EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000019897 (Gene tree)
Gene ID: 100065131
Gene Symbol: DDX56
Alias: -
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 7647 bases
Position: chr4:15263558-15271204
Accession: 17105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000017722	ResIII	PF04851.15	5.7e-08	1	1
ENSECAP00000026238	ResIII	PF04851.15	6.5e-08	1	1
ENSECAP00000017722	DEAD	PF00270.29	4.3e-39	1	1
ENSECAP00000026238	DEAD	PF00270.29	4.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000021514	-	1521	-	ENSECAP00000017722	506 (aa)	XP_005609174	F7DHG2
ENSECAT00000036110	-	1857	-	ENSECAP00000026238	546 (aa)	XP_001495871	UPI000C9E03FF

Gene Model

Click here to download ENSECAG00000019897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000019897's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000019897	DDX56	67	31.302	ENSECAG00000015740	DDX18	54	31.302
ENSECAG00000019897	DDX56	74	33.580	ENSECAG00000023622	DDX47	80	35.171
ENSECAG00000019897	DDX56	73	30.273	ENSECAG00000000539	DDX6	74	31.915
ENSECAG00000019897	DDX56	67	30.978	ENSECAG00000017635	-	73	30.894
ENSECAG00000019897	DDX56	69	31.152	ENSECAG00000012286	DDX52	58	32.584
ENSECAG00000019897	DDX56	73	30.864	ENSECAG00000012194	DDX49	75	32.337
ENSECAG00000019897	DDX56	70	30.707	ENSECAG00000021223	EIF4A2	88	30.707
ENSECAG00000019897	DDX56	73	30.256	ENSECAG00000009643	DDX25	80	30.846
ENSECAG00000019897	DDX56	66	30.105	ENSECAG00000009901	DDX3X	55	31.161
ENSECAG00000019897	DDX56	73	32.746	ENSECAG00000020963	DDX27	52	32.754
ENSECAG00000019897	DDX56	58	43.333	ENSECAG00000006958	DDX59	51	43.333
ENSECAG00000019897	DDX56	72	31.529	ENSECAG00000006451	DDX28	72	32.323
ENSECAG00000019897	DDX56	70	30.585	ENSECAG00000015925	EIF4A3	86	30.585
ENSECAG00000019897	DDX56	70	30.518	ENSECAG00000021478	EIF4A1	87	30.518

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000019897	DDX56	100	93.688	ENSG00000136271	DDX56	100	96.000	Homo_sapiens
ENSECAG00000019897	DDX56	98	63.538	ENSAPOG00000017113	ddx56	98	63.177	Acanthochromis_polyacanthus
ENSECAG00000019897	DDX56	100	92.857	ENSAMEG00000017711	DDX56	100	92.125	Ailuropoda_melanoleuca
ENSECAG00000019897	DDX56	92	59.136	ENSACIG00000013747	ddx56	98	65.746	Amphilophus_citrinellus
ENSECAG00000019897	DDX56	97	62.709	ENSAOCG00000018059	ddx56	93	66.200	Amphiprion_ocellaris
ENSECAG00000019897	DDX56	88	66.119	ENSAOCG00000015447	-	87	66.119	Amphiprion_ocellaris
ENSECAG00000019897	DDX56	98	63.934	ENSAPEG00000007267	ddx56	98	63.206	Amphiprion_percula
ENSECAG00000019897	DDX56	97	64.051	ENSATEG00000005279	ddx56	90	67.387	Anabas_testudineus
ENSECAG00000019897	DDX56	98	63.834	ENSACLG00000020113	ddx56	90	67.387	Astatotilapia_calliptera
ENSECAG00000019897	DDX56	98	59.640	ENSAMXG00000019357	ddx56	91	63.725	Astyanax_mexicanus
