EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSECAG00000020885 (Gene tree)
Gene ID
100065444
Gene Symbol
CSDE1
Alias
-
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Equus_caballus
Status
putative
Strand
Plus strand
Length
27150 bases
Position
chr5:50590589-50617738
Accession
16894
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSECAP00000018826CSDPF00313.223.5e-8515
ENSECAP00000018826CSDPF00313.223.5e-8525
ENSECAP00000018826CSDPF00313.223.5e-8535
ENSECAP00000018826CSDPF00313.223.5e-8545
ENSECAP00000018826CSDPF00313.223.5e-8555
ENSECAP00000025545CSDPF00313.224e-8515
ENSECAP00000025545CSDPF00313.224e-8525
ENSECAP00000025545CSDPF00313.224e-8535
ENSECAP00000025545CSDPF00313.224e-8545
ENSECAP00000025545CSDPF00313.224e-8555
ENSECAP00000044082CSDPF00313.225.7e-8415
ENSECAP00000044082CSDPF00313.225.7e-8425
ENSECAP00000044082CSDPF00313.225.7e-8435
ENSECAP00000044082CSDPF00313.225.7e-8445
ENSECAP00000044082CSDPF00313.225.7e-8455
ENSECAP00000018787CSDPF00313.221.5e-7815
ENSECAP00000018787CSDPF00313.221.5e-7825
ENSECAP00000018787CSDPF00313.221.5e-7835
ENSECAP00000018787CSDPF00313.221.5e-7845
ENSECAP00000018787CSDPF00313.221.5e-7855
ENSECAP00000023264CSDPF00313.227.8e-7414
ENSECAP00000023264CSDPF00313.227.8e-7424
ENSECAP00000023264CSDPF00313.227.8e-7434
ENSECAP00000023264CSDPF00313.227.8e-7444
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSECAT00000060667-2864-ENSECAP00000044082762 (aa)--
ENSECAT00000046323-2581-ENSECAP00000023264720 (aa)--
ENSECAT00000022716-2637-ENSECAP00000018787749 (aa)-F6WG01
ENSECAT00000022763-3008-ENSECAP00000018826807 (aa)XP_001917791F6QY89
ENSECAT00000038764-2972-ENSECAP00000025545798 (aa)XP_001917800UPI00017961F0
Gene Model
Click here to download ENSECAG00000020885's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSECAG00000020885's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSECAG00000020885CSDE110099.123ENSG00000009307CSDE1100100.000Homo_sapiens
ENSECAG00000020885CSDE19978.042ENSAPOG00000015538csde110078.182Acanthochromis_polyacanthus
ENSECAG00000020885CSDE110097.174ENSAMEG00000017129CSDE110097.174Ailuropoda_melanoleuca
ENSECAG00000020885CSDE19277.297ENSACIG00000015175csde110077.297Amphilophus_citrinellus
ENSECAG00000020885CSDE19978.042ENSAOCG00000011510csde110078.312Amphiprion_ocellaris
ENSECAG00000020885CSDE110077.903ENSAPEG00000007194csde110078.312Amphiprion_percula
ENSECAG00000020885CSDE19977.622ENSATEG00000003864csde110077.922Anabas_testudineus
ENSECAG00000020885CSDE19991.433ENSAPLG00000008797CSDE110092.047Anas_platyrhynchos
ENSECAG00000020885CSDE110092.231ENSACAG00000003120CSDE110092.231Anolis_carolinensis
ENSECAG00000020885CSDE110098.747ENSANAG00000024665CSDE110097.909Aotus_nancymaae
ENSECAG00000020885CSDE18873.050ENSANAG00000028396-9173.810Aotus_nancymaae
ENSECAG00000020885CSDE110077.375ENSACLG00000013296csde110077.763Astatotilapia_calliptera
ENSECAG00000020885CSDE19977.235ENSAMXG00000007436csde110077.432Astyanax_mexicanus
ENSECAG00000020885CSDE110098.747ENSBTAG00000000678CSDE110098.696Bos_taurus
ENSECAG00000020885CSDE110098.872ENSCJAG00000012565CSDE110098.032Callithrix_jacchus
ENSECAG00000020885CSDE19898.371ENSCAFG00000009618CSDE110098.371Canis_familiaris
ENSECAG00000020885CSDE19999.157ENSCAFG00020000481CSDE110099.218Canis_lupus_dingo
