EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSECAG00000019911 (Gene tree)
Gene ID
100072510
Gene Symbol
CPSF3
Alias
-
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Equus_caballus
Status
putative
Strand
Minus strand
Length
40488 bases
Position
chr15:85185274-85225761
Accession
16835
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSECAP00000017806CPSF73-100_CPF11718.82.7e-5511
ENSECAP00000033707CPSF73-100_CPF11718.85.7e-3911
ENSECAP00000033707Beta-CaspPF10996.86.7e-3411
ENSECAP00000017806Beta-CaspPF10996.87.3e-3411
ENSECAP00000033707Lactamase_BPF00753.271.4e-1811
ENSECAP00000017806Lactamase_BPF00753.271.7e-1811
ENSECAP00000017806RMMBLPF07521.121.7e-2111
ENSECAP00000033707RMMBLPF07521.122.1e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSECAT00000052051-1851-ENSECAP00000033707616 (aa)--
ENSECAT00000021609-2154XM_001502466ENSECAP00000017806684 (aa)XP_001502516F7CPI2
Gene Model
Click here to download ENSECAG00000019911's gene model file
Pathways
Pathway IDPathway NameSource
ecb03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000019911's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSECAG00000019911CPSF37240.220ENSECAG00000023292INTS115240.220
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSECAG00000019911CPSF310099.415ENSG00000119203CPSF3100100.000Homo_sapiens
ENSECAG00000019911CPSF39690.709ENSAPOG00000022087cpsf39885.420Acanthochromis_polyacanthus
ENSECAG00000019911CPSF38196.994ENSAPOG00000012241CPSF39096.982Acanthochromis_polyacanthus
ENSECAG00000019911CPSF3100100.000ENSAMEG00000008493CPSF3100100.000Ailuropoda_melanoleuca
ENSECAG00000019911CPSF38891.376ENSACIG00000023663CPSF39986.667Amphilophus_citrinellus
ENSECAG00000019911CPSF38987.774ENSACIG00000009846cpsf39982.962Amphilophus_citrinellus
ENSECAG00000019911CPSF39690.709ENSAOCG00000022056cpsf39491.156Amphiprion_ocellaris
ENSECAG00000019911CPSF39693.243ENSAOCG00000010077CPSF39888.235Amphiprion_ocellaris
ENSECAG00000019911CPSF39693.243ENSAPEG00000021167CPSF39888.235Amphiprion_percula
ENSECAG00000019911CPSF39690.878ENSAPEG00000019526cpsf39786.728Amphiprion_percula
ENSECAG00000019911CPSF39690.878ENSATEG00000003959cpsf39885.567Anabas_testudineus
ENSECAG00000019911CPSF39689.207ENSATEG00000014525CPSF39883.529Anabas_testudineus
ENSECAG00000019911CPSF39895.685ENSAPLG00000006941CPSF39895.685Anas_platyrhynchos
ENSECAG00000019911CPSF38996.721ENSACAG00000001759CPSF39992.598Anolis_carolinensis
ENSECAG00000019911CPSF310092.836ENSANAG00000031254CPSF310092.836Aotus_nancymaae
ENSECAG00000019911CPSF38891.193ENSACLG00000018846CPSF39986.508Astatotilapia_calliptera
ENSECAG00000019911CPSF39491.176ENSACLG00000014484cpsf39985.865Astatotilapia_calliptera
ENSECAG00000019911CPSF39692.074ENSAMXG00000004786cpsf39888.382Astyanax_mexicanus
ENSECAG00000019911CPSF310099.854ENSBTAG00000019735CPSF310099.854Bos_taurus
ENSECAG00000019911CPSF39561.564WBGene00013460cpsf-38959.213Caenorhabditis_elegans
ENSECAG00000019911CPSF310099.415ENSCJAG00000006276CPSF310099.415Callithrix_jacchus
ENSECAG00000019911CPSF3100100.000ENSCAFG00000003375CPSF395100.000Canis_familiaris
