EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000020058 (Gene tree)
Gene ID: 100052355
Gene Symbol: PNPT1
Alias: -
Full Name: polyribonucleotide nucleotidyltransferase 1
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Plus strand
Length: 44561 bases
Position: chr15:45589713-45634273
Accession: 21640
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000018223	KH_1	PF00013.29	1.1e-06	1	1
ENSECAP00000018208	KH_1	PF00013.29	1.3e-06	1	1
ENSECAP00000018208	RNase_PH	PF01138.21	2.9e-40	1	2
ENSECAP00000018208	RNase_PH	PF01138.21	2.9e-40	2	2
ENSECAP00000018223	RNase_PH	PF01138.21	8.5e-34	1	2
ENSECAP00000018223	RNase_PH	PF01138.21	8.5e-34	2	2
ENSECAP00000018223	PNPase	PF03726.14	1e-08	1	1
ENSECAP00000018208	PNPase	PF03726.14	1.2e-08	1	1
ENSECAP00000018223	S1	PF00575.23	3.2e-05	1	1
ENSECAP00000018208	S1	PF00575.23	3.4e-05	1	1
ENSECAP00000018223	RNase_PH_C	PF03725.15	1.3e-16	1	1
ENSECAP00000018208	RNase_PH_C	PF03725.15	1.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000022076	-	2181	-	ENSECAP00000018223	726 (aa)	-	F6TCK1
ENSECAT00000022054	-	2406	XM_005599973	ENSECAP00000018208	801 (aa)	XP_005600030	F6TJZ6

Gene Model

Click here to download ENSECAG00000020058's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000020058's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000020058	PNPT1	98	95.205	ENSG00000138035	PNPT1	99	94.567	Homo_sapiens
ENSECAG00000020058	PNPT1	95	79.827	ENSAPOG00000005581	PNPT1	98	78.423	Acanthochromis_polyacanthus
ENSECAG00000020058	PNPT1	97	95.349	ENSAMEG00000003772	PNPT1	99	95.349	Ailuropoda_melanoleuca
ENSECAG00000020058	PNPT1	98	78.762	ENSACIG00000010140	PNPT1	98	79.552	Amphilophus_citrinellus
ENSECAG00000020058	PNPT1	98	79.466	ENSAOCG00000020109	PNPT1	95	79.918	Amphiprion_ocellaris
ENSECAG00000020058	PNPT1	98	77.356	ENSAPEG00000002299	PNPT1	98	77.808	Amphiprion_percula
ENSECAG00000020058	PNPT1	97	80.627	ENSATEG00000011164	PNPT1	95	80.464	Anabas_testudineus
ENSECAG00000020058	PNPT1	98	82.444	ENSAPLG00000002885	PNPT1	99	82.897	Anas_platyrhynchos
ENSECAG00000020058	PNPT1	98	82.982	ENSACAG00000003692	PNPT1	98	80.332	Anolis_carolinensis
ENSECAG00000020058	PNPT1	97	94.872	ENSANAG00000023709	PNPT1	99	94.179	Aotus_nancymaae
ENSECAG00000020058	PNPT1	98	79.325	ENSACLG00000024267	PNPT1	98	78.029	Astatotilapia_calliptera
ENSECAG00000020058	PNPT1	97	78.390	ENSAMXG00000042321	PNPT1	99	78.809	Astyanax_mexicanus
ENSECAG00000020058	PNPT1	97	94.308	ENSBTAG00000008909	PNPT1	99	94.308	Bos_taurus
ENSECAG00000020058	PNPT1	94	42.424	WBGene00015266	BE0003N10.1	96	42.345	Caenorhabditis_elegans
ENSECAG00000020058	PNPT1	97	94.729	ENSCJAG00000009740	PNPT1	99	94.437	Callithrix_jacchus
ENSECAG00000020058	PNPT1	96	92.176	ENSCAFG00000002891	PNPT1	99	89.487	Canis_familiaris
ENSECAG00000020058	PNPT1	97	95.213	ENSCAFG00020026841	PNPT1	99	95.213	Canis_lupus_dingo