ENSECAG00000020885CSDE110098.747ENSCHIG00000017250CSDE110098.696Capra_hircus
ENSECAG00000020885CSDE110098.747ENSTSYG00000003747CSDE110098.747Carlito_syrichta
ENSECAG00000020885CSDE110092.398ENSCAPG00000015128CSDE110092.398Cavia_aperea
ENSECAG00000020885CSDE110093.860ENSCPOG00000040388CSDE110093.860Cavia_porcellus
ENSECAG00000020885CSDE19576.485ENSCCAG00000033677-9976.010Cebus_capucinus
ENSECAG00000020885CSDE19773.719ENSCCAG00000030878-9173.719Cebus_capucinus
ENSECAG00000020885CSDE110098.872ENSCCAG00000036794CSDE110098.872Cebus_capucinus
ENSECAG00000020885CSDE110099.123ENSCATG00000036962CSDE110098.278Cercocebus_atys
ENSECAG00000020885CSDE110099.123ENSCLAG00000006618CSDE110099.123Chinchilla_lanigera
ENSECAG00000020885CSDE110099.123ENSCSAG00000001658CSDE110094.668Chlorocebus_sabaeus
ENSECAG00000020885CSDE110099.298ENSCHOG00000000918CSDE18999.298Choloepus_hoffmanni
ENSECAG00000020885CSDE110092.732ENSCPBG00000016547CSDE110092.732Chrysemys_picta_bellii
ENSECAG00000020885CSDE19743.399ENSCING00000014465-9643.399Ciona_intestinalis
ENSECAG00000020885CSDE19642.999ENSCSAVG00000008100-9842.999Ciona_savignyi
ENSECAG00000020885CSDE19993.186ENSCANG00000031069-10093.053Colobus_angolensis_palliatus
ENSECAG00000020885CSDE110099.123ENSCANG00000035096CSDE110098.155Colobus_angolensis_palliatus
ENSECAG00000020885CSDE110098.496ENSCGRG00001016833-10098.496Cricetulus_griseus_chok1gshd
ENSECAG00000020885CSDE19980.478ENSCGRG00001014011-10081.486Cricetulus_griseus_chok1gshd
ENSECAG00000020885CSDE19798.441ENSCGRG00000002225-10098.441Cricetulus_griseus_crigri
ENSECAG00000020885CSDE110085.217ENSCGRG00000005831-10085.217Cricetulus_griseus_crigri
ENSECAG00000020885CSDE19977.451ENSCSEG00000002620csde110077.633Cynoglossus_semilaevis
ENSECAG00000020885CSDE110077.000ENSCVAG00000001344csde110077.143Cyprinodon_variegatus
ENSECAG00000020885CSDE110078.277ENSDARG00000074758csde110078.277Danio_rerio
ENSECAG00000020885CSDE19998.317ENSDNOG00000010287-9795.149Dasypus_novemcinctus
ENSECAG00000020885CSDE17770.722ENSDNOG00000034464-10073.913Dasypus_novemcinctus
ENSECAG00000020885CSDE110097.995ENSDORG00000011609Csde110098.054Dipodomys_ordii
ENSECAG00000020885CSDE19748.361FBgn0263352Unr7350.450Drosophila_melanogaster
ENSECAG00000020885CSDE18468.543ENSETEG00000007109-9968.543Echinops_telfairi
ENSECAG00000020885CSDE19976.826ENSETEG00000013678-9977.154Echinops_telfairi
ENSECAG00000020885CSDE19084.945ENSETEG00000006280-10087.184Echinops_telfairi
ENSECAG00000020885CSDE19498.347ENSETEG00000002491-8098.347Echinops_telfairi
ENSECAG00000020885CSDE19956.143ENSEBUG00000008647csde19954.405Eptatretus_burgeri
ENSECAG00000020885CSDE1100100.000ENSEASG00005006284CSDE1100100.000Equus_asinus_asinus
ENSECAG00000020885CSDE19399.476ENSEEUG00000006286CSDE17499.476Erinaceus_europaeus
ENSECAG00000020885CSDE19975.766ENSELUG00000015507csde110076.197Esox_lucius
ENSECAG00000020885CSDE110099.499ENSFCAG00000029266CSDE110099.478Felis_catus
ENSECAG00000020885CSDE110092.105ENSFALG00000003407CSDE110092.105Ficedula_albicollis
ENSECAG00000020885CSDE110098.622ENSFDAG00000007882CSDE110098.653Fukomys_damarensis
ENSECAG00000020885CSDE110077.154ENSFHEG00000010799csde110077.154Fundulus_heteroclitus