ENSECAG00000019911CPSF39899.168ENSCAFG00020026799CPSF3100100.000Canis_lupus_dingo
ENSECAG00000019911CPSF310099.854ENSCHIG00000013973CPSF310099.854Capra_hircus
ENSECAG00000019911CPSF310099.415ENSTSYG00000002967CPSF310099.415Carlito_syrichta
ENSECAG00000019911CPSF39897.901ENSCAPG00000013851CPSF310097.901Cavia_aperea
ENSECAG00000019911CPSF310097.953ENSCPOG00000011299CPSF310097.953Cavia_porcellus
ENSECAG00000019911CPSF310099.269ENSCCAG00000036730CPSF310099.269Cebus_capucinus
ENSECAG00000019911CPSF310096.788ENSCATG00000014770CPSF399100.000Cercocebus_atys
ENSECAG00000019911CPSF310097.807ENSCLAG00000002727CPSF310097.807Chinchilla_lanigera
ENSECAG00000019911CPSF310091.667ENSCSAG00000007125CPSF310091.667Chlorocebus_sabaeus
ENSECAG00000019911CPSF386100.000ENSCHOG00000000180CPSF38572.281Choloepus_hoffmanni
ENSECAG00000019911CPSF39996.041ENSCPBG00000014074CPSF39996.041Chrysemys_picta_bellii
ENSECAG00000019911CPSF39673.142ENSCING00000007214-9868.029Ciona_intestinalis
ENSECAG00000019911CPSF310086.257ENSCANG00000034435CPSF310086.257Colobus_angolensis_palliatus
ENSECAG00000019911CPSF310099.123ENSCGRG00001013134Cpsf310099.123Cricetulus_griseus_chok1gshd
ENSECAG00000019911CPSF310099.123ENSCGRG00000018319Cpsf310099.123Cricetulus_griseus_crigri
ENSECAG00000019911CPSF39692.230ENSCSEG00000002021CPSF39986.708Cynoglossus_semilaevis
ENSECAG00000019911CPSF39692.905ENSCVAG00000015067CPSF39888.529Cyprinodon_variegatus
ENSECAG00000019911CPSF39693.761ENSDARG00000027649cpsf39889.118Danio_rerio
ENSECAG00000019911CPSF310097.956ENSDNOG00000008940CPSF39597.956Dasypus_novemcinctus
ENSECAG00000019911CPSF39899.002ENSDORG00000014263Cpsf310099.078Dipodomys_ordii
ENSECAG00000019911CPSF39572.603FBgn0261065Cpsf739867.599Drosophila_melanogaster
ENSECAG00000019911CPSF39785.452ENSETEG00000003893CPSF310085.868Echinops_telfairi
ENSECAG00000019911CPSF39985.458ENSEBUG00000009018cpsf39878.940Eptatretus_burgeri
ENSECAG00000019911CPSF3100100.000ENSEASG00005003970CPSF3100100.000Equus_asinus_asinus
ENSECAG00000019911CPSF310084.064ENSEEUG00000015422CPSF310084.064Erinaceus_europaeus
ENSECAG00000019911CPSF39692.580ENSELUG00000013775cpsf39888.235Esox_lucius
ENSECAG00000019911CPSF310099.854ENSFCAG00000007852CPSF310099.854Felis_catus
ENSECAG00000019911CPSF39595.518ENSFALG00000006572CPSF310095.518Ficedula_albicollis
ENSECAG00000019911CPSF39997.361ENSFDAG00000006317CPSF39997.361Fukomys_damarensis
ENSECAG00000019911CPSF35969.024ENSFHEG00000012186CPSF39969.024Fundulus_heteroclitus
ENSECAG00000019911CPSF39690.034ENSFHEG00000014774cpsf39885.125Fundulus_heteroclitus
ENSECAG00000019911CPSF39692.061ENSGMOG00000003157cpsf39886.765Gadus_morhua
ENSECAG00000019911CPSF39797.333ENSGALG00000016424CPSF39995.007Gallus_gallus
ENSECAG00000019911CPSF39692.905ENSGAFG00000008016CPSF39888.513Gambusia_affinis
ENSECAG00000019911CPSF38987.044ENSGAFG00000019449cpsf39982.989Gambusia_affinis
ENSECAG00000019911CPSF36894.218ENSGAGG00000025583CPSF39394.218Gopherus_agassizii
ENSECAG00000019911CPSF310097.139ENSGGOG00000001757CPSF310099.528Gorilla_gorilla
ENSECAG00000019911CPSF39690.909ENSHBUG00000001188cpsf39985.756Haplochromis_burtoni
