EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSECAG00000020387 (Gene tree)
Gene ID: 100629889
Gene Symbol: MRPS18C
Alias: -
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Equus_caballus
Status: putative
Strand: Minus strand
Length: 4405 bases
Position: chr3:55191091-55195495
Accession: 51212
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSECAP00000034117	Ribosomal_S18	PF01084.20	1.1e-22	1	1
ENSECAP00000017828	Ribosomal_S18	PF01084.20	1.3e-22	1	1
ENSECAP00000033448	Ribosomal_S18	PF01084.20	2.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSECAT00000059557	-	396	-	ENSECAP00000034117	131 (aa)	-	-
ENSECAT00000053749	-	312	-	ENSECAP00000033448	103 (aa)	-	-
ENSECAT00000021636	-	429	-	ENSECAP00000017828	142 (aa)	-	F7CJA2

Gene Model

Click here to download ENSECAG00000020387's gene model file

Pathways

Pathway ID	Pathway Name	Source
ecb03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000020387's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSECAG00000020387	MRPS18C	100	86.806	ENSG00000163319	MRPS18C	100	86.806	Homo_sapiens
ENSECAG00000020387	MRPS18C	100	85.816	ENSAMEG00000004915	MRPS18C	100	85.816	Ailuropoda_melanoleuca
ENSECAG00000020387	MRPS18C	99	74.667	ENSANAG00000025323	-	95	74.667	Aotus_nancymaae
ENSECAG00000020387	MRPS18C	100	75.694	ENSANAG00000028055	-	100	75.694	Aotus_nancymaae
ENSECAG00000020387	MRPS18C	100	84.615	ENSBTAG00000018155	MRPS18C	100	84.615	Bos_taurus
ENSECAG00000020387	MRPS18C	100	76.923	ENSBTAG00000049836	-	100	76.923	Bos_taurus
ENSECAG00000020387	MRPS18C	100	86.806	ENSCJAG00000042247	MRPS18C	97	86.806	Callithrix_jacchus
ENSECAG00000020387	MRPS18C	100	88.811	ENSCAFG00020010491	MRPS18C	100	88.811	Canis_lupus_dingo
ENSECAG00000020387	MRPS18C	91	91.473	ENSCHIG00000004461	-	90	91.473	Capra_hircus
ENSECAG00000020387	MRPS18C	75	74.766	ENSCHIG00000019359	-	98	74.766	Capra_hircus
ENSECAG00000020387	MRPS18C	100	77.273	ENSCHIG00000022740	-	100	77.273	Capra_hircus
ENSECAG00000020387	MRPS18C	100	72.381	ENSCHIG00000016551	-	100	72.381	Capra_hircus
ENSECAG00000020387	MRPS18C	99	71.329	ENSCHIG00000018805	-	99	71.329	Capra_hircus
ENSECAG00000020387	MRPS18C	100	85.315	ENSTSYG00000012924	MRPS18C	100	85.315	Carlito_syrichta
ENSECAG00000020387	MRPS18C	100	84.722	ENSCPOG00000009198	MRPS18C	100	84.722	Cavia_porcellus
ENSECAG00000020387	MRPS18C	100	84.028	ENSCCAG00000019347	-	100	84.028	Cebus_capucinus
ENSECAG00000020387	MRPS18C	99	75.573	ENSCCAG00000025155	-	95	75.573	Cebus_capucinus
ENSECAG00000020387	MRPS18C	100	75.000	ENSCCAG00000028283	-	100	75.000	Cebus_capucinus
ENSECAG00000020387	MRPS18C	100	86.111	ENSCCAG00000026577	-	100	86.111	Cebus_capucinus
ENSECAG00000020387	MRPS18C	100	88.194	ENSCATG00000040697	MRPS18C	100	88.194	Cercocebus_atys