ENSECAG00000019897	DDX56	100	94.505	ENSBTAG00000010602	DDX56	100	94.505	Bos_taurus
ENSECAG00000019897	DDX56	97	40.603	WBGene00016073	C24H12.4	81	42.015	Caenorhabditis_elegans
ENSECAG00000019897	DDX56	100	92.702	ENSCJAG00000012233	DDX56	100	91.773	Callithrix_jacchus
ENSECAG00000019897	DDX56	82	90.583	ENSCAFG00000029295	DDX56	100	89.686	Canis_familiaris
ENSECAG00000019897	DDX56	100	88.095	ENSCAFG00020019695	DDX56	100	87.912	Canis_lupus_dingo
ENSECAG00000019897	DDX56	100	94.139	ENSCHIG00000014261	DDX56	100	94.139	Capra_hircus
ENSECAG00000019897	DDX56	100	93.491	ENSTSYG00000008048	DDX56	100	93.294	Carlito_syrichta
ENSECAG00000019897	DDX56	86	88.795	ENSCAPG00000006286	DDX56	100	88.372	Cavia_aperea
ENSECAG00000019897	DDX56	100	89.762	ENSCPOG00000003359	DDX56	100	89.397	Cavia_porcellus
ENSECAG00000019897	DDX56	100	92.110	ENSCCAG00000025303	DDX56	100	91.913	Cebus_capucinus
ENSECAG00000019897	DDX56	100	93.676	ENSCATG00000039389	DDX56	100	93.676	Cercocebus_atys
ENSECAG00000019897	DDX56	100	91.209	ENSCLAG00000007666	DDX56	100	91.209	Chinchilla_lanigera
ENSECAG00000019897	DDX56	100	93.601	ENSCSAG00000015636	DDX56	100	92.687	Chlorocebus_sabaeus
ENSECAG00000019897	DDX56	99	69.439	ENSCPBG00000024556	DDX56	99	68.174	Chrysemys_picta_bellii
ENSECAG00000019897	DDX56	92	54.795	ENSCING00000005185	-	99	54.990	Ciona_intestinalis
ENSECAG00000019897	DDX56	91	54.257	ENSCSAVG00000011266	-	99	54.257	Ciona_savignyi
ENSECAG00000019897	DDX56	100	93.294	ENSCANG00000028187	DDX56	100	92.308	Colobus_angolensis_palliatus
ENSECAG00000019897	DDX56	100	89.560	ENSCGRG00001019019	Ddx56	100	89.560	Cricetulus_griseus_chok1gshd
ENSECAG00000019897	DDX56	100	89.560	ENSCGRG00000011870	Ddx56	100	89.560	Cricetulus_griseus_crigri
ENSECAG00000019897	DDX56	98	63.423	ENSCSEG00000008368	ddx56	98	62.883	Cynoglossus_semilaevis
ENSECAG00000019897	DDX56	97	64.706	ENSCVAG00000006499	ddx56	90	67.653	Cyprinodon_variegatus
ENSECAG00000019897	DDX56	98	63.339	ENSDARG00000020913	ddx56	98	63.884	Danio_rerio
ENSECAG00000019897	DDX56	86	89.407	ENSDNOG00000036526	DDX56	99	89.407	Dasypus_novemcinctus
ENSECAG00000019897	DDX56	98	46.909	FBgn0001565	Hlc	89	49.012	Drosophila_melanogaster
ENSECAG00000019897	DDX56	87	61.053	ENSETEG00000019559	-	100	60.211	Echinops_telfairi
ENSECAG00000019897	DDX56	83	80.100	ENSETEG00000002969	-	74	80.100	Echinops_telfairi
ENSECAG00000019897	DDX56	97	58.394	ENSEBUG00000009986	ddx56	92	60.971	Eptatretus_burgeri
ENSECAG00000019897	DDX56	100	99.817	ENSEASG00005017795	DDX56	100	99.817	Equus_asinus_asinus
ENSECAG00000019897	DDX56	86	91.737	ENSEEUG00000004849	DDX56	100	91.737	Erinaceus_europaeus
ENSECAG00000019897	DDX56	97	65.129	ENSELUG00000004150	ddx56	95	63.031	Esox_lucius
ENSECAG00000019897	DDX56	99	92.844	ENSFCAG00000010261	DDX56	99	92.661	Felis_catus
ENSECAG00000019897	DDX56	100	90.659	ENSFDAG00000007128	DDX56	100	90.659	Fukomys_damarensis