ENSECAG00000020058	PNPT1	97	91.074	ENSCHIG00000025034	PNPT1	99	91.074	Capra_hircus
ENSECAG00000020058	PNPT1	97	93.532	ENSTSYG00000006536	PNPT1	99	93.532	Carlito_syrichta
ENSECAG00000020058	PNPT1	97	71.893	ENSCAPG00000013300	PNPT1	98	72.500	Cavia_aperea
ENSECAG00000020058	PNPT1	97	91.453	ENSCPOG00000011008	PNPT1	99	91.074	Cavia_porcellus
ENSECAG00000020058	PNPT1	97	94.302	ENSCCAG00000037909	PNPT1	99	93.402	Cebus_capucinus
ENSECAG00000020058	PNPT1	98	71.932	ENSCATG00000036442	-	98	70.428	Cercocebus_atys
ENSECAG00000020058	PNPT1	98	95.346	ENSCATG00000031551	PNPT1	99	93.273	Cercocebus_atys
ENSECAG00000020058	PNPT1	97	93.162	ENSCLAG00000006240	PNPT1	99	92.367	Chinchilla_lanigera
ENSECAG00000020058	PNPT1	98	95.211	ENSCSAG00000014324	PNPT1	99	94.444	Chlorocebus_sabaeus
ENSECAG00000020058	PNPT1	97	81.766	ENSCHOG00000007360	PNPT1	98	82.476	Choloepus_hoffmanni
ENSECAG00000020058	PNPT1	98	84.225	ENSCPBG00000020856	PNPT1	99	81.679	Chrysemys_picta_bellii
ENSECAG00000020058	PNPT1	98	74.262	ENSCANG00000028159	-	98	72.608	Colobus_angolensis_palliatus
ENSECAG00000020058	PNPT1	98	95.063	ENSCANG00000034019	PNPT1	99	94.567	Colobus_angolensis_palliatus
ENSECAG00000020058	PNPT1	97	92.735	ENSCGRG00001012245	Pnpt1	99	90.886	Cricetulus_griseus_chok1gshd
ENSECAG00000020058	PNPT1	97	92.593	ENSCGRG00000007624	Pnpt1	99	91.462	Cricetulus_griseus_crigri
ENSECAG00000020058	PNPT1	97	75.356	ENSCSEG00000000809	PNPT1	99	75.809	Cynoglossus_semilaevis
ENSECAG00000020058	PNPT1	83	79.443	ENSCVAG00000010037	PNPT1	96	81.159	Cyprinodon_variegatus
ENSECAG00000020058	PNPT1	96	93.714	ENSDNOG00000046753	PNPT1	99	92.885	Dasypus_novemcinctus
ENSECAG00000020058	PNPT1	96	94.429	ENSDORG00000011409	Pnpt1	98	92.626	Dipodomys_ordii
ENSECAG00000020058	PNPT1	95	58.273	FBgn0039846	PNPase	93	58.263	Drosophila_melanogaster
ENSECAG00000020058	PNPT1	96	69.971	ENSETEG00000001582	-	99	67.829	Echinops_telfairi
ENSECAG00000020058	PNPT1	96	54.429	ENSEBUG00000010305	PNPT1	94	55.201	Eptatretus_burgeri
ENSECAG00000020058	PNPT1	98	99.872	ENSEASG00005001974	PNPT1	100	99.872	Equus_asinus_asinus
ENSECAG00000020058	PNPT1	97	83.119	ENSEEUG00000015610	PNPT1	99	83.119	Erinaceus_europaeus
ENSECAG00000020058	PNPT1	98	78.481	ENSELUG00000004795	PNPT1	97	77.867	Esox_lucius
ENSECAG00000020058	PNPT1	98	96.765	ENSFCAG00000013236	PNPT1	100	96.429	Felis_catus
ENSECAG00000020058	PNPT1	98	82.228	ENSFALG00000011214	PNPT1	98	82.985	Ficedula_albicollis
ENSECAG00000020058	PNPT1	98	92.948	ENSFDAG00000017446	PNPT1	99	90.944	Fukomys_damarensis
ENSECAG00000020058	PNPT1	98	78.622	ENSFHEG00000006495	PNPT1	98	79.722	Fundulus_heteroclitus
ENSECAG00000020058	PNPT1	97	75.989	ENSGMOG00000006805	PNPT1	95	76.511	Gadus_morhua
ENSECAG00000020058	PNPT1	99	81.564	ENSGALG00000043545	PNPT1	91	82.531	Gallus_gallus
ENSECAG00000020058	PNPT1	98	78.200	ENSGAFG00000019681	PNPT1	98	77.978	Gambusia_affinis
ENSECAG00000020058	PNPT1	96	78.063	ENSGACG00000010840	PNPT1	98	76.096	Gasterosteus_aculeatus
