EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000020262 (Gene tree)
Gene ID: 100065026
Gene Symbol: CNOT4
Alias: -
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 135732 bases
Position: chr4:89668119-89803850
Accession: 16677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000032919	RRM_1	PF00076.22	1.2e-05	1	1
ENSECAP00000033914	RRM_1	PF00076.22	1.5e-05	1	1
ENSECAP00000017971	RRM_1	PF00076.22	1.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000055494	-	2021	-	ENSECAP00000033914	642 (aa)	XP_023495515	UPI0003ACD80F
ENSECAT00000021792	-	2320	-	ENSECAP00000017971	713 (aa)	XP_023495513	F7DZW7
ENSECAT00000056640	-	1820	-	ENSECAP00000032919	575 (aa)	XP_023495517	UPI0003ACA242

Gene Model

Click here to download ENSECAG00000020262's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000020262's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000020262	CNOT4	100	98.910	ENSG00000080802	CNOT4	100	98.910	Homo_sapiens
ENSECAG00000020262	CNOT4	94	89.299	ENSAPOG00000016272	cnot4a	84	89.299	Acanthochromis_polyacanthus
ENSECAG00000020262	CNOT4	97	98.261	ENSAMEG00000012081	CNOT4	92	98.174	Ailuropoda_melanoleuca
ENSECAG00000020262	CNOT4	100	67.273	ENSACIG00000003011	cnot4a	100	60.843	Amphilophus_citrinellus
ENSECAG00000020262	CNOT4	100	74.962	ENSAOCG00000010792	cnot4a	100	74.809	Amphiprion_ocellaris
ENSECAG00000020262	CNOT4	100	74.962	ENSAPEG00000004680	cnot4a	100	74.809	Amphiprion_percula
ENSECAG00000020262	CNOT4	99	88.930	ENSATEG00000017580	cnot4a	92	88.930	Anabas_testudineus
ENSECAG00000020262	CNOT4	100	88.320	ENSAPLG00000016441	CNOT4	100	88.320	Anas_platyrhynchos
ENSECAG00000020262	CNOT4	100	88.189	ENSACAG00000011154	CNOT4	100	88.189	Anolis_carolinensis
ENSECAG00000020262	CNOT4	100	98.287	ENSANAG00000032156	CNOT4	100	98.287	Aotus_nancymaae
ENSECAG00000020262	CNOT4	100	88.321	ENSACLG00000002514	cnot4a	92	88.321	Astatotilapia_calliptera
ENSECAG00000020262	CNOT4	100	72.363	ENSAMXG00000011473	cnot4b	100	72.305	Astyanax_mexicanus
ENSECAG00000020262	CNOT4	100	72.755	ENSAMXG00000001373	cnot4a	100	71.842	Astyanax_mexicanus
ENSECAG00000020262	CNOT4	100	98.957	ENSBTAG00000017919	CNOT4	100	98.957	Bos_taurus
ENSECAG00000020262	CNOT4	100	98.287	ENSCJAG00000012532	CNOT4	100	98.287	Callithrix_jacchus
ENSECAG00000020262	CNOT4	100	99.065	ENSCAFG00000003223	CNOT4	100	99.065	Canis_familiaris
ENSECAG00000020262	CNOT4	100	98.609	ENSCAFG00020000093	CNOT4	100	98.609	Canis_lupus_dingo
ENSECAG00000020262	CNOT4	100	98.435	ENSCHIG00000010955	CNOT4	100	98.435	Capra_hircus
ENSECAG00000020262	CNOT4	100	98.754	ENSTSYG00000000893	CNOT4	100	98.754	Carlito_syrichta
ENSECAG00000020262	CNOT4	99	98.039	ENSCAPG00000006213	CNOT4	100	95.483	Cavia_aperea
ENSECAG00000020262	CNOT4	100	98.287	ENSCPOG00000011526	CNOT4	100	98.287	Cavia_porcellus