ENSECAG00000019897	DDX56	97	64.165	ENSFHEG00000018008	ddx56	95	68.347	Fundulus_heteroclitus
ENSECAG00000019897	DDX56	97	61.152	ENSGAFG00000006906	ddx56	97	61.152	Gambusia_affinis
ENSECAG00000019897	DDX56	93	71.512	ENSGAGG00000006789	DDX56	89	72.144	Gopherus_agassizii
ENSECAG00000019897	DDX56	100	93.688	ENSGGOG00000012031	DDX56	100	92.702	Gorilla_gorilla
ENSECAG00000019897	DDX56	92	62.157	ENSHBUG00000015246	ddx56	91	62.672	Haplochromis_burtoni
ENSECAG00000019897	DDX56	100	91.026	ENSHGLG00000017271	DDX56	100	91.026	Heterocephalus_glaber_female
ENSECAG00000019897	DDX56	100	91.026	ENSHGLG00100015731	DDX56	100	91.026	Heterocephalus_glaber_male
ENSECAG00000019897	DDX56	98	63.486	ENSHCOG00000001685	ddx56	98	62.752	Hippocampus_comes
ENSECAG00000019897	DDX56	98	62.342	ENSIPUG00000006602	ddx56	96	60.694	Ictalurus_punctatus
ENSECAG00000019897	DDX56	100	92.308	ENSSTOG00000000464	DDX56	100	92.308	Ictidomys_tridecemlineatus
ENSECAG00000019897	DDX56	99	89.668	ENSJJAG00000014269	Ddx56	100	89.668	Jaculus_jaculus
ENSECAG00000019897	DDX56	98	62.032	ENSKMAG00000016611	ddx56	96	65.551	Kryptolebias_marmoratus
ENSECAG00000019897	DDX56	98	62.991	ENSLBEG00000026281	ddx56	98	62.664	Labrus_bergylta
ENSECAG00000019897	DDX56	97	67.035	ENSLACG00000015551	DDX56	97	66.969	Latimeria_chalumnae
ENSECAG00000019897	DDX56	97	63.620	ENSLOCG00000015185	ddx56	89	67.258	Lepisosteus_oculatus
ENSECAG00000019897	DDX56	99	91.344	ENSLAFG00000018206	DDX56	99	90.608	Loxodonta_africana
ENSECAG00000019897	DDX56	100	93.478	ENSMFAG00000041001	DDX56	100	93.478	Macaca_fascicularis
ENSECAG00000019897	DDX56	100	93.281	ENSMMUG00000002645	DDX56	100	93.281	Macaca_mulatta
ENSECAG00000019897	DDX56	100	93.676	ENSMNEG00000028492	DDX56	100	93.676	Macaca_nemestrina
ENSECAG00000019897	DDX56	100	94.071	ENSMLEG00000043591	DDX56	100	94.071	Mandrillus_leucophaeus
ENSECAG00000019897	DDX56	97	63.570	ENSMAMG00000007776	ddx56	92	64.510	Mastacembelus_armatus
ENSECAG00000019897	DDX56	98	63.834	ENSMZEG00005009813	ddx56	90	67.387	Maylandia_zebra
ENSECAG00000019897	DDX56	100	93.688	ENSMICG00000005550	DDX56	100	92.505	Microcebus_murinus
ENSECAG00000019897	DDX56	100	90.659	ENSMOCG00000016782	Ddx56	100	90.659	Microtus_ochrogaster
ENSECAG00000019897	DDX56	95	64.205	ENSMMOG00000009654	ddx56	94	67.600	Mola_mola
ENSECAG00000019897	DDX56	100	76.000	ENSMODG00000016137	DDX56	99	76.000	Monodelphis_domestica
ENSECAG00000019897	DDX56	68	64.000	ENSMALG00000016910	ddx56	99	64.000	Monopterus_albus
ENSECAG00000019897	DDX56	100	89.560	MGP_CAROLIEiJ_G0016069	Ddx56	100	89.560	Mus_caroli
ENSECAG00000019897	DDX56	100	89.194	ENSMUSG00000004393	Ddx56	100	89.194	Mus_musculus
ENSECAG00000019897	DDX56	100	89.744	MGP_PahariEiJ_G0016822	Ddx56	100	89.744	Mus_pahari
ENSECAG00000019897	DDX56	100	89.194	MGP_SPRETEiJ_G0016911	Ddx56	100	89.194	Mus_spretus