ENSECAG00000020058	PNPT1	98	95.346	ENSGGOG00000006867	PNPT1	99	94.696	Gorilla_gorilla
ENSECAG00000020058	PNPT1	97	79.487	ENSGGOG00000041496	-	98	78.982	Gorilla_gorilla
ENSECAG00000020058	PNPT1	98	79.184	ENSHBUG00000013041	PNPT1	94	79.780	Haplochromis_burtoni
ENSECAG00000020058	PNPT1	96	93.000	ENSHGLG00000007480	PNPT1	99	91.979	Heterocephalus_glaber_female
ENSECAG00000020058	PNPT1	86	87.360	ENSHGLG00000010054	-	95	83.954	Heterocephalus_glaber_female
ENSECAG00000020058	PNPT1	96	93.000	ENSHGLG00100010920	PNPT1	99	91.979	Heterocephalus_glaber_male
ENSECAG00000020058	PNPT1	96	81.429	ENSHGLG00100007397	-	98	78.913	Heterocephalus_glaber_male
ENSECAG00000020058	PNPT1	96	66.286	ENSHCOG00000002817	PNPT1	98	64.828	Hippocampus_comes
ENSECAG00000020058	PNPT1	98	78.169	ENSIPUG00000014624	PNPT1	99	79.057	Ictalurus_punctatus
ENSECAG00000020058	PNPT1	98	94.093	ENSSTOG00000006304	PNPT1	99	93.144	Ictidomys_tridecemlineatus
ENSECAG00000020058	PNPT1	97	93.162	ENSJJAG00000019227	Pnpt1	99	91.850	Jaculus_jaculus
ENSECAG00000020058	PNPT1	98	77.637	ENSKMAG00000017389	PNPT1	95	78.875	Kryptolebias_marmoratus
ENSECAG00000020058	PNPT1	97	78.076	ENSLBEG00000027692	PNPT1	97	77.222	Labrus_bergylta
ENSECAG00000020058	PNPT1	96	81.702	ENSLACG00000011059	PNPT1	99	82.659	Latimeria_chalumnae
ENSECAG00000020058	PNPT1	98	78.481	ENSLOCG00000015375	PNPT1	93	78.484	Lepisosteus_oculatus
ENSECAG00000020058	PNPT1	97	86.099	ENSLAFG00000021462	PNPT1	99	85.954	Loxodonta_africana
ENSECAG00000020058	PNPT1	98	95.346	ENSMFAG00000001927	PNPT1	99	94.567	Macaca_fascicularis
ENSECAG00000020058	PNPT1	93	94.976	ENSMMUG00000007003	PNPT1	98	96.410	Macaca_mulatta
ENSECAG00000020058	PNPT1	98	95.487	ENSMNEG00000038589	PNPT1	99	95.688	Macaca_nemestrina
ENSECAG00000020058	PNPT1	98	91.819	ENSMLEG00000038706	PNPT1	99	91.591	Mandrillus_leucophaeus
ENSECAG00000020058	PNPT1	98	69.958	ENSMLEG00000028524	-	98	68.872	Mandrillus_leucophaeus
ENSECAG00000020058	PNPT1	97	74.366	ENSMAMG00000021954	PNPT1	99	71.613	Mastacembelus_armatus
ENSECAG00000020058	PNPT1	98	79.325	ENSMZEG00005027363	PNPT1	98	78.029	Maylandia_zebra
ENSECAG00000020058	PNPT1	98	81.946	ENSMGAG00000001952	PNPT1	98	82.548	Meleagris_gallopavo
ENSECAG00000020058	PNPT1	98	93.099	ENSMAUG00000013652	Pnpt1	99	91.014	Mesocricetus_auratus
ENSECAG00000020058	PNPT1	98	95.359	ENSMICG00000009369	PNPT1	99	94.825	Microcebus_murinus
ENSECAG00000020058	PNPT1	96	94.714	ENSMOCG00000002820	Pnpt1	99	92.655	Microtus_ochrogaster
ENSECAG00000020058	PNPT1	97	75.385	ENSMMOG00000007480	PNPT1	98	75.944	Mola_mola
ENSECAG00000020058	PNPT1	97	86.402	ENSMODG00000001984	PNPT1	99	83.912	Monodelphis_domestica
ENSECAG00000020058	PNPT1	97	79.208	ENSMALG00000018484	PNPT1	97	77.867	Monopterus_albus
ENSECAG00000020058	PNPT1	98	93.380	MGP_CAROLIEiJ_G0016153	Pnpt1	99	92.238	Mus_caroli
ENSECAG00000020058	PNPT1	98	92.807	ENSMUSG00000020464	Pnpt1	99	91.591	Mus_musculus
