EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000019769 (Gene tree)
Gene ID: 100060526
Gene Symbol: PPARGC1B
Alias: -
Full Name: PPARG coactivator 1 beta
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 103818 bases
Position: chr14:27395926-27499743
Accession: 21718
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000036213	RRM_1	PF00076.22	1.9e-09	1	1
ENSECAP00000017344	RRM_1	PF00076.22	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000021080	-	3720	-	ENSECAP00000017344	1239 (aa)	-	F7E225
ENSECAT00000061254	-	3603	-	ENSECAP00000036213	1200 (aa)	-	-

Gene Model

Click here to download ENSECAG00000019769's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb04931	Insulin resistance	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000019769's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000019769	PPARGC1B	50	36.408	ENSECAG00000009164	PPARGC1A	77	51.064

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000019769	PPARGC1B	83	83.815	ENSG00000155846	PPARGC1B	100	83.622	Homo_sapiens
ENSECAG00000019769	PPARGC1B	83	85.700	ENSAMEG00000005287	PPARGC1B	100	85.700	Ailuropoda_melanoleuca
ENSECAG00000019769	PPARGC1B	50	36.408	ENSAMEG00000010421	PPARGC1A	78	51.064	Ailuropoda_melanoleuca
ENSECAG00000019769	PPARGC1B	82	49.855	ENSAPLG00000009977	PPARGC1B	94	53.979	Anas_platyrhynchos
ENSECAG00000019769	PPARGC1B	83	47.601	ENSACAG00000015737	PPARGC1B	99	46.950	Anolis_carolinensis
ENSECAG00000019769	PPARGC1B	83	83.638	ENSANAG00000021830	PPARGC1B	100	83.542	Aotus_nancymaae
ENSECAG00000019769	PPARGC1B	56	45.238	ENSAMXG00000010665	ppargc1b	83	45.238	Astyanax_mexicanus
ENSECAG00000019769	PPARGC1B	83	83.946	ENSBTAG00000012943	PPARGC1B	100	84.139	Bos_taurus
ENSECAG00000019769	PPARGC1B	50	36.408	ENSBTAG00000017024	PPARGC1A	78	51.064	Bos_taurus
ENSECAG00000019769	PPARGC1B	96	79.688	ENSCJAG00000021113	PPARGC1B	100	82.877	Callithrix_jacchus
ENSECAG00000019769	PPARGC1B	83	86.074	ENSCAFG00000018275	PPARGC1B	100	85.977	Canis_familiaris
ENSECAG00000019769	PPARGC1B	50	36.408	ENSCAFG00000016519	PPARGC1A	78	51.064	Canis_familiaris
ENSECAG00000019769	PPARGC1B	50	35.821	ENSCAFG00020027242	PPARGC1A	79	50.562	Canis_lupus_dingo
ENSECAG00000019769	PPARGC1B	82	86.030	ENSCAFG00020023524	PPARGC1B	100	85.930	Canis_lupus_dingo
ENSECAG00000019769	PPARGC1B	83	82.432	ENSCHIG00000004409	PPARGC1B	100	82.722	Capra_hircus
ENSECAG00000019769	PPARGC1B	50	38.860	ENSCHIG00000015991	PPARGC1A	80	51.064	Capra_hircus
ENSECAG00000019769	PPARGC1B	81	73.658	ENSTSYG00000034354	PPARGC1B	100	73.837	Carlito_syrichta
ENSECAG00000019769	PPARGC1B	80	77.287	ENSCAPG00000008859	PPARGC1B	99	77.492	Cavia_aperea
ENSECAG00000019769	PPARGC1B	83	79.074	ENSCPOG00000001958	PPARGC1B	100	78.592	Cavia_porcellus
ENSECAG00000019769	PPARGC1B	83	83.896	ENSCCAG00000026909	PPARGC1B	100	83.799	Cebus_capucinus