ENSECAG00000019911CPSF35388.272ENSHBUG00000014332CPSF39981.728Haplochromis_burtoni
ENSECAG00000019911CPSF310097.076ENSHGLG00000000666CPSF39997.076Heterocephalus_glaber_female
ENSECAG00000019911CPSF310097.076ENSHGLG00100007765CPSF39997.076Heterocephalus_glaber_male
ENSECAG00000019911CPSF39691.568ENSHCOG00000015957CPSF39786.471Hippocampus_comes
ENSECAG00000019911CPSF39690.909ENSHCOG00000007251cpsf39985.044Hippocampus_comes
ENSECAG00000019911CPSF39988.418ENSIPUG00000023488cpsf39887.206Ictalurus_punctatus
ENSECAG00000019911CPSF310099.415ENSSTOG00000004476CPSF310099.415Ictidomys_tridecemlineatus
ENSECAG00000019911CPSF310097.953ENSJJAG00000023415Cpsf310097.953Jaculus_jaculus
ENSECAG00000019911CPSF39690.034ENSKMAG00000002806cpsf39884.831Kryptolebias_marmoratus
ENSECAG00000019911CPSF39692.736ENSKMAG00000007317CPSF39887.794Kryptolebias_marmoratus
ENSECAG00000019911CPSF35185.174ENSLBEG00000015018-9980.161Labrus_bergylta
ENSECAG00000019911CPSF39692.917ENSLBEG00000013492CPSF39889.352Labrus_bergylta
ENSECAG00000019911CPSF39686.678ENSLBEG00000020569cpsf39479.295Labrus_bergylta
ENSECAG00000019911CPSF39687.352ENSLACG00000008308CPSF39883.800Latimeria_chalumnae
ENSECAG00000019911CPSF39792.941ENSLOCG00000016823cpsf39889.280Lepisosteus_oculatus
ENSECAG00000019911CPSF39997.941ENSLAFG00000009467CPSF310097.941Loxodonta_africana
ENSECAG00000019911CPSF310099.415ENSMFAG00000001339CPSF310099.415Macaca_fascicularis
ENSECAG00000019911CPSF397100.000ENSMMUG00000018038CPSF310099.382Macaca_mulatta
ENSECAG00000019911CPSF310086.696ENSMNEG00000039447CPSF310086.696Macaca_nemestrina
ENSECAG00000019911CPSF310099.561ENSMLEG00000026825CPSF310099.561Mandrillus_leucophaeus
ENSECAG00000019911CPSF38890.642ENSMAMG00000008835CPSF39985.443Mastacembelus_armatus
ENSECAG00000019911CPSF39691.047ENSMAMG00000003076cpsf39885.862Mastacembelus_armatus
ENSECAG00000019911CPSF39693.581ENSMZEG00005006258CPSF39888.676Maylandia_zebra
ENSECAG00000019911CPSF39690.909ENSMZEG00005014358cpsf39985.756Maylandia_zebra
ENSECAG00000019911CPSF39895.052ENSMGAG00000013995CPSF310095.052Meleagris_gallopavo
ENSECAG00000019911CPSF35597.606ENSMAUG00000000166Cpsf310097.606Mesocricetus_auratus
ENSECAG00000019911CPSF310094.152ENSMICG00000002363CPSF310094.152Microcebus_murinus
ENSECAG00000019911CPSF39898.669ENSMOCG00000020067Cpsf310094.298Microtus_ochrogaster
ENSECAG00000019911CPSF38071.779ENSMMOG00000011923CPSF38477.857Mola_mola
ENSECAG00000019911CPSF39187.835ENSMMOG00000018212CPSF39882.481Mola_mola
ENSECAG00000019911CPSF310096.237ENSMODG00000014703CPSF310096.237Monodelphis_domestica
ENSECAG00000019911CPSF39691.414ENSMALG00000016416cpsf39986.050Monopterus_albus
ENSECAG00000019911CPSF38990.399ENSMALG00000011474CPSF39983.438Monopterus_albus
ENSECAG00000019911CPSF310098.830MGP_CAROLIEiJ_G0017640Cpsf310098.830Mus_caroli
ENSECAG00000019911CPSF310098.830ENSMUSG00000054309Cpsf310098.830Mus_musculus
ENSECAG00000019911CPSF310098.684MGP_PahariEiJ_G0029397Cpsf310098.684Mus_pahari
ENSECAG00000019911CPSF310098.830MGP_SPRETEiJ_G0018481Cpsf310098.830Mus_spretus
ENSECAG00000019911CPSF310099.269ENSMPUG00000013213CPSF310099.269Mustela_putorius_furo