ENSECAG00000020885CSDE19977.222ENSGMOG00000012731csde110077.222Gadus_morhua
ENSECAG00000020885CSDE19892.327ENSGALG00000002139CSDE19892.327Gallus_gallus
ENSECAG00000020885CSDE19176.539ENSGAFG00000005241csde19576.829Gambusia_affinis
ENSECAG00000020885CSDE19978.125ENSGACG00000004544csde110078.125Gasterosteus_aculeatus
ENSECAG00000020885CSDE110092.356ENSGAGG00000017685CSDE110092.356Gopherus_agassizii
ENSECAG00000020885CSDE110099.123ENSGGOG00000002164CSDE110099.087Gorilla_gorilla
ENSECAG00000020885CSDE110076.741ENSHBUG00000020315csde110077.763Haplochromis_burtoni
ENSECAG00000020885CSDE19689.978ENSHGLG00000010039-10089.978Heterocephalus_glaber_female
ENSECAG00000020885CSDE110089.348ENSHGLG00000009620-10089.614Heterocephalus_glaber_female
ENSECAG00000020885CSDE19989.045ENSHGLG00000003829-10089.700Heterocephalus_glaber_female
ENSECAG00000020885CSDE19884.986ENSHGLG00000007471-9885.414Heterocephalus_glaber_female
ENSECAG00000020885CSDE19980.176ENSHGLG00000000650-9980.176Heterocephalus_glaber_female
ENSECAG00000020885CSDE19989.307ENSHGLG00000008555-10089.222Heterocephalus_glaber_female
ENSECAG00000020885CSDE110082.331ENSHGLG00000019549-10082.331Heterocephalus_glaber_female
ENSECAG00000020885CSDE19984.481ENSHGLG00100002245-9984.481Heterocephalus_glaber_male
ENSECAG00000020885CSDE19882.153ENSHGLG00100007287-9882.786Heterocephalus_glaber_male
ENSECAG00000020885CSDE19283.988ENSHGLG00100004195-10084.100Heterocephalus_glaber_male
ENSECAG00000020885CSDE19782.183ENSHGLG00100004833-10082.183Heterocephalus_glaber_male
ENSECAG00000020885CSDE19979.102ENSHGLG00100001846-10080.208Heterocephalus_glaber_male
ENSECAG00000020885CSDE110098.872ENSHGLG00100019438-10098.872Heterocephalus_glaber_male
ENSECAG00000020885CSDE19983.287ENSHGLG00100012072-10084.355Heterocephalus_glaber_male
ENSECAG00000020885CSDE19689.755ENSHGLG00100006910-10089.755Heterocephalus_glaber_male
ENSECAG00000020885CSDE110076.375ENSHCOG00000004158csde110076.723Hippocampus_comes
ENSECAG00000020885CSDE19977.235ENSIPUG00000000355csde110077.302Ictalurus_punctatus
ENSECAG00000020885CSDE19280.860ENSSTOG00000032722-9882.056Ictidomys_tridecemlineatus
ENSECAG00000020885CSDE110080.149ENSSTOG00000030994-10080.691Ictidomys_tridecemlineatus
ENSECAG00000020885CSDE110098.246ENSJJAG00000019571Csde110098.246Jaculus_jaculus
ENSECAG00000020885CSDE110077.019ENSKMAG00000005685csde110076.638Kryptolebias_marmoratus
ENSECAG00000020885CSDE19977.762ENSLBEG00000014770csde110077.922Labrus_bergylta
ENSECAG00000020885CSDE110080.273ENSLACG00000018452CSDE19480.273Latimeria_chalumnae
ENSECAG00000020885CSDE110080.476ENSLOCG00000010413csde19480.476Lepisosteus_oculatus
ENSECAG00000020885CSDE19997.331ENSLAFG00000007150CSDE19697.147Loxodonta_africana
ENSECAG00000020885CSDE110099.123ENSMFAG00000003674CSDE110099.087Macaca_fascicularis
ENSECAG00000020885CSDE110099.123ENSMMUG00000001974CSDE110099.087Macaca_mulatta
ENSECAG00000020885CSDE110099.123ENSMNEG00000045247CSDE110098.278Macaca_nemestrina
ENSECAG00000020885CSDE110098.872ENSMLEG00000038673CSDE110098.032Mandrillus_leucophaeus
ENSECAG00000020885CSDE19978.462ENSMAMG00000008821csde110078.701Mastacembelus_armatus
ENSECAG00000020885CSDE110077.375ENSMZEG00005021675csde110077.763Maylandia_zebra
ENSECAG00000020885CSDE19892.199ENSMGAG00000016381CSDE110091.797Meleagris_gallopavo