ENSECAG00000020387	MRPS18C	100	84.247	ENSCLAG00000008205	-	100	84.247	Chinchilla_lanigera
ENSECAG00000020387	MRPS18C	100	84.028	ENSCLAG00000017397	-	100	84.028	Chinchilla_lanigera
ENSECAG00000020387	MRPS18C	100	77.622	ENSCANG00000041165	-	100	77.622	Colobus_angolensis_palliatus
ENSECAG00000020387	MRPS18C	100	88.194	ENSCANG00000038907	MRPS18C	100	88.194	Colobus_angolensis_palliatus
ENSECAG00000020387	MRPS18C	100	70.085	ENSCANG00000037347	-	100	70.085	Colobus_angolensis_palliatus
ENSECAG00000020387	MRPS18C	100	85.417	ENSCGRG00001000103	Mrps18c	100	85.417	Cricetulus_griseus_chok1gshd
ENSECAG00000020387	MRPS18C	100	85.417	ENSCGRG00000002192	Mrps18c	100	85.417	Cricetulus_griseus_crigri
ENSECAG00000020387	MRPS18C	99	83.803	ENSDORG00000012749	Mrps18c	100	83.803	Dipodomys_ordii
ENSECAG00000020387	MRPS18C	100	58.451	ENSETEG00000012223	-	100	58.451	Echinops_telfairi
ENSECAG00000020387	MRPS18C	100	99.296	ENSEASG00005013234	MRPS18C	100	99.296	Equus_asinus_asinus
ENSECAG00000020387	MRPS18C	100	63.636	ENSEEUG00000003504	MRPS18C	99	63.636	Erinaceus_europaeus
ENSECAG00000020387	MRPS18C	100	90.909	ENSFCAG00000042464	MRPS18C	100	90.909	Felis_catus
ENSECAG00000020387	MRPS18C	100	85.417	ENSFDAG00000000250	-	100	85.417	Fukomys_damarensis
ENSECAG00000020387	MRPS18C	100	72.727	ENSFDAG00000008778	-	100	72.727	Fukomys_damarensis
ENSECAG00000020387	MRPS18C	100	66.372	ENSGGOG00000037903	-	100	66.372	Gorilla_gorilla
ENSECAG00000020387	MRPS18C	100	72.222	ENSGGOG00000008603	MRPS18C	100	72.222	Gorilla_gorilla
ENSECAG00000020387	MRPS18C	100	73.451	ENSGGOG00000040785	-	100	73.451	Gorilla_gorilla
ENSECAG00000020387	MRPS18C	100	79.021	ENSHGLG00000012671	-	98	79.021	Heterocephalus_glaber_female
ENSECAG00000020387	MRPS18C	100	81.250	ENSHGLG00000020134	-	100	81.250	Heterocephalus_glaber_female
ENSECAG00000020387	MRPS18C	100	84.932	ENSHGLG00000002953	-	100	84.932	Heterocephalus_glaber_female
ENSECAG00000020387	MRPS18C	100	81.250	ENSHGLG00100019678	-	100	81.250	Heterocephalus_glaber_male
ENSECAG00000020387	MRPS18C	100	84.932	ENSHGLG00100016235	-	100	84.932	Heterocephalus_glaber_male
ENSECAG00000020387	MRPS18C	100	79.021	ENSHGLG00100015568	-	98	79.021	Heterocephalus_glaber_male
ENSECAG00000020387	MRPS18C	100	86.014	ENSSTOG00000007989	MRPS18C	100	86.014	Ictidomys_tridecemlineatus
ENSECAG00000020387	MRPS18C	100	76.923	ENSJJAG00000022437	Mrps18c	100	76.923	Jaculus_jaculus
ENSECAG00000020387	MRPS18C	100	84.722	ENSLAFG00000001059	MRPS18C	100	84.722	Loxodonta_africana
ENSECAG00000020387	MRPS18C	100	86.806	ENSMFAG00000003991	MRPS18C	100	86.806	Macaca_fascicularis
ENSECAG00000020387	MRPS18C	100	69.444	ENSMFAG00000041276	-	100	69.444	Macaca_fascicularis