ENSECAG00000019911CPSF310098.686ENSMLUG00000010636CPSF310098.686Myotis_lucifugus
ENSECAG00000019911CPSF310098.977ENSNGAG00000019836Cpsf310098.977Nannospalax_galili
ENSECAG00000019911CPSF38891.193ENSNBRG00000010525CPSF39986.508Neolamprologus_brichardi
ENSECAG00000019911CPSF39690.572ENSNBRG00000004770cpsf39985.316Neolamprologus_brichardi
ENSECAG00000019911CPSF310099.415ENSNLEG00000013359CPSF310099.415Nomascus_leucogenys
ENSECAG00000019911CPSF310065.497ENSMEUG00000013117-10065.497Notamacropus_eugenii
ENSECAG00000019911CPSF310090.205ENSOPRG00000008902CPSF310090.205Ochotona_princeps
ENSECAG00000019911CPSF310097.368ENSODEG00000003129CPSF310097.368Octodon_degus
ENSECAG00000019911CPSF39690.909ENSONIG00000018812cpsf39985.903Oreochromis_niloticus
ENSECAG00000019911CPSF38296.631ENSOANG00000008577CPSF310096.631Ornithorhynchus_anatinus
ENSECAG00000019911CPSF310099.415ENSOCUG00000003728CPSF310099.415Oryctolagus_cuniculus
ENSECAG00000019911CPSF39689.057ENSORLG00000018854cpsf39983.700Oryzias_latipes
ENSECAG00000019911CPSF39689.057ENSORLG00020013331cpsf39983.554Oryzias_latipes_hni
ENSECAG00000019911CPSF39689.057ENSORLG00015011017cpsf39983.700Oryzias_latipes_hsok
ENSECAG00000019911CPSF39689.226ENSOMEG00000010647cpsf39483.847Oryzias_melastigma
ENSECAG00000019911CPSF310089.474ENSOGAG00000001680CPSF310089.474Otolemur_garnettii
ENSECAG00000019911CPSF310099.854ENSOARG00000015073CPSF310099.854Ovis_aries
ENSECAG00000019911CPSF310099.561ENSPPAG00000042457CPSF310099.561Pan_paniscus
ENSECAG00000019911CPSF310099.561ENSPPRG00000016790CPSF310099.561Panthera_pardus
ENSECAG00000019911CPSF39999.559ENSPTIG00000003920CPSF310099.528Panthera_tigris_altaica
ENSECAG00000019911CPSF310099.561ENSPTRG00000011638CPSF310099.561Pan_troglodytes
ENSECAG00000019911CPSF310099.269ENSPANG00000016798CPSF310099.269Papio_anubis
ENSECAG00000019911CPSF39990.717ENSPKIG00000023646cpsf39989.457Paramormyrops_kingsleyae
ENSECAG00000019911CPSF39796.477ENSPSIG00000016144CPSF310094.290Pelodiscus_sinensis
ENSECAG00000019911CPSF35286.792ENSPMGG00000015311CPSF39979.506Periophthalmus_magnuspinnatus
ENSECAG00000019911CPSF38888.419ENSPMGG00000006141-9985.340Periophthalmus_magnuspinnatus
ENSECAG00000019911CPSF310098.538ENSPEMG00000017668Cpsf310098.538Peromyscus_maniculatus_bairdii
ENSECAG00000019911CPSF38790.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSECAG00000019911CPSF39897.751ENSPCIG00000009823CPSF39897.853Phascolarctos_cinereus
ENSECAG00000019911CPSF39692.736ENSPFOG00000010418-9888.218Poecilia_formosa
ENSECAG00000019911CPSF39689.731ENSPFOG00000015922cpsf39984.897Poecilia_formosa
ENSECAG00000019911CPSF35981.436ENSPLAG00000021300-9981.436Poecilia_latipinna
ENSECAG00000019911CPSF39690.169ENSPLAG00000000882cpsf39984.897Poecilia_latipinna
ENSECAG00000019911CPSF39690.339ENSPMEG00000018309cpsf39985.044Poecilia_mexicana
ENSECAG00000019911CPSF39982.916ENSPREG00000004482CPSF39882.916Poecilia_reticulata
ENSECAG00000019911CPSF38987.044ENSPREG00000014875cpsf39982.830Poecilia_reticulata
ENSECAG00000019911CPSF310095.029ENSPPYG00000012666CPSF310095.029Pongo_abelii
