EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000019947 (Gene tree)
Gene ID: 100067814
Gene Symbol: CASC3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 19945 bases
Position: chr11:22423847-22443791
Accession: 54696
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000046090	Btz	PF09405.10	3.6e-23	1	1
ENSECAP00000017628	Btz	PF09405.10	3.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000021406	-	2446	-	ENSECAP00000017628	801 (aa)	-	F7BTY7
ENSECAT00000065529	-	2373	-	ENSECAP00000046090	790 (aa)	-	-

Gene Model

Click here to download ENSECAG00000019947's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03013	RNA transport	KEGG
ecb03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000019947's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000019947	CASC3	88	94.595	ENSG00000108349	CASC3	100	94.595	Homo_sapiens
ENSECAG00000019947	CASC3	73	51.111	ENSAPOG00000008467	casc3	77	53.618	Acanthochromis_polyacanthus
ENSECAG00000019947	CASC3	88	97.013	ENSAMEG00000007764	CASC3	100	97.013	Ailuropoda_melanoleuca
ENSECAG00000019947	CASC3	74	53.055	ENSAOCG00000016676	casc3	77	53.595	Amphiprion_ocellaris
ENSECAG00000019947	CASC3	66	53.055	ENSAPEG00000006787	casc3	77	53.595	Amphiprion_percula
ENSECAG00000019947	CASC3	72	54.430	ENSATEG00000017196	casc3	76	53.871	Anabas_testudineus
ENSECAG00000019947	CASC3	80	72.811	ENSACAG00000002674	CASC3	99	67.804	Anolis_carolinensis
ENSECAG00000019947	CASC3	87	81.988	ENSANAG00000034820	-	99	82.837	Aotus_nancymaae
ENSECAG00000019947	CASC3	58	97.170	ENSANAG00000031954	-	100	97.170	Aotus_nancymaae
ENSECAG00000019947	CASC3	88	96.159	ENSBTAG00000006250	CASC3	100	96.159	Bos_taurus
ENSECAG00000019947	CASC3	88	92.461	ENSCJAG00000016032	CASC3	100	92.461	Callithrix_jacchus
ENSECAG00000019947	CASC3	88	97.155	ENSCAFG00000016141	CASC3	100	97.155	Canis_familiaris
ENSECAG00000019947	CASC3	88	96.165	ENSCAFG00020018882	CASC3	100	96.165	Canis_lupus_dingo
ENSECAG00000019947	CASC3	88	94.737	ENSCHIG00000006338	CASC3	100	94.737	Capra_hircus
ENSECAG00000019947	CASC3	88	89.047	ENSTSYG00000002975	CASC3	89	95.666	Carlito_syrichta
ENSECAG00000019947	CASC3	77	90.097	ENSCAPG00000010514	CASC3	100	90.097	Cavia_aperea
ENSECAG00000019947	CASC3	88	89.474	ENSCPOG00000015139	CASC3	100	89.331	Cavia_porcellus
ENSECAG00000019947	CASC3	88	93.182	ENSCCAG00000033620	CASC3	100	93.324	Cebus_capucinus
ENSECAG00000019947	CASC3	88	95.312	ENSCATG00000033593	CASC3	100	95.312	Cercocebus_atys
ENSECAG00000019947	CASC3	88	90.754	ENSCLAG00000013730	CASC3	100	90.612	Chinchilla_lanigera
ENSECAG00000019947	CASC3	88	95.312	ENSCSAG00000002777	CASC3	100	95.312	Chlorocebus_sabaeus
ENSECAG00000019947	CASC3	88	74.614	ENSCPBG00000004750	CASC3	95	78.583	Chrysemys_picta_bellii
ENSECAG00000019947	CASC3	88	95.170	ENSCANG00000008814	CASC3	100	95.170	Colobus_angolensis_palliatus
ENSECAG00000019947	CASC3	88	93.172	ENSCGRG00001014706	Casc3	100	93.030	Cricetulus_griseus_chok1gshd
ENSECAG00000019947	CASC3	88	85.775	ENSCGRG00000001952	Casc3	96	92.777	Cricetulus_griseus_crigri
ENSECAG00000019947	CASC3	89	94.693	ENSDNOG00000017249	CASC3	98	94.825	Dasypus_novemcinctus
ENSECAG00000019947	CASC3	88	87.624	ENSETEG00000013720	CASC3	100	87.482	Echinops_telfairi
ENSECAG00000019947	CASC3	84	36.170	ENSEBUG00000010654	casc3	100	34.960	Eptatretus_burgeri
