-	100	99.860	Rhinopithecus_bieti
ENSECAG00000019675	SNRNP200	100	99.860	ENSRROG00000037952	-	100	99.860	Rhinopithecus_roxellana
ENSECAG00000019675	SNRNP200	100	99.813	ENSSBOG00000035471	SNRNP200	100	99.813	Saimiri_boliviensis_boliviensis
ENSECAG00000019675	SNRNP200	97	98.936	ENSSHAG00000000758	SNRNP200	100	98.936	Sarcophilus_harrisii
ENSECAG00000019675	SNRNP200	99	91.592	ENSSFOG00015018826	snrnp200	99	91.479	Scleropages_formosus
ENSECAG00000019675	SNRNP200	99	90.512	ENSSMAG00000005463	snrnp200	99	90.403	Scophthalmus_maximus
ENSECAG00000019675	SNRNP200	99	90.794	ENSSDUG00000021410	snrnp200	99	90.684	Seriola_dumerili
ENSECAG00000019675	SNRNP200	99	90.747	ENSSLDG00000010884	snrnp200	99	90.637	Seriola_lalandi_dorsalis
ENSECAG00000019675	SNRNP200	96	100.000	ENSSARG00000010728	SNRNP200	96	100.000	Sorex_araneus
ENSECAG00000019675	SNRNP200	100	97.566	ENSSPUG00000003726	-	100	97.566	Sphenodon_punctatus
ENSECAG00000019675	SNRNP200	99	90.841	ENSSPAG00000001842	snrnp200	99	90.730	Stegastes_partitus
ENSECAG00000019675	SNRNP200	100	99.766	ENSSSCG00000008127	SNRNP200	100	99.766	Sus_scrofa
ENSECAG00000019675	SNRNP200	97	91.565	ENSTGUG00000014475	-	100	91.565	Taeniopygia_guttata
ENSECAG00000019675	SNRNP200	99	90.465	ENSTRUG00000001307	snrnp200	99	90.356	Takifugu_rubripes
ENSECAG00000019675	SNRNP200	99	89.365	ENSTNIG00000004320	snrnp200	99	89.365	Tetraodon_nigroviridis
ENSECAG00000019675	SNRNP200	82	99.495	ENSTBEG00000003329	-	67	99.495	Tupaia_belangeri
ENSECAG00000019675	SNRNP200	100	99.579	ENSTTRG00000004983	SNRNP200	100	99.579	Tursiops_truncatus
ENSECAG00000019675	SNRNP200	77	92.926	ENSUAMG00000008395	-	95	92.926	Ursus_americanus
ENSECAG00000019675	SNRNP200	100	99.953	ENSUMAG00000012385	SNRNP200	100	99.953	Ursus_maritimus
ENSECAG00000019675	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSECAG00000019675	SNRNP200	100	99.952	ENSVVUG00000026247	SNRNP200	100	99.952	Vulpes_vulpes
ENSECAG00000019675	SNRNP200	100	94.390	ENSXETG00000001243	snrnp200	100	94.390	Xenopus_tropicalis
ENSECAG00000019675	SNRNP200	97	90.471	ENSXMAG00000002058	snrnp200	98	90.471	Xiphophorus_maculatus