ENSECAG00000020387	MRPS18C	100	75.000	ENSMMUG00000039146	-	100	75.000	Macaca_mulatta
ENSECAG00000020387	MRPS18C	100	80.556	ENSMMUG00000048717	-	100	80.556	Macaca_mulatta
ENSECAG00000020387	MRPS18C	100	74.138	ENSMMUG00000015353	MRPS18C	100	74.138	Macaca_mulatta
ENSECAG00000020387	MRPS18C	100	67.133	ENSMNEG00000018700	-	100	67.133	Macaca_nemestrina
ENSECAG00000020387	MRPS18C	100	86.806	ENSMNEG00000043663	MRPS18C	100	86.806	Macaca_nemestrina
ENSECAG00000020387	MRPS18C	100	88.194	ENSMLEG00000038884	MRPS18C	100	88.194	Mandrillus_leucophaeus
ENSECAG00000020387	MRPS18C	100	69.231	ENSMICG00000037615	-	100	69.231	Microcebus_murinus
ENSECAG00000020387	MRPS18C	100	84.722	ENSMICG00000032609	-	100	84.722	Microcebus_murinus
ENSECAG00000020387	MRPS18C	100	81.818	ENSMOCG00000009898	-	100	81.818	Microtus_ochrogaster
ENSECAG00000020387	MRPS18C	100	83.217	ENSMOCG00000015591	-	100	83.217	Microtus_ochrogaster
ENSECAG00000020387	MRPS18C	97	75.524	ENSMODG00000020773	MRPS18C	99	75.524	Monodelphis_domestica
ENSECAG00000020387	MRPS18C	100	83.448	MGP_CAROLIEiJ_G0027458	Mrps18c	100	83.448	Mus_caroli
ENSECAG00000020387	MRPS18C	100	81.379	ENSMUSG00000016833	Mrps18c	100	81.379	Mus_musculus
ENSECAG00000020387	MRPS18C	100	84.138	MGP_PahariEiJ_G0017236	Mrps18c	100	84.138	Mus_pahari
ENSECAG00000020387	MRPS18C	83	80.992	MGP_SPRETEiJ_G0028455	Mrps18c	93	80.992	Mus_spretus
ENSECAG00000020387	MRPS18C	100	83.217	ENSMLUG00000017057	MRPS18C	100	83.217	Myotis_lucifugus
ENSECAG00000020387	MRPS18C	86	88.618	ENSNGAG00000015980	Mrps18c	100	83.916	Nannospalax_galili
ENSECAG00000020387	MRPS18C	100	79.861	ENSNLEG00000018188	-	100	79.861	Nomascus_leucogenys
ENSECAG00000020387	MRPS18C	100	88.194	ENSNLEG00000009119	MRPS18C	100	88.194	Nomascus_leucogenys
ENSECAG00000020387	MRPS18C	68	78.571	ENSOPRG00000004113	MRPS18C	68	78.571	Ochotona_princeps
ENSECAG00000020387	MRPS18C	100	82.877	ENSODEG00000007599	-	100	82.877	Octodon_degus
ENSECAG00000020387	MRPS18C	100	84.028	ENSODEG00000020349	-	100	84.028	Octodon_degus
ENSECAG00000020387	MRPS18C	100	86.713	ENSOARG00000002770	MRPS18C	100	86.713	Ovis_aries
ENSECAG00000020387	MRPS18C	100	68.142	ENSPPAG00000037400	-	100	68.142	Pan_paniscus
ENSECAG00000020387	MRPS18C	100	86.806	ENSPPAG00000037122	MRPS18C	100	86.806	Pan_paniscus
ENSECAG00000020387	MRPS18C	100	90.210	ENSPPRG00000011089	MRPS18C	100	90.210	Panthera_pardus
ENSECAG00000020387	MRPS18C	100	89.510	ENSPTIG00000021242	MRPS18C	100	89.510	Panthera_tigris_altaica
ENSECAG00000020387	MRPS18C	100	86.806	ENSPTRG00000016233	MRPS18C	100	86.806	Pan_troglodytes
ENSECAG00000020387	MRPS18C	100	69.643	ENSPTRG00000047058	-	100	69.643	Pan_troglodytes
ENSECAG00000020387	MRPS18C	100	87.500	ENSPANG00000033931	MRPS18C	100	87.500	Papio_anubis