ENSECAG00000020885CSDE110098.496ENSMAUG00000014031Csde110098.503Mesocricetus_auratus
ENSECAG00000020885CSDE110098.371ENSMICG00000002050CSDE19998.884Microcebus_murinus
ENSECAG00000020885CSDE110098.496ENSMOCG00000018960Csde110098.496Microtus_ochrogaster
ENSECAG00000020885CSDE19977.762ENSMMOG00000015075csde110078.052Mola_mola
ENSECAG00000020885CSDE110096.241ENSMODG00000004685CSDE110096.241Monodelphis_domestica
ENSECAG00000020885CSDE19978.182ENSMALG00000007132csde110078.312Monopterus_albus
ENSECAG00000020885CSDE110098.246MGP_CAROLIEiJ_G0025444Csde110098.246Mus_caroli
ENSECAG00000020885CSDE110098.371ENSMUSG00000068823Csde110098.371Mus_musculus
ENSECAG00000020885CSDE110098.622MGP_PahariEiJ_G0026888Csde110098.622Mus_pahari
ENSECAG00000020885CSDE110098.622MGP_SPRETEiJ_G0026394Csde110098.622Mus_spretus
ENSECAG00000020885CSDE19899.489ENSMPUG00000005753CSDE19999.489Mustela_putorius_furo
ENSECAG00000020885CSDE110097.417ENSMLUG00000005681CSDE110097.417Myotis_lucifugus
ENSECAG00000020885CSDE19771.047ENSNGAG00000012599-10071.047Nannospalax_galili
ENSECAG00000020885CSDE110098.371ENSNGAG00000021929Csde110098.371Nannospalax_galili
ENSECAG00000020885CSDE19977.591ENSNBRG00000020808csde110077.763Neolamprologus_brichardi
ENSECAG00000020885CSDE110098.997ENSNLEG00000004842CSDE110098.155Nomascus_leucogenys
ENSECAG00000020885CSDE19898.058ENSMEUG00000002677CSDE110098.058Notamacropus_eugenii
ENSECAG00000020885CSDE19898.058ENSOPRG00000005002CSDE18894.444Ochotona_princeps
ENSECAG00000020885CSDE19768.142ENSODEG00000005979-9868.142Octodon_degus
ENSECAG00000020885CSDE110098.246ENSODEG00000007383-10098.353Octodon_degus
ENSECAG00000020885CSDE110075.580ENSONIG00000009309csde110075.580Oreochromis_niloticus
ENSECAG00000020885CSDE110080.050ENSOANG00000003346-10080.050Ornithorhynchus_anatinus
ENSECAG00000020885CSDE110098.371ENSOCUG00000016438CSDE110093.602Oryctolagus_cuniculus
ENSECAG00000020885CSDE19977.871ENSORLG00000000707csde110077.893Oryzias_latipes
ENSECAG00000020885CSDE110077.375ENSORLG00020005148csde110075.580Oryzias_latipes_hni
ENSECAG00000020885CSDE110077.375ENSORLG00015019415csde110077.893Oryzias_latipes_hsok
ENSECAG00000020885CSDE110077.903ENSOMEG00000015656csde110078.442Oryzias_melastigma
ENSECAG00000020885CSDE110098.401ENSOGAG00000012127CSDE110098.401Otolemur_garnettii
ENSECAG00000020885CSDE110097.909ENSOARG00000020034CSDE110097.909Ovis_aries
ENSECAG00000020885CSDE110099.123ENSPPAG00000025861CSDE110099.087Pan_paniscus
ENSECAG00000020885CSDE110099.499ENSPPRG00000006747CSDE110098.647Panthera_pardus
ENSECAG00000020885CSDE110099.499ENSPTIG00000015468CSDE110099.499Panthera_tigris_altaica
ENSECAG00000020885CSDE110099.123ENSPTRG00000033721CSDE110099.123Pan_troglodytes
ENSECAG00000020885CSDE110099.123ENSPANG00000018873CSDE110099.087Papio_anubis
ENSECAG00000020885CSDE19977.451ENSPKIG00000009459csde110077.503Paramormyrops_kingsleyae
ENSECAG00000020885CSDE19695.796ENSPSIG00000003823CSDE19794.978Pelodiscus_sinensis
ENSECAG00000020885CSDE19977.343ENSPMGG00000000772csde110077.662Periophthalmus_magnuspinnatus
ENSECAG00000020885CSDE110098.747ENSPEMG00000020357-10098.802Peromyscus_maniculatus_bairdii
ENSECAG00000020885CSDE110096.366ENSPCIG00000022587CSDE110096.366Phascolarctos_cinereus