ENSECAG00000019911CPSF39564.209ENSPCAG00000015042CPSF310064.209Procavia_capensis
ENSECAG00000019911CPSF38892.199ENSPCOG00000023016CPSF39892.199Propithecus_coquereli
ENSECAG00000019911CPSF39999.560ENSPVAG00000005324CPSF39999.560Pteropus_vampyrus
ENSECAG00000019911CPSF39690.909ENSPNYG00000004405cpsf39985.756Pundamilia_nyererei
ENSECAG00000019911CPSF38891.193ENSPNYG00000021047CPSF39191.529Pundamilia_nyererei
ENSECAG00000019911CPSF39692.243ENSPNAG00000023060cpsf39887.647Pygocentrus_nattereri
ENSECAG00000019911CPSF39998.827ENSRNOG00000052418Cpsf39998.827Rattus_norvegicus
ENSECAG00000019911CPSF310093.567ENSRBIG00000041615CPSF39994.900Rhinopithecus_bieti
ENSECAG00000019911CPSF310099.561ENSRROG00000033792CPSF310099.561Rhinopithecus_roxellana
ENSECAG00000019911CPSF39343.531YLR277CYSH18443.531Saccharomyces_cerevisiae
ENSECAG00000019911CPSF310093.188ENSSBOG00000027263CPSF310093.188Saimiri_boliviensis_boliviensis
ENSECAG00000019911CPSF310097.953ENSSHAG00000007024CPSF310097.953Sarcophilus_harrisii
ENSECAG00000019911CPSF39692.929ENSSFOG00015002108cpsf39989.721Scleropages_formosus
ENSECAG00000019911CPSF39792.282ENSSMAG00000020534CPSF39587.963Scophthalmus_maximus
ENSECAG00000019911CPSF39693.074ENSSDUG00000018498CPSF39888.382Seriola_dumerili
ENSECAG00000019911CPSF39690.572ENSSDUG00000002828cpsf39685.903Seriola_dumerili
ENSECAG00000019911CPSF39690.847ENSSLDG00000008469cpsf39685.903Seriola_lalandi_dorsalis
ENSECAG00000019911CPSF39693.074ENSSLDG00000005234CPSF39888.382Seriola_lalandi_dorsalis
ENSECAG00000019911CPSF310081.579ENSSARG00000005186CPSF310081.579Sorex_araneus
ENSECAG00000019911CPSF39892.846ENSSPUG00000015525CPSF39792.846Sphenodon_punctatus
ENSECAG00000019911CPSF39692.905ENSSPAG00000002906CPSF39888.088Stegastes_partitus
ENSECAG00000019911CPSF39691.047ENSSPAG00000018579cpsf39885.567Stegastes_partitus
ENSECAG00000019911CPSF39999.854ENSSSCG00000020799CPSF39999.854Sus_scrofa
ENSECAG00000019911CPSF39798.151ENSTGUG00000013016CPSF39995.595Taeniopygia_guttata
ENSECAG00000019911CPSF39690.556ENSTRUG00000007030cpsf39785.294Takifugu_rubripes
ENSECAG00000019911CPSF35973.219ENSTRUG00000013905CPSF39973.219Takifugu_rubripes
ENSECAG00000019911CPSF38593.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSECAG00000019911CPSF38899.462ENSTTRG00000000861CPSF38899.462Tursiops_truncatus
ENSECAG00000019911CPSF39899.168ENSUAMG00000007535CPSF39896.921Ursus_americanus
ENSECAG00000019911CPSF395100.000ENSUMAG00000003676CPSF3100100.000Ursus_maritimus
ENSECAG00000019911CPSF394100.000ENSVPAG00000008041CPSF310096.057Vicugna_pacos
ENSECAG00000019911CPSF3100100.000ENSVVUG00000002194CPSF3100100.000Vulpes_vulpes
ENSECAG00000019911CPSF39794.454ENSXETG00000008263cpsf39890.015Xenopus_tropicalis
ENSECAG00000019911CPSF39689.899ENSXCOG00000019695cpsf39985.191Xiphophorus_couchianus
ENSECAG00000019911CPSF35480.054ENSXCOG00000000957-8780.054Xiphophorus_couchianus
ENSECAG00000019911CPSF39689.899ENSXMAG00000009784cpsf39984.897Xiphophorus_maculatus
ENSECAG00000019911CPSF39692.905ENSXMAG00000027291CPSF39888.365Xiphophorus_maculatus

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