ENSECAG00000019947	CASC3	88	98.723	ENSEASG00005002909	CASC3	100	99.408	Equus_asinus_asinus
ENSECAG00000019947	CASC3	65	91.992	ENSEEUG00000014253	CASC3	100	91.992	Erinaceus_europaeus
ENSECAG00000019947	CASC3	88	96.586	ENSFCAG00000014998	CASC3	100	96.586	Felis_catus
ENSECAG00000019947	CASC3	77	74.022	ENSFALG00000000412	CASC3	98	74.214	Ficedula_albicollis
ENSECAG00000019947	CASC3	82	87.823	ENSFDAG00000020696	CASC3	100	87.519	Fukomys_damarensis
ENSECAG00000019947	CASC3	66	54.574	ENSFHEG00000015793	casc3	77	53.698	Fundulus_heteroclitus
ENSECAG00000019947	CASC3	79	76.887	ENSGALG00000031813	CASC3	99	71.591	Gallus_gallus
ENSECAG00000019947	CASC3	63	53.785	ENSGAFG00000017148	casc3	67	49.839	Gambusia_affinis
ENSECAG00000019947	CASC3	78	77.266	ENSGAGG00000008432	CASC3	94	78.352	Gopherus_agassizii
ENSECAG00000019947	CASC3	88	94.310	ENSGGOG00000005067	CASC3	100	94.310	Gorilla_gorilla
ENSECAG00000019947	CASC3	88	90.185	ENSHGLG00000012117	CASC3	100	90.185	Heterocephalus_glaber_female
ENSECAG00000019947	CASC3	78	89.776	ENSHGLG00100002268	CASC3	99	89.727	Heterocephalus_glaber_male
ENSECAG00000019947	CASC3	88	94.452	ENSSTOG00000006374	CASC3	100	94.452	Ictidomys_tridecemlineatus
ENSECAG00000019947	CASC3	88	91.051	ENSJJAG00000023525	Casc3	100	91.193	Jaculus_jaculus
ENSECAG00000019947	CASC3	50	64.634	ENSKMAG00000019507	casc3	81	49.565	Kryptolebias_marmoratus
ENSECAG00000019947	CASC3	56	67.832	ENSLBEG00000005435	casc3	57	60.674	Labrus_bergylta
ENSECAG00000019947	CASC3	79	60.276	ENSLACG00000013200	CASC3	99	56.868	Latimeria_chalumnae
ENSECAG00000019947	CASC3	64	73.430	ENSLOCG00000013518	casc3	71	70.531	Lepisosteus_oculatus
ENSECAG00000019947	CASC3	88	94.452	ENSLAFG00000000606	CASC3	100	94.452	Loxodonta_africana
ENSECAG00000019947	CASC3	88	95.312	ENSMFAG00000041496	CASC3	100	95.312	Macaca_fascicularis
ENSECAG00000019947	CASC3	88	95.312	ENSMMUG00000045187	CASC3	100	95.312	Macaca_mulatta
ENSECAG00000019947	CASC3	78	95.215	ENSMLEG00000029049	CASC3	98	95.192	Mandrillus_leucophaeus
ENSECAG00000019947	CASC3	66	54.724	ENSMAMG00000005235	casc3	69	55.906	Mastacembelus_armatus
ENSECAG00000019947	CASC3	76	76.151	ENSMGAG00000013247	CASC3	99	74.634	Meleagris_gallopavo
ENSECAG00000019947	CASC3	62	91.400	ENSMAUG00000006023	Casc3	80	91.036	Mesocricetus_auratus
ENSECAG00000019947	CASC3	88	92.898	ENSMICG00000003321	CASC3	100	94.034	Microcebus_murinus
ENSECAG00000019947	CASC3	88	92.319	ENSMOCG00000013644	Casc3	100	91.181	Microtus_ochrogaster
ENSECAG00000019947	CASC3	88	78.310	ENSMODG00000013044	CASC3	92	79.887	Monodelphis_domestica
ENSECAG00000019947	CASC3	88	91.323	MGP_CAROLIEiJ_G0017099	Casc3	100	90.896	Mus_caroli
ENSECAG00000019947	CASC3	88	90.469	ENSMUSG00000078676	Casc3	100	90.043	Mus_musculus
ENSECAG00000019947	CASC3	88	90.754	MGP_SPRETEiJ_G0017943	Casc3	100	90.327	Mus_spretus
ENSECAG00000019947	CASC3	88	96.728	ENSMPUG00000014903	CASC3	100	96.728	Mustela_putorius_furo
ENSECAG00000019947	CASC3	88	92.766	ENSMLUG00000010520	CASC3	100	93.191	Myotis_lucifugus
ENSECAG00000019947	CASC3	88	91.607	ENSNGAG00000023121	Casc3	100	91.181	Nannospalax_galili
ENSECAG00000019947	CASC3	88	93.457	ENSNLEG00000001598	CASC3	100	93.457	Nomascus_leucogenys
ENSECAG00000019947	CASC3	73	93.827	ENSMEUG00000015662	CASC3	97	71.429	Notamacropus_eugenii
ENSECAG00000019947	CASC3	65	90.430	ENSOPRG00000007240	-	79	100.000	Ochotona_princeps
