EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSECAG00000019988 (Gene tree)
Gene ID: 100058317
Gene Symbol: RPUSD3
Alias: -
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 6507 bases
Position: chr16:8456493-8462999
Accession: 22573
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000017489	PseudoU_synth_2	PF00849.22	6.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000021244	-	1337	XM_001491328	ENSECAP00000017489	360 (aa)	XP_001491378	F7D861

Gene Model

Click here to download ENSECAG00000019988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000019988's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSECAG00000019988	RPUSD3	76	31.707	ENSECAG00000000557	RPUSD4	71	31.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000019988	RPUSD3	97	82.521	ENSG00000156990	RPUSD3	99	82.521	Homo_sapiens
ENSECAG00000019988	RPUSD3	98	82.102	ENSAMEG00000016227	RPUSD3	100	82.102	Ailuropoda_melanoleuca
ENSECAG00000019988	RPUSD3	78	55.160	ENSACAG00000009836	RPUSD3	80	55.160	Anolis_carolinensis
ENSECAG00000019988	RPUSD3	67	71.784	ENSANAG00000019945	-	90	71.784	Aotus_nancymaae
ENSECAG00000019988	RPUSD3	53	81.481	ENSANAG00000038118	-	90	81.481	Aotus_nancymaae
ENSECAG00000019988	RPUSD3	76	59.028	ENSANAG00000007127	-	98	59.028	Aotus_nancymaae
ENSECAG00000019988	RPUSD3	96	80.814	ENSBTAG00000007968	RPUSD3	100	80.814	Bos_taurus
ENSECAG00000019988	RPUSD3	98	81.250	ENSCAFG00000029733	RPUSD3	100	81.250	Canis_familiaris
ENSECAG00000019988	RPUSD3	98	81.250	ENSCAFG00020008582	RPUSD3	100	81.250	Canis_lupus_dingo
ENSECAG00000019988	RPUSD3	96	79.651	ENSCHIG00000026027	RPUSD3	100	79.651	Capra_hircus
ENSECAG00000019988	RPUSD3	94	76.540	ENSTSYG00000009994	RPUSD3	97	76.540	Carlito_syrichta
ENSECAG00000019988	RPUSD3	73	81.749	ENSCAPG00000017559	RPUSD3	99	81.749	Cavia_aperea
ENSECAG00000019988	RPUSD3	73	81.439	ENSCPOG00000037956	RPUSD3	92	67.806	Cavia_porcellus
ENSECAG00000019988	RPUSD3	97	80.229	ENSCCAG00000029530	RPUSD3	100	79.830	Cebus_capucinus
ENSECAG00000019988	RPUSD3	97	82.808	ENSCATG00000036939	RPUSD3	99	82.808	Cercocebus_atys
ENSECAG00000019988	RPUSD3	97	82.521	ENSCSAG00000010506	RPUSD3	100	82.102	Chlorocebus_sabaeus
ENSECAG00000019988	RPUSD3	71	55.253	ENSCPBG00000008825	RPUSD3	84	56.109	Chrysemys_picta_bellii
ENSECAG00000019988	RPUSD3	97	82.521	ENSCANG00000040711	RPUSD3	99	82.521	Colobus_angolensis_palliatus
ENSECAG00000019988	RPUSD3	97	73.143	ENSCGRG00001004923	Rpusd3	97	73.143	Cricetulus_griseus_chok1gshd
ENSECAG00000019988	RPUSD3	96	73.547	ENSCGRG00000018315	Rpusd3	100	73.547	Cricetulus_griseus_crigri
ENSECAG00000019988	RPUSD3	98	75.499	ENSDNOG00000039160	RPUSD3	93	75.499	Dasypus_novemcinctus
ENSECAG00000019988	RPUSD3	72	77.239	ENSDORG00000026827	Rpusd3	92	77.239	Dipodomys_ordii