ENSECAG00000020058	PNPT1	97	93.732	MGP_PahariEiJ_G0016737	Pnpt1	99	92.238	Mus_pahari
ENSECAG00000020058	PNPT1	98	93.380	MGP_SPRETEiJ_G0016996	Pnpt1	99	92.963	Mus_spretus
ENSECAG00000020058	PNPT1	97	95.355	ENSMPUG00000002353	PNPT1	99	95.355	Mustela_putorius_furo
ENSECAG00000020058	PNPT1	97	93.943	ENSMLUG00000003886	PNPT1	99	93.943	Myotis_lucifugus
ENSECAG00000020058	PNPT1	97	93.790	ENSNGAG00000020856	-	99	93.790	Nannospalax_galili
ENSECAG00000020058	PNPT1	84	68.525	ENSNBRG00000012517	PNPT1	87	76.796	Neolamprologus_brichardi
ENSECAG00000020058	PNPT1	89	85.965	ENSNLEG00000003327	-	98	83.247	Nomascus_leucogenys
ENSECAG00000020058	PNPT1	98	91.961	ENSNLEG00000009354	PNPT1	99	91.462	Nomascus_leucogenys
ENSECAG00000020058	PNPT1	98	90.550	ENSOPRG00000010232	-	99	90.686	Ochotona_princeps
ENSECAG00000020058	PNPT1	97	93.020	ENSODEG00000012137	PNPT1	99	91.850	Octodon_degus
ENSECAG00000020058	PNPT1	98	79.184	ENSONIG00000000983	PNPT1	93	79.917	Oreochromis_niloticus
ENSECAG00000020058	PNPT1	97	86.648	ENSOANG00000011178	PNPT1	98	87.446	Ornithorhynchus_anatinus
ENSECAG00000020058	PNPT1	97	94.968	ENSOCUG00000006889	PNPT1	99	94.968	Oryctolagus_cuniculus
ENSECAG00000020058	PNPT1	97	79.066	ENSORLG00000004335	PNPT1	92	79.287	Oryzias_latipes
ENSECAG00000020058	PNPT1	97	79.208	ENSORLG00015018951	PNPT1	99	79.666	Oryzias_latipes_hsok
ENSECAG00000020058	PNPT1	98	91.469	ENSOGAG00000009840	PNPT1	99	91.528	Otolemur_garnettii
ENSECAG00000020058	PNPT1	97	94.574	ENSOARG00000002164	PNPT1	99	94.574	Ovis_aries
ENSECAG00000020058	PNPT1	98	76.761	ENSPPAG00000040514	-	98	75.938	Pan_paniscus
ENSECAG00000020058	PNPT1	88	95.095	ENSPPAG00000024705	PNPT1	99	95.185	Pan_paniscus
ENSECAG00000020058	PNPT1	98	97.046	ENSPPRG00000001366	PNPT1	100	96.939	Panthera_pardus
ENSECAG00000020058	PNPT1	98	97.320	ENSPTIG00000014915	PNPT1	99	97.187	Panthera_tigris_altaica
ENSECAG00000020058	PNPT1	98	76.197	ENSPTRG00000051411	-	98	75.754	Pan_troglodytes
ENSECAG00000020058	PNPT1	98	95.346	ENSPTRG00000011934	PNPT1	99	94.825	Pan_troglodytes
ENSECAG00000020058	PNPT1	98	95.487	ENSPANG00000022846	PNPT1	99	94.955	Papio_anubis
ENSECAG00000020058	PNPT1	97	79.491	ENSPKIG00000021612	PNPT1	99	76.912	Paramormyrops_kingsleyae
ENSECAG00000020058	PNPT1	97	84.322	ENSPSIG00000013120	PNPT1	97	83.671	Pelodiscus_sinensis
ENSECAG00000020058	PNPT1	98	93.230	ENSPEMG00000004284	Pnpt1	99	92.139	Peromyscus_maniculatus_bairdii
ENSECAG00000020058	PNPT1	96	74.006	ENSPMAG00000008932	PNPT1	98	74.105	Petromyzon_marinus
ENSECAG00000020058	PNPT1	97	86.525	ENSPCIG00000010236	PNPT1	99	84.884	Phascolarctos_cinereus
ENSECAG00000020058	PNPT1	98	78.762	ENSPFOG00000010229	PNPT1	98	77.646	Poecilia_formosa
ENSECAG00000020058	PNPT1	98	78.903	ENSPLAG00000009008	PNPT1	98	77.778	Poecilia_latipinna
ENSECAG00000020058	PNPT1	98	78.762	ENSPMEG00000004192	PNPT1	98	79.509	Poecilia_mexicana