ENSECAG00000019769	PPARGC1B	82	84.284	ENSCATG00000030402	PPARGC1B	100	84.084	Cercocebus_atys
ENSECAG00000019769	PPARGC1B	83	78.861	ENSCLAG00000015452	PPARGC1B	100	78.089	Chinchilla_lanigera
ENSECAG00000019769	PPARGC1B	81	83.893	ENSCSAG00000011792	PPARGC1B	100	83.992	Chlorocebus_sabaeus
ENSECAG00000019769	PPARGC1B	53	89.286	ENSCHOG00000005517	-	68	89.286	Choloepus_hoffmanni
ENSECAG00000019769	PPARGC1B	83	50.464	ENSCPBG00000007891	PPARGC1B	99	49.818	Chrysemys_picta_bellii
ENSECAG00000019769	PPARGC1B	83	83.654	ENSCANG00000037487	PPARGC1B	100	83.558	Colobus_angolensis_palliatus
ENSECAG00000019769	PPARGC1B	81	75.296	ENSCGRG00001017949	Ppargc1b	96	75.593	Cricetulus_griseus_chok1gshd
ENSECAG00000019769	PPARGC1B	81	74.655	ENSCGRG00000008387	Ppargc1b	99	74.951	Cricetulus_griseus_crigri
ENSECAG00000019769	PPARGC1B	54	39.041	ENSDARG00000101569	ppargc1b	79	39.041	Danio_rerio
ENSECAG00000019769	PPARGC1B	50	36.893	ENSDNOG00000041106	PPARGC1A	78	51.064	Dasypus_novemcinctus
ENSECAG00000019769	PPARGC1B	77	87.267	ENSDNOG00000005985	PPARGC1B	99	87.267	Dasypus_novemcinctus
ENSECAG00000019769	PPARGC1B	82	77.277	ENSDORG00000012605	Ppargc1b	100	77.377	Dipodomys_ordii
ENSECAG00000019769	PPARGC1B	82	98.384	ENSEASG00005002826	PPARGC1B	100	98.384	Equus_asinus_asinus
ENSECAG00000019769	PPARGC1B	50	36.408	ENSEASG00005007984	PPARGC1A	78	51.064	Equus_asinus_asinus
ENSECAG00000019769	PPARGC1B	66	79.911	ENSEEUG00000014903	PPARGC1B	86	81.696	Erinaceus_europaeus
ENSECAG00000019769	PPARGC1B	66	35.222	ENSELUG00000014929	ppargc1b	73	45.312	Esox_lucius
ENSECAG00000019769	PPARGC1B	50	37.374	ENSFCAG00000000043	PPARGC1A	78	51.064	Felis_catus
ENSECAG00000019769	PPARGC1B	81	49.514	ENSFALG00000008858	PPARGC1B	99	50.292	Ficedula_albicollis
ENSECAG00000019769	PPARGC1B	81	75.743	ENSFDAG00000008719	PPARGC1B	99	76.280	Fukomys_damarensis
ENSECAG00000019769	PPARGC1B	76	70.130	ENSGAGG00000012870	PPARGC1B	98	69.136	Gopherus_agassizii
ENSECAG00000019769	PPARGC1B	51	37.019	ENSGAGG00000007043	PPARGC1A	55	53.435	Gopherus_agassizii
ENSECAG00000019769	PPARGC1B	81	81.917	ENSGGOG00000009505	PPARGC1B	100	82.609	Gorilla_gorilla
ENSECAG00000019769	PPARGC1B	83	78.089	ENSHGLG00000005967	PPARGC1B	100	78.475	Heterocephalus_glaber_female
ENSECAG00000019769	PPARGC1B	82	75.724	ENSHGLG00100010588	PPARGC1B	100	76.124	Heterocephalus_glaber_male
ENSECAG00000019769	PPARGC1B	83	83.285	ENSSTOG00000024758	PPARGC1B	100	83.670	Ictidomys_tridecemlineatus
ENSECAG00000019769	PPARGC1B	83	76.618	ENSJJAG00000018633	Ppargc1b	100	76.493	Jaculus_jaculus
ENSECAG00000019769	PPARGC1B	81	37.026	ENSLACG00000011232	PPARGC1B	58	40.102	Latimeria_chalumnae
ENSECAG00000019769	PPARGC1B	53	46.154	ENSLOCG00000012195	ppargc1b	76	46.203	Lepisosteus_oculatus
ENSECAG00000019769	PPARGC1B	81	82.115	ENSLAFG00000012339	PPARGC1B	99	81.641	Loxodonta_africana