ENSECAG00000019988	RPUSD3	98	73.580	ENSETEG00000006538	RPUSD3	99	73.580	Echinops_telfairi
ENSECAG00000019988	RPUSD3	57	38.350	ENSEBUG00000015605	RPUSD3	67	38.350	Eptatretus_burgeri
ENSECAG00000019988	RPUSD3	100	97.500	ENSEASG00005014160	RPUSD3	100	97.500	Equus_asinus_asinus
ENSECAG00000019988	RPUSD3	95	60.345	ENSEEUG00000007353	RPUSD3	98	60.345	Erinaceus_europaeus
ENSECAG00000019988	RPUSD3	98	82.386	ENSFCAG00000014199	RPUSD3	100	82.386	Felis_catus
ENSECAG00000019988	RPUSD3	75	48.529	ENSFALG00000012968	RPUSD3	85	49.345	Ficedula_albicollis
ENSECAG00000019988	RPUSD3	74	80.377	ENSFDAG00000008350	RPUSD3	90	74.497	Fukomys_damarensis
ENSECAG00000019988	RPUSD3	73	56.654	ENSGAGG00000007493	RPUSD3	73	57.709	Gopherus_agassizii
ENSECAG00000019988	RPUSD3	97	82.235	ENSGGOG00000013120	RPUSD3	99	82.235	Gorilla_gorilla
ENSECAG00000019988	RPUSD3	96	63.753	ENSHGLG00000011722	RPUSD3	100	63.753	Heterocephalus_glaber_female
ENSECAG00000019988	RPUSD3	96	63.753	ENSHGLG00100016038	RPUSD3	100	63.753	Heterocephalus_glaber_male
ENSECAG00000019988	RPUSD3	98	77.273	ENSSTOG00000002125	RPUSD3	100	77.273	Ictidomys_tridecemlineatus
ENSECAG00000019988	RPUSD3	96	71.221	ENSJJAG00000012679	Rpusd3	100	71.221	Jaculus_jaculus
ENSECAG00000019988	RPUSD3	94	80.236	ENSLAFG00000017501	RPUSD3	99	80.236	Loxodonta_africana
ENSECAG00000019988	RPUSD3	97	81.948	ENSMFAG00000032407	RPUSD3	99	81.948	Macaca_fascicularis
ENSECAG00000019988	RPUSD3	97	77.937	ENSMMUG00000010628	RPUSD3	96	85.761	Macaca_mulatta
ENSECAG00000019988	RPUSD3	97	81.662	ENSMNEG00000040308	RPUSD3	99	81.662	Macaca_nemestrina
ENSECAG00000019988	RPUSD3	97	82.521	ENSMLEG00000033940	RPUSD3	99	82.521	Mandrillus_leucophaeus
ENSECAG00000019988	RPUSD3	96	74.277	ENSMAUG00000015473	Rpusd3	100	74.277	Mesocricetus_auratus
ENSECAG00000019988	RPUSD3	96	80.233	ENSMICG00000002315	RPUSD3	100	80.233	Microcebus_murinus
ENSECAG00000019988	RPUSD3	96	73.256	ENSMOCG00000022613	Rpusd3	100	73.256	Microtus_ochrogaster
ENSECAG00000019988	RPUSD3	93	56.083	ENSMODG00000005210	RPUSD3	77	55.973	Monodelphis_domestica
ENSECAG00000019988	RPUSD3	96	74.128	MGP_CAROLIEiJ_G0028725	Rpusd3	100	74.128	Mus_caroli
ENSECAG00000019988	RPUSD3	96	74.128	ENSMUSG00000051169	Rpusd3	100	74.128	Mus_musculus
ENSECAG00000019988	RPUSD3	96	74.128	MGP_PahariEiJ_G0022476	Rpusd3	100	74.128	Mus_pahari
ENSECAG00000019988	RPUSD3	96	73.547	MGP_SPRETEiJ_G0029753	Rpusd3	100	73.547	Mus_spretus
ENSECAG00000019988	RPUSD3	98	79.830	ENSMPUG00000017132	RPUSD3	100	79.830	Mustela_putorius_furo
ENSECAG00000019988	RPUSD3	96	83.815	ENSMLUG00000006135	RPUSD3	99	83.815	Myotis_lucifugus
ENSECAG00000019988	RPUSD3	95	73.314	ENSNGAG00000023704	Rpusd3	99	73.314	Nannospalax_galili
ENSECAG00000019988	RPUSD3	97	69.054	ENSNLEG00000004214	RPUSD3	94	84.577	Nomascus_leucogenys
ENSECAG00000019988	RPUSD3	72	64.751	ENSMEUG00000013098	-	84	66.972	Notamacropus_eugenii