ENSECAG00000020058	PNPT1	98	78.371	ENSPREG00000003072	PNPT1	98	79.358	Poecilia_reticulata
ENSECAG00000020058	PNPT1	98	94.915	ENSPPYG00000012399	PNPT1	99	94.049	Pongo_abelii
ENSECAG00000020058	PNPT1	97	82.194	ENSPCAG00000010806	PNPT1	98	82.893	Procavia_capensis
ENSECAG00000020058	PNPT1	98	81.972	ENSPCOG00000015664	PNPT1	99	82.353	Propithecus_coquereli
ENSECAG00000020058	PNPT1	78	92.991	ENSPVAG00000005379	PNPT1	88	83.133	Pteropus_vampyrus
ENSECAG00000020058	PNPT1	97	77.119	ENSPNYG00000000363	PNPT1	98	76.287	Pundamilia_nyererei
ENSECAG00000020058	PNPT1	98	80.704	ENSPNAG00000010891	PNPT1	98	79.161	Pygocentrus_nattereri
ENSECAG00000020058	PNPT1	97	93.305	ENSRNOG00000003600	Pnpt1	99	91.721	Rattus_norvegicus
ENSECAG00000020058	PNPT1	98	95.205	ENSRBIG00000043016	PNPT1	99	94.696	Rhinopithecus_bieti
ENSECAG00000020058	PNPT1	98	95.063	ENSRROG00000040537	PNPT1	99	94.567	Rhinopithecus_roxellana
ENSECAG00000020058	PNPT1	98	93.156	ENSSBOG00000032574	PNPT1	98	94.805	Saimiri_boliviensis_boliviensis
ENSECAG00000020058	PNPT1	67	87.680	ENSSHAG00000014040	PNPT1	98	87.992	Sarcophilus_harrisii
ENSECAG00000020058	PNPT1	97	71.004	ENSSFOG00015017596	PNPT1	94	72.045	Scleropages_formosus
ENSECAG00000020058	PNPT1	97	77.542	ENSSMAG00000018471	PNPT1	98	77.222	Scophthalmus_maximus
ENSECAG00000020058	PNPT1	98	79.267	ENSSDUG00000018584	PNPT1	95	79.781	Seriola_dumerili
ENSECAG00000020058	PNPT1	98	79.126	ENSSLDG00000023385	PNPT1	98	78.107	Seriola_lalandi_dorsalis
ENSECAG00000020058	PNPT1	84	86.122	ENSSARG00000012819	PNPT1	86	86.420	Sorex_araneus
ENSECAG00000020058	PNPT1	98	81.408	ENSSPUG00000011785	PNPT1	99	78.194	Sphenodon_punctatus
ENSECAG00000020058	PNPT1	98	77.075	ENSSPAG00000016880	PNPT1	98	76.283	Stegastes_partitus
ENSECAG00000020058	PNPT1	97	94.825	ENSSSCG00000031882	PNPT1	99	94.825	Sus_scrofa
ENSECAG00000020058	PNPT1	98	82.228	ENSTGUG00000006908	PNPT1	98	82.893	Taeniopygia_guttata
ENSECAG00000020058	PNPT1	95	77.233	ENSTRUG00000005495	PNPT1	96	75.358	Takifugu_rubripes
ENSECAG00000020058	PNPT1	95	76.724	ENSTNIG00000007460	PNPT1	98	76.744	Tetraodon_nigroviridis
ENSECAG00000020058	PNPT1	98	63.613	ENSTBEG00000010788	PNPT1	99	63.355	Tupaia_belangeri
ENSECAG00000020058	PNPT1	98	95.781	ENSTTRG00000000029	PNPT1	98	95.828	Tursiops_truncatus
ENSECAG00000020058	PNPT1	91	95.288	ENSUAMG00000017133	PNPT1	99	95.157	Ursus_americanus
ENSECAG00000020058	PNPT1	99	95.443	ENSUMAG00000018844	PNPT1	99	95.443	Ursus_maritimus
ENSECAG00000020058	PNPT1	97	86.693	ENSVPAG00000007097	PNPT1	99	86.693	Vicugna_pacos
ENSECAG00000020058	PNPT1	97	95.213	ENSVVUG00000010034	PNPT1	99	95.213	Vulpes_vulpes
ENSECAG00000020058	PNPT1	97	80.650	ENSXETG00000006075	pnpt1	93	81.395	Xenopus_tropicalis
ENSECAG00000020058	PNPT1	98	78.622	ENSXCOG00000013381	PNPT1	97	79.722	Xiphophorus_couchianus
ENSECAG00000020058	PNPT1	97	79.202	ENSXMAG00000016907	PNPT1	98	79.722	Xiphophorus_maculatus