ENSECAG00000019947	CASC3	88	89.802	ENSODEG00000017858	CASC3	100	90.085	Octodon_degus
ENSECAG00000019947	CASC3	70	54.671	ENSOANG00000003499	-	83	70.297	Ornithorhynchus_anatinus
ENSECAG00000019947	CASC3	88	94.879	ENSOCUG00000002954	CASC3	100	94.595	Oryctolagus_cuniculus
ENSECAG00000019947	CASC3	88	94.759	ENSOGAG00000034486	CASC3	98	95.279	Otolemur_garnettii
ENSECAG00000019947	CASC3	98	90.518	ENSOARG00000013239	CASC3	100	96.159	Ovis_aries
ENSECAG00000019947	CASC3	88	94.595	ENSPPAG00000035069	CASC3	100	94.595	Pan_paniscus
ENSECAG00000019947	CASC3	88	96.586	ENSPPRG00000023670	CASC3	100	96.586	Panthera_pardus
ENSECAG00000019947	CASC3	80	96.075	ENSPTIG00000010891	CASC3	91	96.075	Panthera_tigris_altaica
ENSECAG00000019947	CASC3	88	95.028	ENSPANG00000021708	CASC3	100	95.028	Papio_anubis
ENSECAG00000019947	CASC3	87	47.421	ENSPKIG00000023186	casc3	98	45.533	Paramormyrops_kingsleyae
ENSECAG00000019947	CASC3	88	93.030	ENSPEMG00000009774	Casc3	100	92.603	Peromyscus_maniculatus_bairdii
ENSECAG00000019947	CASC3	88	81.986	ENSPCIG00000025678	CASC3	100	83.262	Phascolarctos_cinereus
ENSECAG00000019947	CASC3	78	49.377	ENSPFOG00000017632	casc3	92	49.616	Poecilia_formosa
ENSECAG00000019947	CASC3	76	53.937	ENSPLAG00000005268	casc3	61	63.978	Poecilia_latipinna
ENSECAG00000019947	CASC3	60	46.964	ENSPMEG00000010299	casc3	73	48.472	Poecilia_mexicana
ENSECAG00000019947	CASC3	56	67.857	ENSPREG00000011856	casc3	82	51.429	Poecilia_reticulata
ENSECAG00000019947	CASC3	88	93.314	ENSPPYG00000008467	CASC3	100	94.168	Pongo_abelii
ENSECAG00000019947	CASC3	88	92.472	ENSPCOG00000008183	CASC3	100	93.608	Propithecus_coquereli
ENSECAG00000019947	CASC3	88	96.159	ENSPVAG00000008556	CASC3	100	96.159	Pteropus_vampyrus
ENSECAG00000019947	CASC3	80	94.702	ENSRNOG00000009716	Casc3	53	92.035	Rattus_norvegicus
ENSECAG00000019947	CASC3	94	92.819	ENSRBIG00000033289	CASC3	100	94.176	Rhinopithecus_bieti
ENSECAG00000019947	CASC3	88	95.455	ENSRROG00000022337	CASC3	100	95.455	Rhinopithecus_roxellana
ENSECAG00000019947	CASC3	77	91.586	ENSSBOG00000031406	CASC3	98	93.366	Saimiri_boliviensis_boliviensis
ENSECAG00000019947	CASC3	78	85.350	ENSSHAG00000013338	CASC3	99	84.960	Sarcophilus_harrisii
ENSECAG00000019947	CASC3	65	67.361	ENSSMAG00000016096	casc3	57	61.585	Scophthalmus_maximus
ENSECAG00000019947	CASC3	53	76.271	ENSSLDG00000020308	casc3	66	76.271	Seriola_lalandi_dorsalis
ENSECAG00000019947	CASC3	74	83.502	ENSSARG00000010378	CASC3	98	83.502	Sorex_araneus
ENSECAG00000019947	CASC3	65	53.012	ENSSPAG00000023008	casc3	70	54.231	Stegastes_partitus
ENSECAG00000019947	CASC3	78	95.048	ENSSSCG00000017477	CASC3	98	95.024	Sus_scrofa
ENSECAG00000019947	CASC3	65	74.811	ENSTGUG00000002300	CASC3	99	74.811	Taeniopygia_guttata
ENSECAG00000019947	CASC3	58	98.113	ENSTBEG00000017459	CASC3	67	98.113	Tupaia_belangeri
ENSECAG00000019947	CASC3	75	86.424	ENSTTRG00000016896	CASC3	98	86.364	Tursiops_truncatus
ENSECAG00000019947	CASC3	88	95.597	ENSUAMG00000015116	CASC3	100	95.597	Ursus_americanus
ENSECAG00000019947	CASC3	78	96.006	ENSUMAG00000017697	CASC3	99	96.006	Ursus_maritimus
ENSECAG00000019947	CASC3	66	100.000	ENSVPAG00000000799	CASC3	75	100.000	Vicugna_pacos
ENSECAG00000019947	CASC3	88	97.297	ENSVVUG00000000997	CASC3	100	97.297	Vulpes_vulpes
ENSECAG00000019947	CASC3	78	60.093	ENSXETG00000024395	casc3	98	57.815	Xenopus_tropicalis