ENSECAG00000020262	CNOT4	100	98.957	ENSCCAG00000024414	CNOT4	100	98.957	Cebus_capucinus
ENSECAG00000020262	CNOT4	100	98.957	ENSCATG00000022607	CNOT4	100	98.957	Cercocebus_atys
ENSECAG00000020262	CNOT4	100	97.819	ENSCLAG00000001857	CNOT4	100	97.819	Chinchilla_lanigera
ENSECAG00000020262	CNOT4	100	98.177	ENSCSAG00000009096	CNOT4	100	98.177	Chlorocebus_sabaeus
ENSECAG00000020262	CNOT4	68	99.465	ENSCHOG00000010412	CNOT4	63	99.465	Choloepus_hoffmanni
ENSECAG00000020262	CNOT4	100	95.512	ENSCPBG00000004959	CNOT4	100	95.512	Chrysemys_picta_bellii
ENSECAG00000020262	CNOT4	100	98.754	ENSCANG00000029319	CNOT4	100	98.754	Colobus_angolensis_palliatus
ENSECAG00000020262	CNOT4	100	98.957	ENSCGRG00001014651	Cnot4	100	98.957	Cricetulus_griseus_chok1gshd
ENSECAG00000020262	CNOT4	100	98.754	ENSCGRG00000005727	Cnot4	100	98.754	Cricetulus_griseus_crigri
ENSECAG00000020262	CNOT4	95	89.299	ENSCSEG00000015080	cnot4a	84	89.299	Cynoglossus_semilaevis
ENSECAG00000020262	CNOT4	100	88.321	ENSCVAG00000009399	cnot4a	100	73.668	Cyprinodon_variegatus
ENSECAG00000020262	CNOT4	100	69.816	ENSDARG00000007045	cnot4a	100	69.330	Danio_rerio
ENSECAG00000020262	CNOT4	100	69.159	ENSDARG00000007639	cnot4b	100	66.255	Danio_rerio
ENSECAG00000020262	CNOT4	100	97.756	ENSDNOG00000009409	CNOT4	100	97.756	Dasypus_novemcinctus
ENSECAG00000020262	CNOT4	100	98.783	ENSDORG00000012268	Cnot4	100	98.783	Dipodomys_ordii
ENSECAG00000020262	CNOT4	100	92.567	ENSETEG00000013407	CNOT4	89	95.089	Echinops_telfairi
ENSECAG00000020262	CNOT4	100	100.000	ENSEASG00005014430	CNOT4	100	100.000	Equus_asinus_asinus
ENSECAG00000020262	CNOT4	99	90.637	ENSELUG00000008742	cnot4a	90	90.637	Esox_lucius
ENSECAG00000020262	CNOT4	100	73.235	ENSELUG00000011540	cnot4b	97	71.508	Esox_lucius
ENSECAG00000020262	CNOT4	100	98.609	ENSFCAG00000011904	CNOT4	100	98.609	Felis_catus
ENSECAG00000020262	CNOT4	100	88.451	ENSFALG00000011194	CNOT4	100	88.451	Ficedula_albicollis
ENSECAG00000020262	CNOT4	100	99.130	ENSFDAG00000013525	CNOT4	100	99.130	Fukomys_damarensis
ENSECAG00000020262	CNOT4	94	88.321	ENSFHEG00000006608	cnot4a	100	73.141	Fundulus_heteroclitus
ENSECAG00000020262	CNOT4	96	59.899	ENSGMOG00000001329	cnot4a	98	60.409	Gadus_morhua
ENSECAG00000020262	CNOT4	100	94.670	ENSGALG00000011682	CNOT4	100	94.670	Gallus_gallus
ENSECAG00000020262	CNOT4	100	72.743	ENSGACG00000004276	cnot4a	100	70.817	Gasterosteus_aculeatus
ENSECAG00000020262	CNOT4	100	94.951	ENSGAGG00000017331	CNOT4	100	94.951	Gopherus_agassizii
ENSECAG00000020262	CNOT4	96	94.653	ENSGGOG00000000142	CNOT4	99	97.844	Gorilla_gorilla
ENSECAG00000020262	CNOT4	100	88.321	ENSHBUG00000000027	cnot4a	92	88.321	Haplochromis_burtoni
ENSECAG00000020262	CNOT4	100	99.130	ENSHGLG00000011533	CNOT4	100	99.130	Heterocephalus_glaber_female