ENSECAG00000019769	PPARGC1B	83	84.393	ENSMFAG00000042269	PPARGC1B	100	84.200	Macaca_fascicularis
ENSECAG00000019769	PPARGC1B	83	84.393	ENSMMUG00000004749	PPARGC1B	100	84.200	Macaca_mulatta
ENSECAG00000019769	PPARGC1B	83	84.200	ENSMNEG00000034121	PPARGC1B	100	84.008	Macaca_nemestrina
ENSECAG00000019769	PPARGC1B	81	83.992	ENSMLEG00000040973	PPARGC1B	100	83.794	Mandrillus_leucophaeus
ENSECAG00000019769	PPARGC1B	69	56.395	ENSMGAG00000003134	PPARGC1B	62	82.143	Meleagris_gallopavo
ENSECAG00000019769	PPARGC1B	83	75.865	ENSMAUG00000014191	Ppargc1b	100	75.000	Mesocricetus_auratus
ENSECAG00000019769	PPARGC1B	83	81.528	ENSMICG00000002702	PPARGC1B	100	81.625	Microcebus_murinus
ENSECAG00000019769	PPARGC1B	83	76.879	ENSMOCG00000014885	Ppargc1b	100	76.301	Microtus_ochrogaster
ENSECAG00000019769	PPARGC1B	54	37.089	ENSMODG00000000549	PPARGC1A	84	52.128	Monodelphis_domestica
ENSECAG00000019769	PPARGC1B	81	57.945	ENSMODG00000009891	PPARGC1B	99	56.314	Monodelphis_domestica
ENSECAG00000019769	PPARGC1B	83	74.593	MGP_CAROLIEiJ_G0022323	Ppargc1b	100	74.688	Mus_caroli
ENSECAG00000019769	PPARGC1B	83	74.327	ENSMUSG00000033871	Ppargc1b	100	74.423	Mus_musculus
ENSECAG00000019769	PPARGC1B	83	74.497	MGP_PahariEiJ_G0019053	Ppargc1b	100	73.880	Mus_pahari
ENSECAG00000019769	PPARGC1B	83	74.566	MGP_SPRETEiJ_G0023235	Ppargc1b	100	74.663	Mus_spretus
ENSECAG00000019769	PPARGC1B	50	36.408	ENSMPUG00000016736	PPARGC1A	78	51.064	Mustela_putorius_furo
ENSECAG00000019769	PPARGC1B	83	85.783	ENSMPUG00000014245	PPARGC1B	100	85.397	Mustela_putorius_furo
ENSECAG00000019769	PPARGC1B	75	79.003	ENSMLUG00000013169	PPARGC1B	99	79.114	Myotis_lucifugus
ENSECAG00000019769	PPARGC1B	83	77.101	ENSNGAG00000016998	Ppargc1b	99	76.425	Nannospalax_galili
ENSECAG00000019769	PPARGC1B	83	80.829	ENSNLEG00000010193	PPARGC1B	100	80.732	Nomascus_leucogenys
ENSECAG00000019769	PPARGC1B	81	73.960	ENSOPRG00000010017	PPARGC1B	99	74.653	Ochotona_princeps
ENSECAG00000019769	PPARGC1B	82	77.912	ENSODEG00000004901	PPARGC1B	100	77.912	Octodon_degus
ENSECAG00000019769	PPARGC1B	80	54.363	ENSOANG00000009368	PPARGC1B	99	54.509	Ornithorhynchus_anatinus
ENSECAG00000019769	PPARGC1B	81	77.789	ENSOCUG00000013833	PPARGC1B	100	78.085	Oryctolagus_cuniculus
ENSECAG00000019769	PPARGC1B	81	78.480	ENSOGAG00000015983	PPARGC1B	99	77.444	Otolemur_garnettii
ENSECAG00000019769	PPARGC1B	50	36.408	ENSOARG00000005581	PPARGC1A	75	51.064	Ovis_aries
ENSECAG00000019769	PPARGC1B	82	81.232	ENSOARG00000005658	PPARGC1B	98	81.525	Ovis_aries
ENSECAG00000019769	PPARGC1B	81	83.004	ENSPPAG00000035226	PPARGC1B	100	82.806	Pan_paniscus
ENSECAG00000019769	PPARGC1B	50	37.374	ENSPPRG00000001711	PPARGC1A	78	51.064	Panthera_pardus
ENSECAG00000019769	PPARGC1B	83	85.632	ENSPPRG00000004608	PPARGC1B	100	85.535	Panthera_pardus
ENSECAG00000019769	PPARGC1B	83	83.542	ENSPTIG00000007391	PPARGC1B	100	83.446	Panthera_tigris_altaica