ENSECAG00000020885CSDE19975.466ENSPFOG00000012664csde110075.932Poecilia_formosa
ENSECAG00000020885CSDE19771.429ENSPLAG00000017680csde19371.429Poecilia_latipinna
ENSECAG00000020885CSDE19871.168ENSPMEG00000005094csde19671.168Poecilia_mexicana
ENSECAG00000020885CSDE110076.522ENSPREG00000011631csde110074.310Poecilia_reticulata
ENSECAG00000020885CSDE110099.248ENSPPYG00000000996CSDE110099.248Pongo_abelii
ENSECAG00000020885CSDE110099.029ENSPCAG00000014368CSDE110092.980Procavia_capensis
ENSECAG00000020885CSDE19083.955ENSPCOG00000008223-9083.955Propithecus_coquereli
ENSECAG00000020885CSDE110098.997ENSPCOG00000017893CSDE110099.087Propithecus_coquereli
ENSECAG00000020885CSDE110092.232ENSPVAG00000008225CSDE110092.232Pteropus_vampyrus
ENSECAG00000020885CSDE110076.741ENSPNYG00000013745csde110077.763Pundamilia_nyererei
ENSECAG00000020885CSDE110077.528ENSPNAG00000001958csde110077.922Pygocentrus_nattereri
ENSECAG00000020885CSDE110098.496ENSRNOG00000061058Csde110098.496Rattus_norvegicus
ENSECAG00000020885CSDE110093.367ENSRBIG00000038966-10092.989Rhinopithecus_bieti
ENSECAG00000020885CSDE110095.238ENSRBIG00000038088-9997.465Rhinopithecus_bieti
ENSECAG00000020885CSDE110099.123ENSRROG00000043101CSDE110098.278Rhinopithecus_roxellana
ENSECAG00000020885CSDE110098.872ENSSBOG00000035592CSDE110098.032Saimiri_boliviensis_boliviensis
ENSECAG00000020885CSDE19995.787ENSSHAG00000009831CSDE110096.089Sarcophilus_harrisii
ENSECAG00000020885CSDE110076.493ENSSFOG00015007498csde110077.243Scleropages_formosus
ENSECAG00000020885CSDE19978.601ENSSMAG00000007203csde110078.701Scophthalmus_maximus
ENSECAG00000020885CSDE19978.042ENSSDUG00000015380csde110078.182Seriola_dumerili
ENSECAG00000020885CSDE110077.778ENSSLDG00000008819csde110078.182Seriola_lalandi_dorsalis
ENSECAG00000020885CSDE19997.893ENSSARG00000000738CSDE110096.192Sorex_araneus
ENSECAG00000020885CSDE110092.105ENSSPUG00000008714CSDE110092.105Sphenodon_punctatus
ENSECAG00000020885CSDE110077.528ENSSPAG00000000716csde110077.922Stegastes_partitus
ENSECAG00000020885CSDE110099.499ENSSSCG00000006752CSDE110099.478Sus_scrofa
ENSECAG00000020885CSDE110091.125ENSTGUG00000000972CSDE110091.125Taeniopygia_guttata
ENSECAG00000020885CSDE19974.370ENSTRUG00000007996csde110074.902Takifugu_rubripes
ENSECAG00000020885CSDE19381.749ENSTNIG00000010878csde110081.749Tetraodon_nigroviridis
ENSECAG00000020885CSDE19398.718ENSTBEG00000011880-6798.718Tupaia_belangeri
ENSECAG00000020885CSDE110097.663ENSTTRG00000015583CSDE110097.663Tursiops_truncatus
ENSECAG00000020885CSDE19199.023ENSUAMG00000021779-10098.714Ursus_americanus
ENSECAG00000020885CSDE18894.686ENSUAMG00000024289-9994.686Ursus_americanus
ENSECAG00000020885CSDE19993.118ENSUMAG00000009720-9891.310Ursus_maritimus
ENSECAG00000020885CSDE19799.762ENSUMAG00000011714-9999.762Ursus_maritimus
ENSECAG00000020885CSDE110098.592ENSVPAG00000000749CSDE18598.592Vicugna_pacos
ENSECAG00000020885CSDE19099.123ENSVVUG00000009890CSDE19499.123Vulpes_vulpes
ENSECAG00000020885CSDE110086.017ENSXETG00000021448csde110086.017Xenopus_tropicalis
ENSECAG00000020885CSDE19285.455ENSXCOG00000000035csde19985.455Xiphophorus_couchianus
ENSECAG00000020885CSDE110077.750ENSXMAG00000009080csde19878.117Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us