ENSECAG00000020387	MRPS18C	100	75.000	ENSPANG00000034202	-	100	75.000	Papio_anubis
ENSECAG00000020387	MRPS18C	100	83.916	ENSPEMG00000008390	Mrps18c	100	83.916	Peromyscus_maniculatus_bairdii
ENSECAG00000020387	MRPS18C	79	75.000	ENSPCIG00000000097	-	80	75.000	Phascolarctos_cinereus
ENSECAG00000020387	MRPS18C	72	91.176	ENSPCIG00000019737	-	100	91.176	Phascolarctos_cinereus
ENSECAG00000020387	MRPS18C	99	75.000	ENSPCIG00000005376	-	100	75.000	Phascolarctos_cinereus
ENSECAG00000020387	MRPS18C	100	88.194	ENSPPYG00000025867	MRPS18C	100	88.194	Pongo_abelii
ENSECAG00000020387	MRPS18C	99	81.818	ENSPPYG00000025835	-	100	81.818	Pongo_abelii
ENSECAG00000020387	MRPS18C	100	81.250	ENSPCAG00000004975	MRPS18C	100	81.250	Procavia_capensis
ENSECAG00000020387	MRPS18C	100	85.417	ENSPCOG00000017634	MRPS18C	100	85.417	Propithecus_coquereli
ENSECAG00000020387	MRPS18C	68	83.673	ENSPVAG00000006439	MRPS18C	100	83.673	Pteropus_vampyrus
ENSECAG00000020387	MRPS18C	100	80.000	ENSRNOG00000002178	Mrps18c	100	80.000	Rattus_norvegicus
ENSECAG00000020387	MRPS18C	100	73.394	ENSRBIG00000031637	-	100	73.394	Rhinopithecus_bieti
ENSECAG00000020387	MRPS18C	100	83.333	ENSRBIG00000035023	-	100	83.333	Rhinopithecus_bieti
ENSECAG00000020387	MRPS18C	100	88.194	ENSRBIG00000041685	MRPS18C	100	88.194	Rhinopithecus_bieti
ENSECAG00000020387	MRPS18C	100	72.477	ENSRROG00000030722	-	100	72.477	Rhinopithecus_roxellana
ENSECAG00000020387	MRPS18C	100	88.194	ENSRROG00000044334	MRPS18C	100	88.194	Rhinopithecus_roxellana
ENSECAG00000020387	MRPS18C	100	83.333	ENSRROG00000033834	-	100	83.333	Rhinopithecus_roxellana
ENSECAG00000020387	MRPS18C	100	86.111	ENSSBOG00000027568	-	100	86.111	Saimiri_boliviensis_boliviensis
ENSECAG00000020387	MRPS18C	100	69.697	ENSSBOG00000029234	-	100	69.697	Saimiri_boliviensis_boliviensis
ENSECAG00000020387	MRPS18C	99	69.718	ENSSBOG00000032292	-	100	69.718	Saimiri_boliviensis_boliviensis
ENSECAG00000020387	MRPS18C	99	78.322	ENSSBOG00000022205	-	92	78.322	Saimiri_boliviensis_boliviensis
ENSECAG00000020387	MRPS18C	92	78.102	ENSSHAG00000007084	MRPS18C	94	78.102	Sarcophilus_harrisii
ENSECAG00000020387	MRPS18C	100	90.210	ENSSSCG00000038042	MRPS18C	100	90.210	Sus_scrofa
ENSECAG00000020387	MRPS18C	100	83.333	ENSTBEG00000012505	MRPS18C	100	83.333	Tupaia_belangeri
ENSECAG00000020387	MRPS18C	100	91.608	ENSTTRG00000004897	MRPS18C	100	91.608	Tursiops_truncatus
ENSECAG00000020387	MRPS18C	100	93.706	ENSUAMG00000012878	MRPS18C	100	93.706	Ursus_americanus
ENSECAG00000020387	MRPS18C	100	93.706	ENSUMAG00000008829	MRPS18C	100	93.706	Ursus_maritimus
ENSECAG00000020387	MRPS18C	100	88.112	ENSVPAG00000011358	MRPS18C	100	88.112	Vicugna_pacos
ENSECAG00000020387	MRPS18C	100	89.510	ENSVVUG00000015672	MRPS18C	100	89.510	Vulpes_vulpes