ENSECAG00000020262	CNOT4	100	99.130	ENSHGLG00100013058	CNOT4	100	99.130	Heterocephalus_glaber_male
ENSECAG00000020262	CNOT4	99	87.226	ENSHCOG00000015815	cnot4a	92	87.226	Hippocampus_comes
ENSECAG00000020262	CNOT4	100	70.545	ENSIPUG00000016994	cnot4b	100	70.103	Ictalurus_punctatus
ENSECAG00000020262	CNOT4	100	72.121	ENSIPUG00000006393	cnot4	100	71.667	Ictalurus_punctatus
ENSECAG00000020262	CNOT4	100	98.435	ENSSTOG00000007717	CNOT4	100	98.435	Ictidomys_tridecemlineatus
ENSECAG00000020262	CNOT4	100	80.696	ENSJJAG00000019991	-	100	80.696	Jaculus_jaculus
ENSECAG00000020262	CNOT4	100	98.087	ENSJJAG00000016618	Cnot4	100	98.087	Jaculus_jaculus
ENSECAG00000020262	CNOT4	94	89.299	ENSKMAG00000004581	cnot4a	100	72.492	Kryptolebias_marmoratus
ENSECAG00000020262	CNOT4	100	66.667	ENSLBEG00000009999	cnot4a	100	66.625	Labrus_bergylta
ENSECAG00000020262	CNOT4	100	83.694	ENSLACG00000002647	CNOT4	99	83.694	Latimeria_chalumnae
ENSECAG00000020262	CNOT4	100	78.137	ENSLOCG00000016126	cnot4a	100	77.490	Lepisosteus_oculatus
ENSECAG00000020262	CNOT4	100	97.335	ENSLAFG00000000709	CNOT4	100	97.335	Loxodonta_africana
ENSECAG00000020262	CNOT4	100	98.910	ENSMFAG00000046349	CNOT4	100	98.910	Macaca_fascicularis
ENSECAG00000020262	CNOT4	100	98.957	ENSMMUG00000016181	CNOT4	100	98.957	Macaca_mulatta
ENSECAG00000020262	CNOT4	100	98.738	ENSMNEG00000042164	CNOT4	100	98.738	Macaca_nemestrina
ENSECAG00000020262	CNOT4	100	98.910	ENSMLEG00000032709	CNOT4	100	98.910	Mandrillus_leucophaeus
ENSECAG00000020262	CNOT4	99	89.299	ENSMAMG00000023194	cnot4a	92	89.299	Mastacembelus_armatus
ENSECAG00000020262	CNOT4	100	88.321	ENSMZEG00005007312	cnot4a	92	88.321	Maylandia_zebra
ENSECAG00000020262	CNOT4	100	88.189	ENSMGAG00000011788	CNOT4	100	88.189	Meleagris_gallopavo
ENSECAG00000020262	CNOT4	100	98.957	ENSMAUG00000020415	Cnot4	100	98.957	Mesocricetus_auratus
ENSECAG00000020262	CNOT4	100	99.304	ENSMICG00000001667	CNOT4	100	99.304	Microcebus_murinus
ENSECAG00000020262	CNOT4	100	98.783	ENSMOCG00000020955	Cnot4	100	98.783	Microtus_ochrogaster
ENSECAG00000020262	CNOT4	94	75.592	ENSMMOG00000014565	cnot4a	97	74.875	Mola_mola
ENSECAG00000020262	CNOT4	100	95.792	ENSMODG00000014068	CNOT4	100	95.792	Monodelphis_domestica
ENSECAG00000020262	CNOT4	94	89.299	ENSMALG00000011662	cnot4a	81	89.299	Monopterus_albus
ENSECAG00000020262	CNOT4	100	98.614	MGP_CAROLIEiJ_G0028217	Cnot4	100	98.614	Mus_caroli
ENSECAG00000020262	CNOT4	100	98.783	ENSMUSG00000038784	Cnot4	100	98.783	Mus_musculus
ENSECAG00000020262	CNOT4	100	98.783	MGP_PahariEiJ_G0021974	Cnot4	100	98.783	Mus_pahari
ENSECAG00000020262	CNOT4	100	98.435	MGP_SPRETEiJ_G0029216	Cnot4	100	98.435	Mus_spretus
ENSECAG00000020262	CNOT4	100	98.177	ENSMPUG00000004089	CNOT4	100	98.177	Mustela_putorius_furo