ENSECAG00000019897	DDX56	100	91.026	ENSMPUG00000018196	DDX56	88	90.293	Mustela_putorius_furo
ENSECAG00000019897	DDX56	100	93.773	ENSMLUG00000003509	DDX56	100	93.040	Myotis_lucifugus
ENSECAG00000019897	DDX56	100	91.209	ENSNGAG00000018785	Ddx56	100	91.209	Nannospalax_galili
ENSECAG00000019897	DDX56	92	67.442	ENSNBRG00000002656	ddx56	91	67.373	Neolamprologus_brichardi
ENSECAG00000019897	DDX56	100	93.688	ENSNLEG00000003816	DDX56	100	92.702	Nomascus_leucogenys
ENSECAG00000019897	DDX56	91	77.621	ENSMEUG00000006788	DDX56	100	77.621	Notamacropus_eugenii
ENSECAG00000019897	DDX56	100	88.848	ENSOPRG00000000292	-	100	87.934	Ochotona_princeps
ENSECAG00000019897	DDX56	69	94.667	ENSODEG00000014807	DDX56	100	94.667	Octodon_degus
ENSECAG00000019897	DDX56	98	65.299	ENSONIG00000011509	ddx56	98	64.925	Oreochromis_niloticus
ENSECAG00000019897	DDX56	97	69.231	ENSOANG00000006320	-	100	69.043	Ornithorhynchus_anatinus
ENSECAG00000019897	DDX56	74	70.968	ENSOANG00000015987	-	95	71.504	Ornithorhynchus_anatinus
ENSECAG00000019897	DDX56	100	88.665	ENSOCUG00000022918	DDX56	100	88.483	Oryctolagus_cuniculus
ENSECAG00000019897	DDX56	98	64.610	ENSORLG00000001434	ddx56	98	64.428	Oryzias_latipes
ENSECAG00000019897	DDX56	98	64.674	ENSORLG00020015718	ddx56	95	64.493	Oryzias_latipes_hni
ENSECAG00000019897	DDX56	98	64.610	ENSORLG00015003004	ddx56	94	64.428	Oryzias_latipes_hsok
ENSECAG00000019897	DDX56	97	65.138	ENSOMEG00000022072	ddx56	90	67.850	Oryzias_melastigma
ENSECAG00000019897	DDX56	100	91.408	ENSOGAG00000009981	DDX56	100	90.494	Otolemur_garnettii
ENSECAG00000019897	DDX56	100	94.322	ENSOARG00000015240	DDX56	100	94.322	Ovis_aries
ENSECAG00000019897	DDX56	100	89.568	ENSPPAG00000029147	DDX56	100	88.669	Pan_paniscus
ENSECAG00000019897	DDX56	100	75.228	ENSPPAG00000031263	-	100	74.135	Pan_paniscus
ENSECAG00000019897	DDX56	99	91.758	ENSPPRG00000014594	DDX56	99	91.758	Panthera_pardus
ENSECAG00000019897	DDX56	86	90.658	ENSPTIG00000019500	DDX56	92	90.446	Panthera_tigris_altaica
ENSECAG00000019897	DDX56	94	77.027	ENSPTRG00000052765	-	100	75.869	Pan_troglodytes
ENSECAG00000019897	DDX56	100	93.294	ENSPTRG00000019147	DDX56	100	92.322	Pan_troglodytes
ENSECAG00000019897	DDX56	100	93.676	ENSPANG00000002446	DDX56	100	93.676	Papio_anubis
ENSECAG00000019897	DDX56	97	64.391	ENSPKIG00000018998	ddx56	89	66.667	Paramormyrops_kingsleyae
ENSECAG00000019897	DDX56	95	65.399	ENSPMGG00000017421	ddx56	95	66.145	Periophthalmus_magnuspinnatus
ENSECAG00000019897	DDX56	100	84.517	ENSPCIG00000009336	DDX56	99	84.153	Phascolarctos_cinereus
ENSECAG00000019897	DDX56	97	63.985	ENSPFOG00000018658	ddx56	97	63.803	Poecilia_formosa
ENSECAG00000019897	DDX56	97	63.985	ENSPLAG00000019208	ddx56	97	63.803	Poecilia_latipinna
ENSECAG00000019897	DDX56	97	63.803	ENSPMEG00000001775	ddx56	97	63.803	Poecilia_mexicana