ENSECAG00000019769	PPARGC1B	50	37.374	ENSPTIG00000007378	PPARGC1A	78	51.064	Panthera_tigris_altaica
ENSECAG00000019769	PPARGC1B	83	83.526	ENSPTRG00000017403	PPARGC1B	100	83.333	Pan_troglodytes
ENSECAG00000019769	PPARGC1B	83	84.489	ENSPANG00000009512	PPARGC1B	100	84.297	Papio_anubis
ENSECAG00000019769	PPARGC1B	84	50.596	ENSPSIG00000008358	PPARGC1B	99	51.284	Pelodiscus_sinensis
ENSECAG00000019769	PPARGC1B	83	76.657	ENSPEMG00000018822	Ppargc1b	100	75.167	Peromyscus_maniculatus_bairdii
ENSECAG00000019769	PPARGC1B	74	56.740	ENSPCIG00000020102	PPARGC1B	99	55.119	Phascolarctos_cinereus
ENSECAG00000019769	PPARGC1B	83	84.008	ENSPPYG00000015938	PPARGC1B	100	83.815	Pongo_abelii
ENSECAG00000019769	PPARGC1B	66	83.694	ENSPCAG00000012171	PPARGC1B	80	84.283	Procavia_capensis
ENSECAG00000019769	PPARGC1B	83	84.124	ENSPCOG00000024059	PPARGC1B	100	83.833	Propithecus_coquereli
ENSECAG00000019769	PPARGC1B	83	84.884	ENSPVAG00000001308	PPARGC1B	100	83.818	Pteropus_vampyrus
ENSECAG00000019769	PPARGC1B	51	36.150	ENSPVAG00000004965	PPARGC1A	78	51.064	Pteropus_vampyrus
ENSECAG00000019769	PPARGC1B	59	44.186	ENSPNAG00000023871	ppargc1b	86	44.186	Pygocentrus_nattereri
ENSECAG00000019769	PPARGC1B	83	75.915	ENSRNOG00000017503	Ppargc1b	100	75.241	Rattus_norvegicus
ENSECAG00000019769	PPARGC1B	83	83.349	ENSRBIG00000036724	PPARGC1B	100	83.253	Rhinopithecus_bieti
ENSECAG00000019769	PPARGC1B	80	83.135	ENSRROG00000029594	PPARGC1B	97	83.021	Rhinopithecus_roxellana
ENSECAG00000019769	PPARGC1B	83	83.703	ENSSBOG00000028738	PPARGC1B	100	83.992	Saimiri_boliviensis_boliviensis
ENSECAG00000019769	PPARGC1B	83	57.689	ENSSHAG00000016400	PPARGC1B	99	57.280	Sarcophilus_harrisii
ENSECAG00000019769	PPARGC1B	51	37.089	ENSSHAG00000010033	PPARGC1A	75	52.128	Sarcophilus_harrisii
ENSECAG00000019769	PPARGC1B	51	36.150	ENSSPUG00000013556	PPARGC1A	54	52.128	Sphenodon_punctatus
ENSECAG00000019769	PPARGC1B	82	49.808	ENSSPUG00000019271	PPARGC1B	93	51.658	Sphenodon_punctatus
ENSECAG00000019769	PPARGC1B	50	36.408	ENSSSCG00000029275	PPARGC1A	78	51.064	Sus_scrofa
ENSECAG00000019769	PPARGC1B	83	78.454	ENSSSCG00000014437	PPARGC1B	100	78.454	Sus_scrofa
ENSECAG00000019769	PPARGC1B	81	49.412	ENSTGUG00000000232	PPARGC1B	57	54.054	Taeniopygia_guttata
ENSECAG00000019769	PPARGC1B	82	84.185	ENSTTRG00000008430	PPARGC1B	100	84.283	Tursiops_truncatus
ENSECAG00000019769	PPARGC1B	50	36.408	ENSUMAG00000003557	PPARGC1A	79	51.064	Ursus_maritimus
ENSECAG00000019769	PPARGC1B	83	84.257	ENSUMAG00000005361	PPARGC1B	99	84.354	Ursus_maritimus
ENSECAG00000019769	PPARGC1B	50	36.408	ENSVVUG00000013365	PPARGC1A	78	51.064	Vulpes_vulpes
ENSECAG00000019769	PPARGC1B	83	86.170	ENSVVUG00000014358	PPARGC1B	100	86.170	Vulpes_vulpes
ENSECAG00000019769	PPARGC1B	72	46.742	ENSXETG00000012711	ppargc1b	55	63.636	Xenopus_tropicalis