ENSECAG00000020262	CNOT4	100	99.065	ENSMLUG00000008260	CNOT4	100	99.065	Myotis_lucifugus
ENSECAG00000020262	CNOT4	100	98.609	ENSNGAG00000015030	Cnot4	100	98.609	Nannospalax_galili
ENSECAG00000020262	CNOT4	100	71.729	ENSNBRG00000021144	cnot4a	100	71.579	Neolamprologus_brichardi
ENSECAG00000020262	CNOT4	100	98.598	ENSNLEG00000013352	CNOT4	100	98.598	Nomascus_leucogenys
ENSECAG00000020262	CNOT4	97	79.855	ENSOPRG00000001023	CNOT4	90	79.855	Ochotona_princeps
ENSECAG00000020262	CNOT4	100	98.435	ENSODEG00000012975	CNOT4	100	98.435	Octodon_degus
ENSECAG00000020262	CNOT4	100	88.321	ENSONIG00000008656	cnot4a	92	88.321	Oreochromis_niloticus
ENSECAG00000020262	CNOT4	100	94.545	ENSOANG00000005006	CNOT4	100	94.545	Ornithorhynchus_anatinus
ENSECAG00000020262	CNOT4	100	98.036	ENSOCUG00000013448	CNOT4	100	98.036	Oryctolagus_cuniculus
ENSECAG00000020262	CNOT4	100	73.435	ENSORLG00000003727	cnot4a	100	72.214	Oryzias_latipes
ENSECAG00000020262	CNOT4	100	73.182	ENSORLG00020015684	cnot4a	100	72.576	Oryzias_latipes_hni
ENSECAG00000020262	CNOT4	100	73.588	ENSORLG00015008470	cnot4a	100	72.977	Oryzias_latipes_hsok
ENSECAG00000020262	CNOT4	100	72.519	ENSOMEG00000011084	cnot4a	100	72.214	Oryzias_melastigma
ENSECAG00000020262	CNOT4	100	98.878	ENSOGAG00000015499	CNOT4	100	98.878	Otolemur_garnettii
ENSECAG00000020262	CNOT4	100	98.317	ENSOARG00000008803	CNOT4	100	98.317	Ovis_aries
ENSECAG00000020262	CNOT4	100	98.609	ENSPPAG00000041937	CNOT4	100	98.609	Pan_paniscus
ENSECAG00000020262	CNOT4	100	99.304	ENSPPRG00000023940	CNOT4	100	99.304	Panthera_pardus
ENSECAG00000020262	CNOT4	100	98.609	ENSPTIG00000016601	CNOT4	100	98.609	Panthera_tigris_altaica
ENSECAG00000020262	CNOT4	100	98.754	ENSPTRG00000019727	CNOT4	100	98.754	Pan_troglodytes
ENSECAG00000020262	CNOT4	100	98.783	ENSPANG00000017724	CNOT4	100	98.783	Papio_anubis
ENSECAG00000020262	CNOT4	100	72.291	ENSPKIG00000018137	cnot4a	100	71.981	Paramormyrops_kingsleyae
ENSECAG00000020262	CNOT4	100	87.680	ENSPSIG00000011256	CNOT4	100	87.680	Pelodiscus_sinensis
ENSECAG00000020262	CNOT4	100	73.193	ENSPMGG00000005671	cnot4a	100	73.042	Periophthalmus_magnuspinnatus
ENSECAG00000020262	CNOT4	100	98.783	ENSPEMG00000021566	Cnot4	100	98.783	Peromyscus_maniculatus_bairdii
ENSECAG00000020262	CNOT4	100	95.794	ENSPCIG00000029622	CNOT4	96	95.372	Phascolarctos_cinereus
ENSECAG00000020262	CNOT4	100	63.393	ENSPFOG00000002228	cnot4a	100	60.024	Poecilia_formosa
ENSECAG00000020262	CNOT4	100	73.485	ENSPLAG00000001780	cnot4a	100	72.879	Poecilia_latipinna
ENSECAG00000020262	CNOT4	100	73.485	ENSPMEG00000006852	cnot4a	100	72.879	Poecilia_mexicana
ENSECAG00000020262	CNOT4	100	71.891	ENSPREG00000008171	cnot4a	100	70.950	Poecilia_reticulata
ENSECAG00000020262	CNOT4	100	97.896	ENSPPYG00000018026	CNOT4	100	97.896	Pongo_abelii