ENSECAG00000019988	RPUSD3	93	62.426	ENSOPRG00000002300	RPUSD3	96	62.426	Ochotona_princeps
ENSECAG00000019988	RPUSD3	73	79.167	ENSODEG00000018137	RPUSD3	91	79.167	Octodon_degus
ENSECAG00000019988	RPUSD3	79	50.000	ENSOANG00000012081	-	84	50.826	Ornithorhynchus_anatinus
ENSECAG00000019988	RPUSD3	96	66.854	ENSOCUG00000027885	RPUSD3	100	66.854	Oryctolagus_cuniculus
ENSECAG00000019988	RPUSD3	87	82.166	ENSOGAG00000012592	RPUSD3	100	82.166	Otolemur_garnettii
ENSECAG00000019988	RPUSD3	98	80.627	ENSOARG00000005928	RPUSD3	99	80.627	Ovis_aries
ENSECAG00000019988	RPUSD3	98	82.102	ENSPPAG00000038083	RPUSD3	100	82.102	Pan_paniscus
ENSECAG00000019988	RPUSD3	98	83.523	ENSPPRG00000024433	RPUSD3	100	83.523	Panthera_pardus
ENSECAG00000019988	RPUSD3	96	84.302	ENSPTIG00000006828	RPUSD3	100	84.302	Panthera_tigris_altaica
ENSECAG00000019988	RPUSD3	98	81.818	ENSPTRG00000051760	RPUSD3	100	81.818	Pan_troglodytes
ENSECAG00000019988	RPUSD3	97	82.521	ENSPANG00000023885	RPUSD3	100	82.102	Papio_anubis
ENSECAG00000019988	RPUSD3	96	74.709	ENSPEMG00000017245	Rpusd3	100	74.709	Peromyscus_maniculatus_bairdii
ENSECAG00000019988	RPUSD3	94	58.284	ENSPCIG00000021901	RPUSD3	83	59.107	Phascolarctos_cinereus
ENSECAG00000019988	RPUSD3	98	81.534	ENSPPYG00000013676	RPUSD3	100	81.534	Pongo_abelii
ENSECAG00000019988	RPUSD3	80	61.592	ENSPCAG00000013731	-	100	61.592	Procavia_capensis
ENSECAG00000019988	RPUSD3	98	83.239	ENSPCOG00000018314	RPUSD3	100	83.239	Propithecus_coquereli
ENSECAG00000019988	RPUSD3	98	79.830	ENSPVAG00000011107	RPUSD3	100	79.830	Pteropus_vampyrus
ENSECAG00000019988	RPUSD3	96	68.895	ENSRNOG00000009084	Rpusd3	100	68.895	Rattus_norvegicus
ENSECAG00000019988	RPUSD3	97	83.381	ENSRBIG00000041230	RPUSD3	99	83.381	Rhinopithecus_bieti
ENSECAG00000019988	RPUSD3	97	83.381	ENSRROG00000043328	RPUSD3	99	83.381	Rhinopithecus_roxellana
ENSECAG00000019988	RPUSD3	97	80.802	ENSSBOG00000036106	RPUSD3	99	80.802	Saimiri_boliviensis_boliviensis
ENSECAG00000019988	RPUSD3	86	58.766	ENSSHAG00000015536	RPUSD3	86	58.868	Sarcophilus_harrisii
ENSECAG00000019988	RPUSD3	98	80.966	ENSSSCG00000011555	RPUSD3	100	80.966	Sus_scrofa
ENSECAG00000019988	RPUSD3	60	51.613	ENSTGUG00000008744	RPUSD3	93	51.613	Taeniopygia_guttata
ENSECAG00000019988	RPUSD3	80	76.471	ENSTBEG00000000176	RPUSD3	100	76.471	Tupaia_belangeri
ENSECAG00000019988	RPUSD3	98	81.534	ENSTTRG00000007544	RPUSD3	100	81.534	Tursiops_truncatus
ENSECAG00000019988	RPUSD3	87	85.032	ENSUAMG00000011354	RPUSD3	98	85.032	Ursus_americanus
ENSECAG00000019988	RPUSD3	98	82.955	ENSUMAG00000018830	RPUSD3	100	82.955	Ursus_maritimus
ENSECAG00000019988	RPUSD3	96	82.558	ENSVVUG00000023735	RPUSD3	100	82.558	Vulpes_vulpes
ENSECAG00000019988	RPUSD3	78	51.064	ENSXETG00000023546	rpusd3	99	51.064	Xenopus_tropicalis