ENSECAG00000019897	DDX56	97	63.873	ENSPREG00000015142	ddx56	97	63.873	Poecilia_reticulata
ENSECAG00000019897	DDX56	100	93.784	ENSPPYG00000017591	DDX56	100	92.870	Pongo_abelii
ENSECAG00000019897	DDX56	96	90.323	ENSPCAG00000011499	DDX56	100	88.994	Procavia_capensis
ENSECAG00000019897	DDX56	100	94.280	ENSPCOG00000024864	DDX56	100	93.097	Propithecus_coquereli
ENSECAG00000019897	DDX56	88	95.349	ENSPVAG00000000791	DDX56	88	95.349	Pteropus_vampyrus
ENSECAG00000019897	DDX56	98	64.014	ENSPNYG00000019212	ddx56	90	67.583	Pundamilia_nyererei
ENSECAG00000019897	DDX56	98	62.873	ENSPNAG00000025446	ddx56	99	63.246	Pygocentrus_nattereri
ENSECAG00000019897	DDX56	100	90.659	ENSRNOG00000004670	Ddx56	100	90.659	Rattus_norvegicus
ENSECAG00000019897	DDX56	100	93.688	ENSRBIG00000030140	DDX56	100	92.702	Rhinopithecus_bieti
ENSECAG00000019897	DDX56	100	93.491	ENSRROG00000044428	DDX56	100	92.505	Rhinopithecus_roxellana
ENSECAG00000019897	DDX56	96	45.000	YLR276C	-	91	43.066	Saccharomyces_cerevisiae
ENSECAG00000019897	DDX56	100	92.139	ENSSBOG00000034339	DDX56	100	91.225	Saimiri_boliviensis_boliviensis
ENSECAG00000019897	DDX56	85	84.797	ENSSHAG00000016615	DDX56	98	84.368	Sarcophilus_harrisii
ENSECAG00000019897	DDX56	97	65.314	ENSSFOG00015012795	ddx56	90	67.063	Scleropages_formosus
ENSECAG00000019897	DDX56	97	64.000	ENSSMAG00000011280	ddx56	96	63.736	Scophthalmus_maximus
ENSECAG00000019897	DDX56	98	63.243	ENSSDUG00000023597	ddx56	90	67.191	Seriola_dumerili
ENSECAG00000019897	DDX56	98	63.243	ENSSLDG00000018369	ddx56	90	67.191	Seriola_lalandi_dorsalis
ENSECAG00000019897	DDX56	75	91.691	ENSSARG00000014363	DDX56	80	88.643	Sorex_araneus
ENSECAG00000019897	DDX56	99	67.582	ENSSPUG00000000784	DDX56	96	67.033	Sphenodon_punctatus
ENSECAG00000019897	DDX56	92	66.341	ENSSPAG00000009392	ddx56	96	63.752	Stegastes_partitus
ENSECAG00000019897	DDX56	99	94.465	ENSSSCG00000016745	DDX56	99	94.465	Sus_scrofa
ENSECAG00000019897	DDX56	98	63.993	ENSTRUG00000018623	ddx56	98	63.993	Takifugu_rubripes
ENSECAG00000019897	DDX56	98	61.319	ENSTNIG00000013593	ddx56	91	64.660	Tetraodon_nigroviridis
ENSECAG00000019897	DDX56	100	91.392	ENSTBEG00000007119	DDX56	100	91.392	Tupaia_belangeri
ENSECAG00000019897	DDX56	86	94.492	ENSTTRG00000010552	DDX56	100	94.492	Tursiops_truncatus
ENSECAG00000019897	DDX56	100	93.040	ENSUAMG00000014194	DDX56	100	92.308	Ursus_americanus
ENSECAG00000019897	DDX56	100	93.040	ENSUMAG00000009666	DDX56	100	92.308	Ursus_maritimus
ENSECAG00000019897	DDX56	100	91.209	ENSVVUG00000011905	DDX56	100	90.476	Vulpes_vulpes
ENSECAG00000019897	DDX56	98	65.938	ENSXETG00000019000	ddx56	99	66.485	Xenopus_tropicalis
ENSECAG00000019897	DDX56	97	63.158	ENSXCOG00000017413	ddx56	97	63.158	Xiphophorus_couchianus
ENSECAG00000019897	DDX56	97	63.553	ENSXMAG00000018749	ddx56	97	63.128	Xiphophorus_maculatus