ENSECAG00000020262	CNOT4	100	99.065	ENSPCOG00000019907	CNOT4	100	99.065	Propithecus_coquereli
ENSECAG00000020262	CNOT4	97	96.522	ENSPVAG00000004905	CNOT4	90	96.522	Pteropus_vampyrus
ENSECAG00000020262	CNOT4	100	88.321	ENSPNYG00000004276	cnot4a	92	88.321	Pundamilia_nyererei
ENSECAG00000020262	CNOT4	100	75.519	ENSPNAG00000008679	cnot4b	100	73.669	Pygocentrus_nattereri
ENSECAG00000020262	CNOT4	99	91.513	ENSPNAG00000020433	cnot4a	91	91.513	Pygocentrus_nattereri
ENSECAG00000020262	CNOT4	100	97.055	ENSRNOG00000010795	Cnot4	100	97.055	Rattus_norvegicus
ENSECAG00000020262	CNOT4	100	98.957	ENSRBIG00000043977	CNOT4	100	98.957	Rhinopithecus_bieti
ENSECAG00000020262	CNOT4	100	98.087	ENSSBOG00000020808	CNOT4	100	98.087	Saimiri_boliviensis_boliviensis
ENSECAG00000020262	CNOT4	100	95.652	ENSSHAG00000013639	CNOT4	100	95.652	Sarcophilus_harrisii
ENSECAG00000020262	CNOT4	99	90.406	ENSSFOG00015002019	cnot4a	91	90.406	Scleropages_formosus
ENSECAG00000020262	CNOT4	99	92.251	ENSSFOG00015017285	CNOT4	91	92.251	Scleropages_formosus
ENSECAG00000020262	CNOT4	100	73.083	ENSSMAG00000008614	cnot4a	92	89.299	Scophthalmus_maximus
ENSECAG00000020262	CNOT4	100	71.275	ENSSDUG00000018585	cnot4b	100	71.472	Seriola_dumerili
ENSECAG00000020262	CNOT4	99	89.299	ENSSDUG00000022635	cnot4a	92	89.299	Seriola_dumerili
ENSECAG00000020262	CNOT4	99	89.299	ENSSLDG00000015770	cnot4a	92	89.299	Seriola_lalandi_dorsalis
ENSECAG00000020262	CNOT4	100	63.725	ENSSLDG00000014347	cnot4b	100	57.947	Seriola_lalandi_dorsalis
ENSECAG00000020262	CNOT4	100	95.327	ENSSPUG00000004677	CNOT4	100	95.327	Sphenodon_punctatus
ENSECAG00000020262	CNOT4	99	89.299	ENSSPAG00000012329	cnot4a	92	89.299	Stegastes_partitus
ENSECAG00000020262	CNOT4	100	99.130	ENSSSCG00000021354	CNOT4	100	99.130	Sus_scrofa
ENSECAG00000020262	CNOT4	100	88.583	ENSTGUG00000009161	CNOT4	100	88.583	Taeniopygia_guttata
ENSECAG00000020262	CNOT4	100	82.508	ENSTRUG00000016861	cnot4a	100	71.729	Takifugu_rubripes
ENSECAG00000020262	CNOT4	100	71.003	ENSTNIG00000016000	cnot4a	100	70.325	Tetraodon_nigroviridis
ENSECAG00000020262	CNOT4	94	96.863	ENSTBEG00000002202	CNOT4	86	93.304	Tupaia_belangeri
ENSECAG00000020262	CNOT4	97	98.119	ENSTTRG00000005122	CNOT4	90	98.119	Tursiops_truncatus
ENSECAG00000020262	CNOT4	100	99.304	ENSUAMG00000026759	CNOT4	100	99.304	Ursus_americanus
ENSECAG00000020262	CNOT4	100	99.304	ENSUMAG00000015351	CNOT4	100	99.304	Ursus_maritimus
ENSECAG00000020262	CNOT4	100	99.304	ENSVVUG00000006200	CNOT4	100	99.304	Vulpes_vulpes
ENSECAG00000020262	CNOT4	100	98.182	ENSXETG00000010594	cnot4	90	98.182	Xenopus_tropicalis
ENSECAG00000020262	CNOT4	94	72.222	ENSXCOG00000020824	cnot4a	98	71.189	Xiphophorus_couchianus
ENSECAG00000020262	CNOT4	100	72.474	ENSXMAG00000016984	cnot4a	100	71.253	Xiphophorus_maculatus